RNA–Protein interactions for RNA: ENST00000477856.1

CNTN3-202, Transcript of contactin 3, humanhuman

TSL 3

Gene CNTN3, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-202ENST00000477856 LINC00158P58513 81 aa2.81□□□□□ -1.96
CNTN3-202ENST00000477856 C9orf116Q5BN46 136 aaPredicted RBP2.81□□□□□ -1.96
CNTN3-202ENST00000477856 Q6ZRP5 223 aa2.81□□□□□ -1.96
CNTN3-202ENST00000477856 DPH3Q96FX2 82 aa2.81□□□□□ -1.96
CNTN3-202ENST00000477856 ANAPC13Q9BS18 74 aa2.81□□□□□ -1.96
CNTN3-202ENST00000477856 DNAH11Q96DT5 4516 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 A0A087WYN8 130 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 IGKV2D-26A0A0A0MRZ7 120 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 A0A0J9YXY3 114 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 A0A0U1RQV1 116 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 TIMM17BO60830 172 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 CHTF8P0CG12 524 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 SMIM13P0DJ93 91 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 SCGB1D4Q6XE38 83 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 SCXQ7RTU7 201 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 COPS9Q8WXC6 57 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 MIEN1Q9BRT3 115 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 VAMP8Q9BV40 100 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 PLAC8Q9NZF1 115 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 PKHD1P08F94 4074 aa2.8□□□□□ -1.96
CNTN3-202ENST00000477856 EPM2AB3EWF7 344 aa2.79□□□□□ -1.96
CNTN3-202ENST00000477856 PANO1I0J062 215 aa2.79□□□□□ -1.96
CNTN3-202ENST00000477856 HSD52Q0P140 79 aa2.79□□□□□ -1.96
CNTN3-202ENST00000477856 C9orf129Q5T035 196 aaKnown RBP2.79□□□□□ -1.96
CNTN3-202ENST00000477856 HRCT1Q6UXD1 115 aa2.79□□□□□ -1.96
CNTN3-202ENST00000477856 GTF2H5Q6ZYL4 71 aa2.79□□□□□ -1.96
CNTN3-202ENST00000477856 MIR7-3HGQ8N6C7 128 aa2.79□□□□□ -1.96
CNTN3-202ENST00000477856 CIRBP-AS1Q8TBR5 109 aa2.79□□□□□ -1.96
CNTN3-202ENST00000477856 C7orf33Q8WU49 177 aa2.79□□□□□ -1.96
CNTN3-202ENST00000477856 SND1-IT1Q9HBX3 110 aa2.79□□□□□ -1.96
CNTN3-202ENST00000477856 XAGE1AQ9HD64 81 aa2.79□□□□□ -1.96
CNTN3-202ENST00000477856 TP73-AS1Q9UF72 201 aa2.79□□□□□ -1.96
CNTN3-202ENST00000477856 PAM16Q9Y3D7 125 aa2.79□□□□□ -1.96
CNTN3-202ENST00000477856 IGLV5-37A0A075B6J1 123 aa2.78□□□□□ -1.96
CNTN3-202ENST00000477856 NDUFC2O95298 119 aa2.78□□□□□ -1.96
CNTN3-202ENST00000477856 COX8AP10176 69 aa2.78□□□□□ -1.96
CNTN3-202ENST00000477856 SPATA45Q537H7 98 aa2.78□□□□□ -1.96
CNTN3-202ENST00000477856 PCP2Q8IVA1 136 aa2.78□□□□□ -1.96
CNTN3-202ENST00000477856 NKAPP1Q8N9T2 125 aa2.78□□□□□ -1.96
CNTN3-202ENST00000477856 TTTY13Q9BZ97 58 aa2.78□□□□□ -1.96
CNTN3-202ENST00000477856 EPPK1P58107 5090 aaKnown RBP2.77□□□□□ -1.97
CNTN3-202ENST00000477856 LOC107984156A0A0G2JMH3 177 aa2.77□□□□□ -1.97
CNTN3-202ENST00000477856 FAM168BA1KXE4 195 aa2.77□□□□□ -1.97
CNTN3-202ENST00000477856 A6NDN8 102 aa2.77□□□□□ -1.97
CNTN3-202ENST00000477856 J3QR89 54 aa2.77□□□□□ -1.97
CNTN3-202ENST00000477856 IFITM1P13164 125 aa2.77□□□□□ -1.97
CNTN3-202ENST00000477856 HAMPP81172 84 aa2.77□□□□□ -1.97
CNTN3-202ENST00000477856 BATFQ16520 125 aa2.77□□□□□ -1.97
CNTN3-202ENST00000477856 SLC25A34Q6PIV7 304 aa2.77□□□□□ -1.97
CNTN3-202ENST00000477856 Q6ZVQ6 151 aa2.77□□□□□ -1.97
CNTN3-202ENST00000477856 ARL17AQ8IVW1 177 aa2.77□□□□□ -1.97
CNTN3-202ENST00000477856 LITAFQ99732 161 aa2.77□□□□□ -1.97
CNTN3-202ENST00000477856 NAA38Q9BRA0 125 aaKnown RBP2.77□□□□□ -1.97
CNTN3-202ENST00000477856 SPANXDQ9BXN6 97 aa2.77□□□□□ -1.97
CNTN3-202ENST00000477856 DNAH5Q8TE73 4624 aa2.77□□□□□ -1.97
CNTN3-202ENST00000477856 TRBV10-2A0A0K0K1G8 114 aa2.76□□□□□ -1.97
CNTN3-202ENST00000477856 A0A1W2PNN7 141 aa2.76□□□□□ -1.97
CNTN3-202ENST00000477856 C8orf87E5RJ46 101 aa2.76□□□□□ -1.97
CNTN3-202ENST00000477856 M0R378 163 aa2.76□□□□□ -1.97
CNTN3-202ENST00000477856 IGKV2-30P06310 120 aa2.76□□□□□ -1.97
CNTN3-202ENST00000477856 SEC61BP60468 96 aaKnown RBP2.76□□□□□ -1.97
CNTN3-202ENST00000477856 UBE2BP63146 152 aa2.76□□□□□ -1.97
CNTN3-202ENST00000477856 SRSF9Q13242 221 aaKnown RBP eCLIP2.76□□□□□ -1.97
CNTN3-202ENST00000477856 ADAMTSL4-AS1Q5T5F5 129 aa2.76□□□□□ -1.97
CNTN3-202ENST00000477856 Q5XG85 94 aa2.76□□□□□ -1.97
CNTN3-202ENST00000477856 PHF5AQ7RTV0 110 aaKnown RBP2.76□□□□□ -1.97
CNTN3-202ENST00000477856 DAND5Q8N907 189 aa2.76□□□□□ -1.97
CNTN3-202ENST00000477856 LINC00308Q8TCZ7 52 aa2.76□□□□□ -1.97
CNTN3-202ENST00000477856 HIGD1BQ9P298 99 aa2.76□□□□□ -1.97
CNTN3-202ENST00000477856 C22orf24Q9Y442 160 aa2.76□□□□□ -1.97
CNTN3-202ENST00000477856 CCDC179H3BU77 68 aa2.75□□□□□ -1.97
CNTN3-202ENST00000477856 SMR3BP02814 79 aaPredicted RBP2.75□□□□□ -1.97
CNTN3-202ENST00000477856 RPL37AP61513 92 aaKnown RBP2.75□□□□□ -1.97
CNTN3-202ENST00000477856 Q5VSD8 79 aa2.75□□□□□ -1.97
CNTN3-202ENST00000477856 KRTAP7-1Q8IUC3 87 aa2.75□□□□□ -1.97
CNTN3-202ENST00000477856 ANKRD29Q8N6D5 301 aa2.75□□□□□ -1.97
CNTN3-202ENST00000477856 LINC00167Q96N53 147 aa2.75□□□□□ -1.97
CNTN3-202ENST00000477856 HIST1H4GQ99525 98 aa2.75□□□□□ -1.97
CNTN3-202ENST00000477856 UQCR10Q9UDW1 63 aa2.75□□□□□ -1.97
CNTN3-202ENST00000477856 DYNC1H1Q14204 4646 aaKnown RBP2.75□□□□□ -1.97
CNTN3-202ENST00000477856 LRP1BQ9NZR2 4599 aa2.75□□□□□ -1.97
CNTN3-202ENST00000477856 IGLV1-50A0A075B6I6 118 aa2.74□□□□□ -1.97
CNTN3-202ENST00000477856 A0A1B0GWB2 263 aa2.74□□□□□ -1.97
CNTN3-202ENST00000477856 NCR3O14931 201 aa2.74□□□□□ -1.97
CNTN3-202ENST00000477856 HNRNPA3P51991 378 aaKnown RBP2.74□□□□□ -1.97
CNTN3-202ENST00000477856 NPC2P61916 151 aa2.74□□□□□ -1.97
CNTN3-202ENST00000477856 PRR3P79522 188 aaKnown RBP2.74□□□□□ -1.97
CNTN3-202ENST00000477856 S100A7L2Q5SY68 101 aa2.74□□□□□ -1.97
CNTN3-202ENST00000477856 SOSTDC1Q6X4U4 206 aa2.74□□□□□ -1.97
CNTN3-202ENST00000477856 IGKV2-28A0A075B6P5 120 aa2.73□□□□□ -1.97
CNTN3-202ENST00000477856 TRAV13-2A0A0B4J235 113 aa2.73□□□□□ -1.97
CNTN3-202ENST00000477856 RPL37AP8A6NKH3 93 aa2.73□□□□□ -1.97
CNTN3-202ENST00000477856 BCE1O60756 84 aa2.73□□□□□ -1.97
CNTN3-202ENST00000477856 IGKV2D-28P01615 120 aa2.73□□□□□ -1.97
CNTN3-202ENST00000477856 IGLV6-57P01721 117 aa2.73□□□□□ -1.97
CNTN3-202ENST00000477856 KRTAP10-12P60413 245 aa2.73□□□□□ -1.97
CNTN3-202ENST00000477856 C1orf137Q5JT78 98 aa2.73□□□□□ -1.97
CNTN3-202ENST00000477856 LYRM7Q5U5X0 104 aa2.73□□□□□ -1.97
CNTN3-202ENST00000477856 C2orf91Q6ZV80 131 aa2.73□□□□□ -1.97
CNTN3-202ENST00000477856 MUSTN1Q8IVN3 82 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms