RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 IFITM2Q01629 132 aa3.2□□□□□ -1.9
LINC00173-202ENST00000477702 Q1RN00 199 aa3.2□□□□□ -1.9
LINC00173-202ENST00000477702 TMEM126AQ9H061 195 aa3.2□□□□□ -1.9
LINC00173-202ENST00000477702 LINC00846Q9NV44 126 aa3.2□□□□□ -1.9
LINC00173-202ENST00000477702 A0A1B0GXF2 115 aa3.19□□□□□ -1.9
LINC00173-202ENST00000477702 MT2AP02795 61 aa3.19□□□□□ -1.9
LINC00173-202ENST00000477702 GNB1LQ9BYB4 327 aa3.19□□□□□ -1.9
LINC00173-202ENST00000477702 PCP4L1A6NKN8 68 aa3.18□□□□□ -1.9
LINC00173-202ENST00000477702 H3BRM9 83 aa3.18□□□□□ -1.9
LINC00173-202ENST00000477702 M0R378 163 aa3.18□□□□□ -1.9
LINC00173-202ENST00000477702 ATP5LO75964 103 aa3.18□□□□□ -1.9
LINC00173-202ENST00000477702 MOBPQ13875 183 aa3.18□□□□□ -1.9
LINC00173-202ENST00000477702 KRTAP19-6Q3LI70 58 aa3.18□□□□□ -1.9
LINC00173-202ENST00000477702 PDZD11Q5EBL8 140 aa3.18□□□□□ -1.9
LINC00173-202ENST00000477702 COX7B2Q8TF08 81 aa3.18□□□□□ -1.9
LINC00173-202ENST00000477702 SCGB3A1Q96QR1 104 aa3.18□□□□□ -1.9
LINC00173-202ENST00000477702 AMELXQ99217 191 aa3.18□□□□□ -1.9
LINC00173-202ENST00000477702 TIMM17AQ99595 171 aa3.18□□□□□ -1.9
LINC00173-202ENST00000477702 MT1FP04733 61 aa3.17□□□□□ -1.9
LINC00173-202ENST00000477702 RAB5BP61020 215 aa3.17□□□□□ -1.9
LINC00173-202ENST00000477702 ERASQ7Z444 233 aa3.17□□□□□ -1.9
LINC00173-202ENST00000477702 FAM19A3Q7Z5A8 133 aa3.17□□□□□ -1.9
LINC00173-202ENST00000477702 CDKN2A-AS1Q9UH64 79 aa3.17□□□□□ -1.9
LINC00173-202ENST00000477702 TINCRA0A1B0GVN0 87 aa3.16□□□□□ -1.9
LINC00173-202ENST00000477702 IGIPA6NJ69 53 aa3.16□□□□□ -1.9
LINC00173-202ENST00000477702 C9JQL5 133 aa3.16□□□□□ -1.9
LINC00173-202ENST00000477702 S100PP25815 95 aa3.16□□□□□ -1.9
LINC00173-202ENST00000477702 RPS29P62273 56 aaKnown RBP3.16□□□□□ -1.9
LINC00173-202ENST00000477702 SFTA2Q6UW10 78 aa3.16□□□□□ -1.9
LINC00173-202ENST00000477702 TOMM6Q96B49 74 aa3.16□□□□□ -1.9
LINC00173-202ENST00000477702 SMCO4Q9NRQ5 59 aa3.16□□□□□ -1.9
LINC00173-202ENST00000477702 ZNF706Q9Y5V0 76 aaPredicted RBP3.16□□□□□ -1.9
LINC00173-202ENST00000477702 HSBP1L1C9JCN9 74 aa3.15□□□□□ -1.91
LINC00173-202ENST00000477702 NDUFA6P56556 154 aa3.15□□□□□ -1.91
LINC00173-202ENST00000477702 KRTAP10-10P60014 251 aa3.15□□□□□ -1.91
LINC00173-202ENST00000477702 COX17Q14061 63 aa3.15□□□□□ -1.91
LINC00173-202ENST00000477702 PMVKQ15126 192 aa3.15□□□□□ -1.91
LINC00173-202ENST00000477702 COX19Q49B96 90 aa3.15□□□□□ -1.91
LINC00173-202ENST00000477702 FA2HQ7L5A8 372 aa3.15□□□□□ -1.91
LINC00173-202ENST00000477702 TRAV9-1A0A075B6T8 112 aa3.14□□□□□ -1.91
LINC00173-202ENST00000477702 IGLV6-57P01721 117 aa3.14□□□□□ -1.91
LINC00173-202ENST00000477702 SPINK8P0C7L1 97 aa3.14□□□□□ -1.91
LINC00173-202ENST00000477702 PFN2P35080 140 aa3.14□□□□□ -1.91
LINC00173-202ENST00000477702 CXCL6P80162 114 aa3.14□□□□□ -1.91
LINC00173-202ENST00000477702 CST9LQ9H4G1 147 aa3.14□□□□□ -1.91
LINC00173-202ENST00000477702 LINC00587B1AMM8 73 aa3.13□□□□□ -1.91
LINC00173-202ENST00000477702 RPL37P61927 97 aaKnown RBP3.13□□□□□ -1.91
LINC00173-202ENST00000477702 SMCR5Q8TEV8 140 aa3.13□□□□□ -1.91
LINC00173-202ENST00000477702 C12orf57Q99622 126 aa3.13□□□□□ -1.91
LINC00173-202ENST00000477702 KMT2DO14686 5537 aa3.12□□□□□ -1.91
LINC00173-202ENST00000477702 LINC00483Q53H64 154 aa3.12□□□□□ -1.91
LINC00173-202ENST00000477702 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
LINC00173-202ENST00000477702 SSBP3-AS1Q7Z2R9 100 aa3.12□□□□□ -1.91
LINC00173-202ENST00000477702 ERG28Q9UKR5 140 aa3.12□□□□□ -1.91
LINC00173-202ENST00000477702 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
LINC00173-202ENST00000477702 SMIM6P0DI80 62 aa3.11□□□□□ -1.91
LINC00173-202ENST00000477702 LINC00158P58513 81 aa3.11□□□□□ -1.91
LINC00173-202ENST00000477702 FABP9Q0Z7S8 132 aa3.11□□□□□ -1.91
LINC00173-202ENST00000477702 TMEM170BQ5T4T1 132 aa3.11□□□□□ -1.91
LINC00173-202ENST00000477702 Q8NDZ9 215 aa3.11□□□□□ -1.91
LINC00173-202ENST00000477702 SND1-IT1Q9HBX3 110 aa3.11□□□□□ -1.91
LINC00173-202ENST00000477702 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
LINC00173-202ENST00000477702 ADCYAP1P18509 176 aa3.1□□□□□ -1.91
LINC00173-202ENST00000477702 C9orf153Q5TBE3 101 aa3.1□□□□□ -1.91
LINC00173-202ENST00000477702 UQCC3Q6UW78 93 aa3.1□□□□□ -1.91
LINC00173-202ENST00000477702 HRCT1Q6UXD1 115 aa3.1□□□□□ -1.91
LINC00173-202ENST00000477702 SEC11CQ9BY50 192 aa3.1□□□□□ -1.91
LINC00173-202ENST00000477702 ETDCA0A1B0GVM5 59 aa3.09□□□□□ -1.91
LINC00173-202ENST00000477702 LINC01546A6NGU7 62 aa3.09□□□□□ -1.91
LINC00173-202ENST00000477702 ERC2-IT1O76042 136 aa3.09□□□□□ -1.91
LINC00173-202ENST00000477702 LINC00614P0C842 121 aa3.09□□□□□ -1.91
LINC00173-202ENST00000477702 IGLC3P0DOY3 106 aa3.09□□□□□ -1.91
LINC00173-202ENST00000477702 LGALS3P17931 250 aaKnown RBP3.09□□□□□ -1.91
LINC00173-202ENST00000477702 BAGE3Q86Y29 109 aa3.09□□□□□ -1.91
LINC00173-202ENST00000477702 ZNF625Q96I27 306 aaPredicted RBP3.09□□□□□ -1.91
LINC00173-202ENST00000477702 MAP1LC3CQ9BXW4 147 aa3.09□□□□□ -1.91
LINC00173-202ENST00000477702 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.92
LINC00173-202ENST00000477702 HBDP02042 147 aa3.08□□□□□ -1.92
LINC00173-202ENST00000477702 MEIG1Q5JSS6 88 aa3.08□□□□□ -1.92
LINC00173-202ENST00000477702 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
LINC00173-202ENST00000477702 TMEM218A2RU14 115 aa3.07□□□□□ -1.92
LINC00173-202ENST00000477702 ZNF22P17026 224 aaPredicted RBP3.07□□□□□ -1.92
LINC00173-202ENST00000477702 CLLU1Q5K131 121 aa3.07□□□□□ -1.92
LINC00173-202ENST00000477702 BOD1L2Q8IYS8 172 aa3.07□□□□□ -1.92
LINC00173-202ENST00000477702 TRAPPC1Q9Y5R8 145 aa3.07□□□□□ -1.92
LINC00173-202ENST00000477702 MYMXA0A1B0GTQ4 84 aa3.06□□□□□ -1.92
LINC00173-202ENST00000477702 C20orf202A1L168 122 aa3.06□□□□□ -1.92
LINC00173-202ENST00000477702 HINT1P49773 126 aaPredicted RBP3.06□□□□□ -1.92
LINC00173-202ENST00000477702 AKR1D1P51857 326 aa3.06□□□□□ -1.92
LINC00173-202ENST00000477702 JOSD1Q15040 202 aaPredicted RBP3.06□□□□□ -1.92
LINC00173-202ENST00000477702 RHEBQ15382 184 aa3.06□□□□□ -1.92
LINC00173-202ENST00000477702 COMMD7Q86VX2 200 aa3.06□□□□□ -1.92
LINC00173-202ENST00000477702 MIEN1Q9BRT3 115 aa3.06□□□□□ -1.92
LINC00173-202ENST00000477702 LIMD2Q9BT23 127 aa3.06□□□□□ -1.92
LINC00173-202ENST00000477702 C11orf86A6NJI1 115 aa3.05□□□□□ -1.92
LINC00173-202ENST00000477702 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
LINC00173-202ENST00000477702 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
LINC00173-202ENST00000477702 KCNQ1DNQ9H478 68 aa3.05□□□□□ -1.92
LINC00173-202ENST00000477702 TRAV12-1A0A0B4J245 112 aa3.04□□□□□ -1.92
LINC00173-202ENST00000477702 A0A1B0GV90 55 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms