RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 TM2D3Q9BRN9 247 aa13.47□□□□□ -0.25
TMED4-204ENST00000477639 TRBV7-4A0A0J9YYF1 115 aa13.47□□□□□ -0.25
TMED4-204ENST00000477639 TLX1NBP0CAT3 122 aa13.47□□□□□ -0.25
TMED4-204ENST00000477639 SERTAD4-AS1Q5TG53 156 aa13.46□□□□□ -0.25
TMED4-204ENST00000477639 FAM19A1Q7Z5A9 133 aa13.46□□□□□ -0.25
TMED4-204ENST00000477639 KCNQ1DNQ9H478 68 aa13.45□□□□□ -0.26
TMED4-204ENST00000477639 CRYGAP11844 174 aa13.43□□□□□ -0.26
TMED4-204ENST00000477639 CASC10Q5T4H9 136 aa13.43□□□□□ -0.26
TMED4-204ENST00000477639 SERP2Q8N6R1 65 aa13.43□□□□□ -0.26
TMED4-204ENST00000477639 C7orf33Q8WU49 177 aa13.43□□□□□ -0.26
TMED4-204ENST00000477639 Q6ZVQ6 151 aa13.43□□□□□ -0.26
TMED4-204ENST00000477639 NKAPP1Q8N9T2 125 aa13.43□□□□□ -0.26
TMED4-204ENST00000477639 PLA2G2DQ9UNK4 145 aa13.43□□□□□ -0.26
TMED4-204ENST00000477639 UPK3BQ9BT76 320 aa13.4□□□□□ -0.26
TMED4-204ENST00000477639 LINC01547P58512 204 aaPredicted RBP13.4□□□□□ -0.27
TMED4-204ENST00000477639 B9D2Q9BPU9 175 aa13.39□□□□□ -0.27
TMED4-204ENST00000477639 DNAH1Q9P2D7 4330 aa13.38□□□□□ -0.27
TMED4-204ENST00000477639 IGLV5-37A0A075B6J1 123 aa13.37□□□□□ -0.27
TMED4-204ENST00000477639 RMI2Q96E14 147 aa13.36□□□□□ -0.27
TMED4-204ENST00000477639 DNAH9Q9NYC9 4486 aa13.36□□□□□ -0.27
TMED4-204ENST00000477639 COL7A1Q02388 2944 aa13.36□□□□□ -0.27
TMED4-204ENST00000477639 HAMPP81172 84 aa13.36□□□□□ -0.27
TMED4-204ENST00000477639 HUWE1Q7Z6Z7 4374 aaKnown RBP13.35□□□□□ -0.27
TMED4-204ENST00000477639 FAM168BA1KXE4 195 aa13.34□□□□□ -0.27
TMED4-204ENST00000477639 CXCL6P80162 114 aa13.34□□□□□ -0.27
TMED4-204ENST00000477639 KRTAP7-1Q8IUC3 87 aa13.33□□□□□ -0.28
TMED4-204ENST00000477639 KRTAP4-16G5E9R7 235 aaPredicted RBP13.32□□□□□ -0.28
TMED4-204ENST00000477639 IGLV1-50A0A075B6I6 118 aa13.32□□□□□ -0.28
TMED4-204ENST00000477639 CYSTM1Q9H1C7 97 aa13.32□□□□□ -0.28
TMED4-204ENST00000477639 RPL37AP8A6NKH3 93 aa13.31□□□□□ -0.28
TMED4-204ENST00000477639 PRYO14603 147 aa13.31□□□□□ -0.28
TMED4-204ENST00000477639 Q8N377 158 aa13.31□□□□□ -0.28
TMED4-204ENST00000477639 SPRR1AP35321 89 aa13.3□□□□□ -0.28
TMED4-204ENST00000477639 SMIM20Q8N5G0 67 aa13.29□□□□□ -0.28
TMED4-204ENST00000477639 DHRS4-AS1Q9P1J3 65 aa13.29□□□□□ -0.28
TMED4-204ENST00000477639 Q6ZRX8 168 aa13.28□□□□□ -0.28
TMED4-204ENST00000477639 BCE1O60756 84 aa13.27□□□□□ -0.28
TMED4-204ENST00000477639 DEFB105AQ8NG35 78 aa13.27□□□□□ -0.29
TMED4-204ENST00000477639 Q9BRP9 147 aa13.27□□□□□ -0.29
TMED4-204ENST00000477639 LOC107984640A0A0U1RRK4 108 aa13.26□□□□□ -0.29
TMED4-204ENST00000477639 IGLV5-48A0A075B6I7 105 aa13.23□□□□□ -0.29
TMED4-204ENST00000477639 ETDCA0A1B0GVM5 59 aa13.23□□□□□ -0.29
TMED4-204ENST00000477639 MRPL55Q7Z7F7 128 aaKnown RBP13.23□□□□□ -0.29
TMED4-204ENST00000477639 SCXQ7RTU7 201 aa13.22□□□□□ -0.29
TMED4-204ENST00000477639 FAM19A5Q7Z5A7 132 aaPredicted RBP13.22□□□□□ -0.29
TMED4-204ENST00000477639 KRTAP1-5Q9BYS1 174 aa13.2□□□□□ -0.3
TMED4-204ENST00000477639 TRAV7A0A075B6U4 112 aa13.19□□□□□ -0.3
TMED4-204ENST00000477639 ST20-AS1Q8NBB2 130 aa13.18□□□□□ -0.3
TMED4-204ENST00000477639 TMEM258P61165 79 aa13.17□□□□□ -0.3
TMED4-204ENST00000477639 TNP2Q05952 138 aa13.16□□□□□ -0.3
TMED4-204ENST00000477639 NREPQ16612 68 aa13.16□□□□□ -0.3
TMED4-204ENST00000477639 ERC2-IT1O76042 136 aa13.15□□□□□ -0.3
TMED4-204ENST00000477639 WWC2-AS2Q96NR7 200 aa13.15□□□□□ -0.3
TMED4-204ENST00000477639 REG3GQ6UW15 175 aa13.13□□□□□ -0.31
TMED4-204ENST00000477639 STAB2Q8WWQ8 2551 aa13.13□□□□□ -0.31
TMED4-204ENST00000477639 C3orf84H3BNL1 204 aa13.12□□□□□ -0.31
TMED4-204ENST00000477639 CNBPP62633 177 aaKnown RBP13.12□□□□□ -0.31
TMED4-204ENST00000477639 C20orf197Q8N268 126 aa13.12□□□□□ -0.31
TMED4-204ENST00000477639 APLNQ9ULZ1 77 aa13.12□□□□□ -0.31
TMED4-204ENST00000477639 A0A1W2PNM2 257 aa13.11□□□□□ -0.31
TMED4-204ENST00000477639 A0A096LNI7 61 aa13.11□□□□□ -0.31
TMED4-204ENST00000477639 A0A1B0GW54 56 aa13.11□□□□□ -0.31
TMED4-204ENST00000477639 C16orf90A8MZG2 172 aa13.1□□□□□ -0.31
TMED4-204ENST00000477639 IGKV4-1P06312 121 aa13.1□□□□□ -0.31
TMED4-204ENST00000477639 UBE2BP63146 152 aa13.1□□□□□ -0.31
TMED4-204ENST00000477639 C1orf137Q5JT78 98 aa13.09□□□□□ -0.31
TMED4-204ENST00000477639 RPS28P62857 69 aaKnown RBP13.09□□□□□ -0.31
TMED4-204ENST00000477639 FUSP35637 526 aaKnown RBP eCLIP13.08□□□□□ -0.32
TMED4-204ENST00000477639 Q8N9L7 120 aa13.08□□□□□ -0.32
TMED4-204ENST00000477639 A0A1W2PNN7 141 aa13.07□□□□□ -0.32
TMED4-204ENST00000477639 J3KT08 172 aa13.07□□□□□ -0.32
TMED4-204ENST00000477639 BPY2O14599 106 aa13.07□□□□□ -0.32
TMED4-204ENST00000477639 PSCAO43653 123 aa13.06□□□□□ -0.32
TMED4-204ENST00000477639 UBE2DNLQ8IWF7 75 aa13.06□□□□□ -0.32
TMED4-204ENST00000477639 DPH3Q96FX2 82 aa13.06□□□□□ -0.32
TMED4-204ENST00000477639 SMIM29Q86T20 159 aa13.05□□□□□ -0.32
TMED4-204ENST00000477639 Q8NBF4 154 aa13.05□□□□□ -0.32
TMED4-204ENST00000477639 IGKV2-24A0A0C4DH68 120 aa13.05□□□□□ -0.32
TMED4-204ENST00000477639 DYNC2H1Q8NCM8 4307 aaKnown RBP13.04□□□□□ -0.32
TMED4-204ENST00000477639 DNAH7Q8WXX0 4024 aa13.03□□□□□ -0.32
TMED4-204ENST00000477639 SPRR4Q96PI1 79 aa13.03□□□□□ -0.32
TMED4-204ENST00000477639 DNAH10Q8IVF4 4471 aa13.03□□□□□ -0.32
TMED4-204ENST00000477639 KLKP1Q107X0 134 aa13.02□□□□□ -0.32
TMED4-204ENST00000477639 C14orf177Q52M58 125 aa13□□□□□ -0.33
TMED4-204ENST00000477639 LYSTQ99698 3801 aa12.99□□□□□ -0.33
TMED4-204ENST00000477639 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.98□□□□□ -0.33
TMED4-204ENST00000477639 H7BZZ5 65 aa12.98□□□□□ -0.33
TMED4-204ENST00000477639 PRLHP81277 87 aa12.96□□□□□ -0.33
TMED4-204ENST00000477639 LINC00476Q8WZB0 136 aa12.96□□□□□ -0.33
TMED4-204ENST00000477639 SNURFQ9Y675 71 aa12.96□□□□□ -0.34
TMED4-204ENST00000477639 CHTF8P0CG12 524 aa12.94□□□□□ -0.34
TMED4-204ENST00000477639 KRTAP11-1Q8IUC1 163 aa12.94□□□□□ -0.34
TMED4-204ENST00000477639 CSMD3Q7Z407 3707 aa12.94□□□□□ -0.34
TMED4-204ENST00000477639 LRCOL1A6NCL2 159 aa12.93□□□□□ -0.34
TMED4-204ENST00000477639 OCR1Q9BZK8 76 aa12.93□□□□□ -0.34
TMED4-204ENST00000477639 F8WEM9 126 aa12.92□□□□□ -0.34
TMED4-204ENST00000477639 OXTP01178 125 aa12.92□□□□□ -0.34
TMED4-204ENST00000477639 PHF5AQ7RTV0 110 aaKnown RBP12.92□□□□□ -0.34
TMED4-204ENST00000477639 STARD9Q9P2P6 4700 aa12.91□□□□□ -0.34
TMED4-204ENST00000477639 IGLV8-61A0A075B6I0 122 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms