RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 ERC2-IT1O76042 136 aa5.51□□□□□ -1.53
PTPRD-209ENST00000477552 FUSP35637 526 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTPRD-209ENST00000477552 HAMPP81172 84 aa5.51□□□□□ -1.53
PTPRD-209ENST00000477552 KRTAP24-1Q3LI83 254 aa5.51□□□□□ -1.53
PTPRD-209ENST00000477552 Q6ZRP5 223 aa5.51□□□□□ -1.53
PTPRD-209ENST00000477552 IGLV5-48A0A075B6I7 105 aa5.5□□□□□ -1.53
PTPRD-209ENST00000477552 ETDCA0A1B0GVM5 59 aa5.5□□□□□ -1.53
PTPRD-209ENST00000477552 RPL37AP8A6NKH3 93 aa5.49□□□□□ -1.53
PTPRD-209ENST00000477552 SPRR1AP35321 89 aa5.49□□□□□ -1.53
PTPRD-209ENST00000477552 ATP5EP56381 51 aaPredicted RBP5.49□□□□□ -1.53
PTPRD-209ENST00000477552 NREPQ16612 68 aa5.49□□□□□ -1.53
PTPRD-209ENST00000477552 Q6ZRX8 168 aa5.49□□□□□ -1.53
PTPRD-209ENST00000477552 RETNQ9HD89 108 aa5.49□□□□□ -1.53
PTPRD-209ENST00000477552 IGLV1-50A0A075B6I6 118 aa5.48□□□□□ -1.53
PTPRD-209ENST00000477552 C7orf33Q8WU49 177 aa5.48□□□□□ -1.53
PTPRD-209ENST00000477552 CUBNO60494 3623 aa5.48□□□□□ -1.53
PTPRD-209ENST00000477552 A0A087WVE0 104 aa5.47□□□□□ -1.53
PTPRD-209ENST00000477552 LINC00588Q9Y4M8 146 aa5.47□□□□□ -1.53
PTPRD-209ENST00000477552 KLKP1Q107X0 134 aa5.46□□□□□ -1.54
PTPRD-209ENST00000477552 FAM19A1Q7Z5A9 133 aa5.46□□□□□ -1.54
PTPRD-209ENST00000477552 MRPL55Q7Z7F7 128 aaKnown RBP5.46□□□□□ -1.54
PTPRD-209ENST00000477552 BPY2O14599 106 aa5.45□□□□□ -1.54
PTPRD-209ENST00000477552 CNBPP62633 177 aaKnown RBP5.45□□□□□ -1.54
PTPRD-209ENST00000477552 F8WEM9 126 aa5.44□□□□□ -1.54
PTPRD-209ENST00000477552 KRTAP4-16G5E9R7 235 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-209ENST00000477552 J3QL48 77 aa5.44□□□□□ -1.54
PTPRD-209ENST00000477552 LINC00474Q9P2X8 69 aa5.44□□□□□ -1.54
PTPRD-209ENST00000477552 MAST4O15021 2626 aa5.43□□□□□ -1.54
PTPRD-209ENST00000477552 Q8N377 158 aa5.43□□□□□ -1.54
PTPRD-209ENST00000477552 F8P00451 2351 aa5.43□□□□□ -1.54
PTPRD-209ENST00000477552 C16orf90A8MZG2 172 aa5.42□□□□□ -1.54
PTPRD-209ENST00000477552 H0Y9J4 135 aa5.42□□□□□ -1.54
PTPRD-209ENST00000477552 SERTAD4-AS1Q5TG53 156 aa5.42□□□□□ -1.54
PTPRD-209ENST00000477552 REG3GQ6UW15 175 aa5.42□□□□□ -1.54
PTPRD-209ENST00000477552 Q8NBF4 154 aa5.42□□□□□ -1.54
PTPRD-209ENST00000477552 SPRR4Q96PI1 79 aa5.42□□□□□ -1.54
PTPRD-209ENST00000477552 TNP2Q05952 138 aa5.41□□□□□ -1.54
PTPRD-209ENST00000477552 C1orf137Q5JT78 98 aa5.41□□□□□ -1.54
PTPRD-209ENST00000477552 C20orf197Q8N268 126 aa5.41□□□□□ -1.54
PTPRD-209ENST00000477552 DPH3Q96FX2 82 aa5.41□□□□□ -1.54
PTPRD-209ENST00000477552 FAM236DA0A1B0GTK5 79 aa5.4□□□□□ -1.54
PTPRD-209ENST00000477552 PSCAO43653 123 aa5.4□□□□□ -1.54
PTPRD-209ENST00000477552 FAM236CP0DP71 79 aa5.4□□□□□ -1.54
PTPRD-209ENST00000477552 PKD1L1Q8TDX9 2849 aa5.4□□□□□ -1.55
PTPRD-209ENST00000477552 IGLV8-61A0A075B6I0 122 aa5.39□□□□□ -1.55
PTPRD-209ENST00000477552 K7EIL1 84 aa5.39□□□□□ -1.55
PTPRD-209ENST00000477552 UBE2BP63146 152 aa5.39□□□□□ -1.55
PTPRD-209ENST00000477552 SERP1Q9Y6X1 66 aa5.39□□□□□ -1.55
PTPRD-209ENST00000477552 UBE2DNLQ8IWF7 75 aa5.38□□□□□ -1.55
PTPRD-209ENST00000477552 Q9BRP9 147 aa5.38□□□□□ -1.55
PTPRD-209ENST00000477552 STAB1Q9NY15 2570 aa5.38□□□□□ -1.55
PTPRD-209ENST00000477552 BAHCC1Q9P281 2608 aa5.37□□□□□ -1.55
PTPRD-209ENST00000477552 NUPR2A6NF83 97 aa5.37□□□□□ -1.55
PTPRD-209ENST00000477552 M0R2N4 97 aa5.37□□□□□ -1.55
PTPRD-209ENST00000477552 IGKV4-1P06312 121 aa5.37□□□□□ -1.55
PTPRD-209ENST00000477552 DEFB105AQ8NG35 78 aa5.37□□□□□ -1.55
PTPRD-209ENST00000477552 H7BZZ5 65 aa5.36□□□□□ -1.55
PTPRD-209ENST00000477552 FAM19A5Q7Z5A7 132 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-209ENST00000477552 B9D2Q9BPU9 175 aa5.36□□□□□ -1.55
PTPRD-209ENST00000477552 DNAH3Q8TD57 4116 aa5.36□□□□□ -1.55
PTPRD-209ENST00000477552 TENM3Q9P273 2699 aa5.35□□□□□ -1.55
PTPRD-209ENST00000477552 SPRR1BP22528 89 aa5.35□□□□□ -1.55
PTPRD-209ENST00000477552 TMEM254Q8TBM7 123 aa5.35□□□□□ -1.55
PTPRD-209ENST00000477552 A0A1W2PNM2 257 aa5.34□□□□□ -1.55
PTPRD-209ENST00000477552 RPL37AP61513 92 aaKnown RBP5.34□□□□□ -1.55
PTPRD-209ENST00000477552 OCR1Q9BZK8 76 aa5.34□□□□□ -1.55
PTPRD-209ENST00000477552 FLNBO75369 2602 aaKnown RBP5.33□□□□□ -1.56
PTPRD-209ENST00000477552 EPM2AB3EWF7 344 aa5.33□□□□□ -1.56
PTPRD-209ENST00000477552 C5orf47Q569G3 176 aa5.33□□□□□ -1.56
PTPRD-209ENST00000477552 C9orf163Q8N9P6 203 aa5.33□□□□□ -1.56
PTPRD-209ENST00000477552 APLNQ9ULZ1 77 aa5.33□□□□□ -1.56
PTPRD-209ENST00000477552 TRRAPQ9Y4A5 3859 aa5.33□□□□□ -1.56
PTPRD-209ENST00000477552 FAM168BA1KXE4 195 aa5.32□□□□□ -1.56
PTPRD-209ENST00000477552 C3orf84H3BNL1 204 aa5.32□□□□□ -1.56
PTPRD-209ENST00000477552 NDUFB1O75438 58 aa5.32□□□□□ -1.56
PTPRD-209ENST00000477552 NBEAL1Q6ZS30 2694 aa5.31□□□□□ -1.56
PTPRD-209ENST00000477552 FBN1P35555 2871 aaKnown RBP5.31□□□□□ -1.56
PTPRD-209ENST00000477552 SMIM26A0A096LP01 95 aa5.31□□□□□ -1.56
PTPRD-209ENST00000477552 LCE6AA0A183 80 aa5.31□□□□□ -1.56
PTPRD-209ENST00000477552 H3BPC8 53 aa5.31□□□□□ -1.56
PTPRD-209ENST00000477552 CASC10Q5T4H9 136 aa5.31□□□□□ -1.56
PTPRD-209ENST00000477552 SCXQ7RTU7 201 aa5.31□□□□□ -1.56
PTPRD-209ENST00000477552 LINC00476Q8WZB0 136 aa5.31□□□□□ -1.56
PTPRD-209ENST00000477552 A0A096LNI7 61 aa5.3□□□□□ -1.56
PTPRD-209ENST00000477552 A0A0U1RQV1 116 aa5.3□□□□□ -1.56
PTPRD-209ENST00000477552 UBE2AP49459 152 aa5.3□□□□□ -1.56
PTPRD-209ENST00000477552 SMIM29Q86T20 159 aa5.3□□□□□ -1.56
PTPRD-209ENST00000477552 KRTAP7-1Q8IUC3 87 aa5.3□□□□□ -1.56
PTPRD-209ENST00000477552 CYSTM1Q9H1C7 97 aa5.3□□□□□ -1.56
PTPRD-209ENST00000477552 ZNF706Q9Y5V0 76 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-209ENST00000477552 NOTCH1P46531 2555 aa5.29□□□□□ -1.56
PTPRD-209ENST00000477552 NBDYA0A0U1RRE5 68 aa5.29□□□□□ -1.56
PTPRD-209ENST00000477552 HCG22E2RYF7 251 aa5.29□□□□□ -1.56
PTPRD-209ENST00000477552 ST20-AS1Q8NBB2 130 aa5.29□□□□□ -1.56
PTPRD-209ENST00000477552 COL6A5A8TX70 2615 aa5.29□□□□□ -1.56
PTPRD-209ENST00000477552 IGFL1Q6UW32 110 aa5.28□□□□□ -1.56
PTPRD-209ENST00000477552 CMYA5Q8N3K9 4069 aa5.27□□□□□ -1.57
PTPRD-209ENST00000477552 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.27□□□□□ -1.57
PTPRD-209ENST00000477552 IGKV2-24A0A0C4DH68 120 aa5.27□□□□□ -1.57
PTPRD-209ENST00000477552 MP68P56378 58 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms