RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 LOC105371267A0A1B0GV96 52 aa7.4□□□□□ -1.22
APTX-220ENST00000476858 FAM19A1Q7Z5A9 133 aa7.4□□□□□ -1.22
APTX-220ENST00000476858 S100A2P29034 98 aa7.39□□□□□ -1.23
APTX-220ENST00000476858 RPL28P46779 137 aaKnown RBP7.39□□□□□ -1.23
APTX-220ENST00000476858 UBE2AP49459 152 aa7.39□□□□□ -1.23
APTX-220ENST00000476858 C20orf202A1L168 122 aa7.38□□□□□ -1.23
APTX-220ENST00000476858 LINC00587B1AMM8 73 aa7.38□□□□□ -1.23
APTX-220ENST00000476858 KRTAP4-16G5E9R7 235 aaPredicted RBP7.38□□□□□ -1.23
APTX-220ENST00000476858 LINC00308Q8TCZ7 52 aa7.38□□□□□ -1.23
APTX-220ENST00000476858 SPRR1AP35321 89 aa7.36□□□□□ -1.23
APTX-220ENST00000476858 KRTAP13-2Q52LG2 175 aa7.36□□□□□ -1.23
APTX-220ENST00000476858 KCNQ1DNQ9H478 68 aa7.36□□□□□ -1.23
APTX-220ENST00000476858 PRYO14603 147 aa7.35□□□□□ -1.23
APTX-220ENST00000476858 TIMM17BO60830 172 aa7.35□□□□□ -1.23
APTX-220ENST00000476858 DDTP30046 118 aa7.35□□□□□ -1.23
APTX-220ENST00000476858 IGLV6-57P01721 117 aa7.34□□□□□ -1.23
APTX-220ENST00000476858 HIGD2AQ9BW72 106 aa7.34□□□□□ -1.23
APTX-220ENST00000476858 SPANXB1Q9NS25 103 aaPredicted RBP7.34□□□□□ -1.23
APTX-220ENST00000476858 TRBV10-2A0A0K0K1G8 114 aa7.33□□□□□ -1.24
APTX-220ENST00000476858 ERC2-IT1O76042 136 aa7.33□□□□□ -1.24
APTX-220ENST00000476858 NDUFC2O95298 119 aa7.33□□□□□ -1.24
APTX-220ENST00000476858 SMCR5Q8TEV8 140 aa7.33□□□□□ -1.24
APTX-220ENST00000476858 MIEN1Q9BRT3 115 aa7.33□□□□□ -1.24
APTX-220ENST00000476858 B5MCH6 92 aa7.32□□□□□ -1.24
APTX-220ENST00000476858 LINC00337Q8N6G1 96 aa7.32□□□□□ -1.24
APTX-220ENST00000476858 SCGB1D1O95968 90 aa7.31□□□□□ -1.24
APTX-220ENST00000476858 SCGB1D4Q6XE38 83 aa7.31□□□□□ -1.24
APTX-220ENST00000476858 Q9BRP9 147 aa7.31□□□□□ -1.24
APTX-220ENST00000476858 SPANXDQ9BXN6 97 aa7.31□□□□□ -1.24
APTX-220ENST00000476858 SPANXCQ9NY87 97 aa7.31□□□□□ -1.24
APTX-220ENST00000476858 C3orf22Q8N5N4 141 aa7.3□□□□□ -1.24
APTX-220ENST00000476858 ETDCA0A1B0GVM5 59 aa7.29□□□□□ -1.24
APTX-220ENST00000476858 S100A7L2Q5SY68 101 aa7.29□□□□□ -1.24
APTX-220ENST00000476858 MUSTN1Q8IVN3 82 aa7.29□□□□□ -1.24
APTX-220ENST00000476858 SPRR4Q96PI1 79 aa7.29□□□□□ -1.24
APTX-220ENST00000476858 TRAV23DV6A0A075B6W5 121 aa7.28□□□□□ -1.24
APTX-220ENST00000476858 AKR1D1P51857 326 aa7.28□□□□□ -1.24
APTX-220ENST00000476858 PPDPFQ9H3Y8 114 aa7.28□□□□□ -1.24
APTX-220ENST00000476858 CRYGAP11844 174 aa7.27□□□□□ -1.25
APTX-220ENST00000476858 KRTAP19-4Q3LI73 84 aa7.27□□□□□ -1.25
APTX-220ENST00000476858 LCE5AQ5TCM9 118 aa7.27□□□□□ -1.25
APTX-220ENST00000476858 OR13C6PQ8NH95 151 aa7.27□□□□□ -1.25
APTX-220ENST00000476858 ZNF73O43830 326 aaPredicted RBP7.26□□□□□ -1.25
APTX-220ENST00000476858 TSPAN13O95857 204 aa7.26□□□□□ -1.25
APTX-220ENST00000476858 Q6ZRX8 168 aa7.26□□□□□ -1.25
APTX-220ENST00000476858 TYMSOSQ8TAI1 123 aa7.26□□□□□ -1.25
APTX-220ENST00000476858 LRP2P98164 4655 aa7.26□□□□□ -1.25
APTX-220ENST00000476858 RPL13AP40429 203 aaKnown RBP7.25□□□□□ -1.25
APTX-220ENST00000476858 ST20-AS1Q8NBB2 130 aa7.25□□□□□ -1.25
APTX-220ENST00000476858 LPAP08519 4548 aa7.25□□□□□ -1.25
APTX-220ENST00000476858 FAM229BQ4G0N7 80 aa7.24□□□□□ -1.25
APTX-220ENST00000476858 HSBP1L1C9JCN9 74 aa7.23□□□□□ -1.25
APTX-220ENST00000476858 SMIM6P0DI80 62 aa7.23□□□□□ -1.25
APTX-220ENST00000476858 JOSD1Q15040 202 aaPredicted RBP7.23□□□□□ -1.25
APTX-220ENST00000476858 C14orf144Q96I85 54 aa7.23□□□□□ -1.25
APTX-220ENST00000476858 PAM16Q9Y3D7 125 aa7.23□□□□□ -1.25
APTX-220ENST00000476858 IFITM1P13164 125 aa7.22□□□□□ -1.25
APTX-220ENST00000476858 GAGE2AQ6NT46 116 aa7.22□□□□□ -1.25
APTX-220ENST00000476858 UBR4Q5T4S7 5183 aa7.21□□□□□ -1.26
APTX-220ENST00000476858 COX8AP10176 69 aa7.21□□□□□ -1.26
APTX-220ENST00000476858 C6orf99Q4VX62 202 aa7.21□□□□□ -1.26
APTX-220ENST00000476858 LINC00518Q8N0U6 118 aa7.21□□□□□ -1.26
APTX-220ENST00000476858 SPATA45Q537H7 98 aa7.2□□□□□ -1.26
APTX-220ENST00000476858 LINC00483Q53H64 154 aa7.2□□□□□ -1.26
APTX-220ENST00000476858 PYY3Q5JQD4 70 aa7.2□□□□□ -1.26
APTX-220ENST00000476858 A4D1N5 150 aa7.19□□□□□ -1.26
APTX-220ENST00000476858 A6NDN8 102 aa7.19□□□□□ -1.26
APTX-220ENST00000476858 S100A12P80511 92 aa7.19□□□□□ -1.26
APTX-220ENST00000476858 C2orf91Q6ZV80 131 aa7.19□□□□□ -1.26
APTX-220ENST00000476858 Q6ZVH6 145 aa7.19□□□□□ -1.26
APTX-220ENST00000476858 C12orf57Q99622 126 aa7.19□□□□□ -1.26
APTX-220ENST00000476858 ELOF1P60002 83 aaKnown RBP7.18□□□□□ -1.26
APTX-220ENST00000476858 LINC00304Q8N9R0 145 aa7.18□□□□□ -1.26
APTX-220ENST00000476858 RETNLBQ9BQ08 111 aa7.18□□□□□ -1.26
APTX-220ENST00000476858 COX7BP24311 80 aa7.17□□□□□ -1.26
APTX-220ENST00000476858 SMIM11BQ8TCY0 68 aa7.17□□□□□ -1.26
APTX-220ENST00000476858 VAMP8Q9BV40 100 aa7.17□□□□□ -1.26
APTX-220ENST00000476858 ZNF706Q9Y5V0 76 aaPredicted RBP7.17□□□□□ -1.26
APTX-220ENST00000476858 IGLV9-49A0A0B4J1Y8 123 aa7.16□□□□□ -1.26
APTX-220ENST00000476858 DLEU1O43261 78 aa7.16□□□□□ -1.26
APTX-220ENST00000476858 Q8NBF4 154 aa7.16□□□□□ -1.26
APTX-220ENST00000476858 MOBPQ13875 183 aa7.15□□□□□ -1.26
APTX-220ENST00000476858 PRR4Q16378 134 aa7.14□□□□□ -1.27
APTX-220ENST00000476858 HIST1H4GQ99525 98 aa7.14□□□□□ -1.27
APTX-220ENST00000476858 KRTAP9-3Q9BYQ3 159 aa7.14□□□□□ -1.27
APTX-220ENST00000476858 COPS9Q8WXC6 57 aa7.13□□□□□ -1.27
APTX-220ENST00000476858 TRAV13-2A0A0B4J235 113 aa7.12□□□□□ -1.27
APTX-220ENST00000476858 LINC01547P58512 204 aaPredicted RBP7.12□□□□□ -1.27
APTX-220ENST00000476858 SLC25A34Q6PIV7 304 aa7.12□□□□□ -1.27
APTX-220ENST00000476858 HINT1P49773 126 aaPredicted RBP7.11□□□□□ -1.27
APTX-220ENST00000476858 DEFB105AQ8NG35 78 aa7.11□□□□□ -1.27
APTX-220ENST00000476858 DHRS4-AS1Q9P1J3 65 aa7.11□□□□□ -1.27
APTX-220ENST00000476858 HIGD1BQ9P298 99 aa7.11□□□□□ -1.27
APTX-220ENST00000476858 TRBV7-6A0A0J9YX20 115 aa7.1□□□□□ -1.27
APTX-220ENST00000476858 CFC1BP0CG36 223 aa7.1□□□□□ -1.27
APTX-220ENST00000476858 CFC1P0CG37 223 aa7.1□□□□□ -1.27
APTX-220ENST00000476858 SPRR1BP22528 89 aa7.1□□□□□ -1.27
APTX-220ENST00000476858 A0A0G2JQZ4 141 aa7.09□□□□□ -1.27
APTX-220ENST00000476858 A0A1B0GWB2 263 aa7.09□□□□□ -1.27
APTX-220ENST00000476858 SMIM29Q86T20 159 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms