RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 COPS9Q8WXC6 57 aa6.02□□□□□ -1.45
CCM2-208ENST00000476594 ZNF815PA8K554 130 aa6.01□□□□□ -1.45
CCM2-208ENST00000476594 TIMM17BO60830 172 aa6.01□□□□□ -1.45
CCM2-208ENST00000476594 TSPAN13O95857 204 aa6.01□□□□□ -1.45
CCM2-208ENST00000476594 SPRR4Q96PI1 79 aa6.01□□□□□ -1.45
CCM2-208ENST00000476594 ANAPC11Q9NYG5 84 aa6.01□□□□□ -1.45
CCM2-208ENST00000476594 TRAV23DV6A0A075B6W5 121 aa6□□□□□ -1.45
CCM2-208ENST00000476594 C3orf79P0CE67 100 aa6□□□□□ -1.45
CCM2-208ENST00000476594 S100A1P23297 94 aa6□□□□□ -1.45
CCM2-208ENST00000476594 SPAG11AQ6PDA7 123 aa6□□□□□ -1.45
CCM2-208ENST00000476594 SPANXCQ9NY87 97 aa6□□□□□ -1.45
CCM2-208ENST00000476594 NPC2P61916 151 aa5.99□□□□□ -1.45
CCM2-208ENST00000476594 KRTAP13-2Q52LG2 175 aa5.99□□□□□ -1.45
CCM2-208ENST00000476594 SCGB1D4Q6XE38 83 aa5.99□□□□□ -1.45
CCM2-208ENST00000476594 SMCR5Q8TEV8 140 aa5.99□□□□□ -1.45
CCM2-208ENST00000476594 B5MCH6 92 aa5.98□□□□□ -1.45
CCM2-208ENST00000476594 KRTAP4-16G5E9R7 235 aaPredicted RBP5.98□□□□□ -1.45
CCM2-208ENST00000476594 IGLV6-57P01721 117 aa5.98□□□□□ -1.45
CCM2-208ENST00000476594 Q6ZRX8 168 aa5.98□□□□□ -1.45
CCM2-208ENST00000476594 LINC00518Q8N0U6 118 aa5.98□□□□□ -1.45
CCM2-208ENST00000476594 RNF213Q63HN8 5207 aa5.97□□□□□ -1.45
CCM2-208ENST00000476594 ZNF73O43830 326 aaPredicted RBP5.97□□□□□ -1.45
CCM2-208ENST00000476594 S100A2P29034 98 aa5.97□□□□□ -1.45
CCM2-208ENST00000476594 SNRPEP62304 92 aaKnown RBP5.97□□□□□ -1.45
CCM2-208ENST00000476594 OR13C6PQ8NH95 151 aa5.97□□□□□ -1.45
CCM2-208ENST00000476594 LINC00308Q8TCZ7 52 aa5.97□□□□□ -1.45
CCM2-208ENST00000476594 ADAMTSL4-AS1Q5T5F5 129 aa5.96□□□□□ -1.46
CCM2-208ENST00000476594 Q6ZVH6 145 aa5.96□□□□□ -1.46
CCM2-208ENST00000476594 SPANXDQ9BXN6 97 aa5.96□□□□□ -1.46
CCM2-208ENST00000476594 C5orf52A6NGY3 159 aa5.95□□□□□ -1.46
CCM2-208ENST00000476594 HSBP1L1C9JCN9 74 aa5.95□□□□□ -1.46
CCM2-208ENST00000476594 S100A6P06703 90 aa5.95□□□□□ -1.46
CCM2-208ENST00000476594 GAGE2AQ6NT46 116 aa5.95□□□□□ -1.46
CCM2-208ENST00000476594 SOSTDC1Q6X4U4 206 aa5.95□□□□□ -1.46
CCM2-208ENST00000476594 C3orf22Q8N5N4 141 aa5.95□□□□□ -1.46
CCM2-208ENST00000476594 PPDPFQ9H3Y8 114 aa5.95□□□□□ -1.46
CCM2-208ENST00000476594 IFITM1P13164 125 aa5.94□□□□□ -1.46
CCM2-208ENST00000476594 LINC00483Q53H64 154 aa5.94□□□□□ -1.46
CCM2-208ENST00000476594 SLC25A34Q6PIV7 304 aa5.94□□□□□ -1.46
CCM2-208ENST00000476594 LITAFQ99732 161 aa5.94□□□□□ -1.46
CCM2-208ENST00000476594 DHRS4-AS1Q9P1J3 65 aa5.93□□□□□ -1.46
CCM2-208ENST00000476594 SPINK1P00995 79 aa5.92□□□□□ -1.46
CCM2-208ENST00000476594 SSBP3-AS1Q7Z2R9 100 aa5.92□□□□□ -1.46
CCM2-208ENST00000476594 Q8NBF4 154 aa5.92□□□□□ -1.46
CCM2-208ENST00000476594 Q9BRP9 147 aa5.92□□□□□ -1.46
CCM2-208ENST00000476594 IGLV9-49A0A0B4J1Y8 123 aa5.91□□□□□ -1.46
CCM2-208ENST00000476594 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
CCM2-208ENST00000476594 ATOH7Q8N100 152 aa5.91□□□□□ -1.46
CCM2-208ENST00000476594 TTTY13Q9BZ97 58 aa5.91□□□□□ -1.46
CCM2-208ENST00000476594 EIF4EBP3O60516 100 aaPredicted RBP5.9□□□□□ -1.46
CCM2-208ENST00000476594 MOBPQ13875 183 aa5.9□□□□□ -1.46
CCM2-208ENST00000476594 ANKRD39Q53RE8 183 aa5.9□□□□□ -1.46
CCM2-208ENST00000476594 C9orf153Q5TBE3 101 aa5.9□□□□□ -1.46
CCM2-208ENST00000476594 FP248Q71RG6 208 aaPredicted RBP5.9□□□□□ -1.46
CCM2-208ENST00000476594 HIST3H2BBQ8N257 126 aa5.9□□□□□ -1.46
CCM2-208ENST00000476594 LPAP08519 4548 aa5.89□□□□□ -1.47
CCM2-208ENST00000476594 IGLV7-46A0A075B6I9 117 aa5.89□□□□□ -1.47
CCM2-208ENST00000476594 ERC2-IT1O76042 136 aa5.89□□□□□ -1.47
CCM2-208ENST00000476594 COX7BP24311 80 aa5.89□□□□□ -1.47
CCM2-208ENST00000476594 RPS29P62273 56 aaKnown RBP5.89□□□□□ -1.47
CCM2-208ENST00000476594 TPRXLQ17RH7 258 aa5.89□□□□□ -1.47
CCM2-208ENST00000476594 RETNLBQ9BQ08 111 aa5.89□□□□□ -1.47
CCM2-208ENST00000476594 TRAV13-2A0A0B4J235 113 aa5.88□□□□□ -1.47
CCM2-208ENST00000476594 TRBV7-6A0A0J9YX20 115 aa5.88□□□□□ -1.47
CCM2-208ENST00000476594 A6NDN8 102 aa5.88□□□□□ -1.47
CCM2-208ENST00000476594 ELOF1P60002 83 aaKnown RBP5.88□□□□□ -1.47
CCM2-208ENST00000476594 C6orf99Q4VX62 202 aa5.88□□□□□ -1.47
CCM2-208ENST00000476594 HIST1H2BLQ99880 126 aa5.88□□□□□ -1.47
CCM2-208ENST00000476594 CDIP1Q9H305 208 aa5.88□□□□□ -1.47
CCM2-208ENST00000476594 A0A0U1RQV1 116 aa5.87□□□□□ -1.47
CCM2-208ENST00000476594 A0A1B0GWB2 263 aa5.87□□□□□ -1.47
CCM2-208ENST00000476594 A4D1N5 150 aa5.87□□□□□ -1.47
CCM2-208ENST00000476594 PCP2Q8IVA1 136 aa5.87□□□□□ -1.47
CCM2-208ENST00000476594 KRTAP4-12Q9BQ66 201 aa5.87□□□□□ -1.47
CCM2-208ENST00000476594 NHP2Q9NX24 153 aaKnown RBP5.87□□□□□ -1.47
CCM2-208ENST00000476594 LAMTOR3Q9UHA4 124 aa5.87□□□□□ -1.47
CCM2-208ENST00000476594 MUSTN1Q8IVN3 82 aa5.86□□□□□ -1.47
CCM2-208ENST00000476594 TAL2Q16559 108 aa5.85□□□□□ -1.47
CCM2-208ENST00000476594 SLC25A20O43772 301 aa5.84□□□□□ -1.47
CCM2-208ENST00000476594 SCGB1D1O95968 90 aa5.84□□□□□ -1.47
CCM2-208ENST00000476594 SPRR1BP22528 89 aa5.84□□□□□ -1.47
CCM2-208ENST00000476594 VAMP3Q15836 100 aa5.84□□□□□ -1.47
CCM2-208ENST00000476594 ST20-AS1Q8NBB2 130 aa5.84□□□□□ -1.47
CCM2-208ENST00000476594 LIMD2Q9BT23 127 aa5.84□□□□□ -1.47
CCM2-208ENST00000476594 TEX49A0A1B0GTD5 131 aa5.83□□□□□ -1.48
CCM2-208ENST00000476594 DEFB105AQ8NG35 78 aa5.8□□□□□ -1.48
CCM2-208ENST00000476594 PRO1933Q9H354 126 aa5.8□□□□□ -1.48
CCM2-208ENST00000476594 Q8N377 158 aa5.79□□□□□ -1.48
CCM2-208ENST00000476594 HIST1H4GQ99525 98 aa5.79□□□□□ -1.48
CCM2-208ENST00000476594 F8WEM9 126 aa5.78□□□□□ -1.48
CCM2-208ENST00000476594 CD164Q04900 197 aa5.78□□□□□ -1.48
CCM2-208ENST00000476594 Q1RN00 199 aa5.78□□□□□ -1.48
CCM2-208ENST00000476594 SMIM11BQ8TCY0 68 aa5.78□□□□□ -1.48
CCM2-208ENST00000476594 MUC2Q02817 5179 aa5.77□□□□□ -1.49
CCM2-208ENST00000476594 SNCGO76070 127 aa5.77□□□□□ -1.49
CCM2-208ENST00000476594 COX8AP10176 69 aa5.77□□□□□ -1.49
CCM2-208ENST00000476594 IGLV5-48A0A075B6I7 105 aa5.76□□□□□ -1.49
CCM2-208ENST00000476594 H7C2G1 150 aa5.76□□□□□ -1.49
CCM2-208ENST00000476594 DLEU1O43261 78 aa5.76□□□□□ -1.49
CCM2-208ENST00000476594 BVES-AS1Q5T3Y7 98 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms