RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 OR13C6PQ8NH95 151 aa17.89■□□□□ 0.45
HOXB3-208ENST00000476342 DMBT1Q9UGM3 2413 aaPredicted RBP17.86■□□□□ 0.45
HOXB3-208ENST00000476342 TRAV23DV6A0A075B6W5 121 aa17.86■□□□□ 0.45
HOXB3-208ENST00000476342 ETDCA0A1B0GVM5 59 aa17.86■□□□□ 0.45
HOXB3-208ENST00000476342 LINC01600Q96MT4 127 aa17.85■□□□□ 0.45
HOXB3-208ENST00000476342 HIST1H4GQ99525 98 aa17.83■□□□□ 0.45
HOXB3-208ENST00000476342 KRTAP4-16G5E9R7 235 aaPredicted RBP17.82■□□□□ 0.44
HOXB3-208ENST00000476342 HIGD1BQ9P298 99 aa17.81■□□□□ 0.44
HOXB3-208ENST00000476342 ZNF73O43830 326 aaPredicted RBP17.79■□□□□ 0.44
HOXB3-208ENST00000476342 HIGD2AQ9BW72 106 aa17.79■□□□□ 0.44
HOXB3-208ENST00000476342 A6NDN8 102 aa17.76■□□□□ 0.43
HOXB3-208ENST00000476342 KRTAP1-4P0C5Y4 121 aa17.76■□□□□ 0.43
HOXB3-208ENST00000476342 TRAV13-2A0A0B4J235 113 aa17.75■□□□□ 0.43
HOXB3-208ENST00000476342 B5MCH6 92 aa17.75■□□□□ 0.43
HOXB3-208ENST00000476342 HINT1P49773 126 aaPredicted RBP17.75■□□□□ 0.43
HOXB3-208ENST00000476342 A4D1N5 150 aa17.74■□□□□ 0.43
HOXB3-208ENST00000476342 C2orf91Q6ZV80 131 aa17.73■□□□□ 0.43
HOXB3-208ENST00000476342 MT1HL1P0DM35 61 aa17.72■□□□□ 0.43
HOXB3-208ENST00000476342 Q6ZRX8 168 aa17.72■□□□□ 0.43
HOXB3-208ENST00000476342 TAL2Q16559 108 aa17.67■□□□□ 0.42
HOXB3-208ENST00000476342 SMCR5Q8TEV8 140 aa17.67■□□□□ 0.42
HOXB3-208ENST00000476342 TNXBP22105 4242 aa17.66■□□□□ 0.42
HOXB3-208ENST00000476342 KRTAP10-8P60410 259 aa17.66■□□□□ 0.42
HOXB3-208ENST00000476342 PRR26Q8N8Z3 221 aa17.66■□□□□ 0.42
HOXB3-208ENST00000476342 C6orf99Q4VX62 202 aa17.65■□□□□ 0.42
HOXB3-208ENST00000476342 UQCR10Q9UDW1 63 aa17.65■□□□□ 0.42
HOXB3-208ENST00000476342 ZNF706Q9Y5V0 76 aaPredicted RBP17.65■□□□□ 0.42
HOXB3-208ENST00000476342 SMIM6P0DI80 62 aa17.64■□□□□ 0.42
HOXB3-208ENST00000476342 RPL13AP40429 203 aaKnown RBP17.64■□□□□ 0.41
HOXB3-208ENST00000476342 Q9BRP9 147 aa17.64■□□□□ 0.41
HOXB3-208ENST00000476342 C12orf57Q99622 126 aa17.62■□□□□ 0.41
HOXB3-208ENST00000476342 CEND1Q8N111 149 aa17.61■□□□□ 0.41
HOXB3-208ENST00000476342 CRYGAP11844 174 aa17.6■□□□□ 0.41
HOXB3-208ENST00000476342 TRBV7-6A0A0J9YX20 115 aa17.59■□□□□ 0.41
HOXB3-208ENST00000476342 COX7BP24311 80 aa17.59■□□□□ 0.41
HOXB3-208ENST00000476342 ELOF1P60002 83 aaKnown RBP17.59■□□□□ 0.41
HOXB3-208ENST00000476342 FAM229BQ4G0N7 80 aa17.59■□□□□ 0.41
HOXB3-208ENST00000476342 SPRR4Q96PI1 79 aa17.59■□□□□ 0.41
HOXB3-208ENST00000476342 SMIM11BQ8TCY0 68 aa17.58■□□□□ 0.41
HOXB3-208ENST00000476342 ANAPC11Q9NYG5 84 aa17.57■□□□□ 0.4
HOXB3-208ENST00000476342 HERC1Q15751 4861 aa17.57■□□□□ 0.4
HOXB3-208ENST00000476342 TMEM238LA0A1B0GVL6 79 aa17.56■□□□□ 0.4
HOXB3-208ENST00000476342 A6NJY4 79 aa17.56■□□□□ 0.4
HOXB3-208ENST00000476342 A0A087X002 238 aa17.55■□□□□ 0.4
HOXB3-208ENST00000476342 LOC105371267A0A1B0GV96 52 aa17.55■□□□□ 0.4
HOXB3-208ENST00000476342 A0A1B0GWB2 263 aa17.55■□□□□ 0.4
HOXB3-208ENST00000476342 ERC2-IT1O76042 136 aa17.55■□□□□ 0.4
HOXB3-208ENST00000476342 DHRS4-AS1Q9P1J3 65 aa17.55■□□□□ 0.4
HOXB3-208ENST00000476342 HSD52Q0P140 79 aa17.55■□□□□ 0.4
HOXB3-208ENST00000476342 RAB37Q96AX2 223 aa17.55■□□□□ 0.4
HOXB3-208ENST00000476342 CFC1BP0CG36 223 aa17.53■□□□□ 0.4
HOXB3-208ENST00000476342 CFC1P0CG37 223 aa17.53■□□□□ 0.4
HOXB3-208ENST00000476342 A0A0B4J2C4 111 aa17.52■□□□□ 0.4
HOXB3-208ENST00000476342 FXYD2P54710 66 aa17.48■□□□□ 0.39
HOXB3-208ENST00000476342 VAMP3Q15836 100 aa17.48■□□□□ 0.39
HOXB3-208ENST00000476342 GAGE2AQ6NT46 116 aa17.47■□□□□ 0.39
HOXB3-208ENST00000476342 TYMSOSQ8TAI1 123 aa17.47■□□□□ 0.39
HOXB3-208ENST00000476342 PRO1933Q9H354 126 aa17.47■□□□□ 0.39
HOXB3-208ENST00000476342 LINC00483Q53H64 154 aa17.46■□□□□ 0.39
HOXB3-208ENST00000476342 KRTAP13-2Q52LG2 175 aa17.45■□□□□ 0.38
HOXB3-208ENST00000476342 H7C2G1 150 aa17.43■□□□□ 0.38
HOXB3-208ENST00000476342 NHP2Q9NX24 153 aaKnown RBP17.43■□□□□ 0.38
HOXB3-208ENST00000476342 ST20-AS1Q8NBB2 130 aa17.41■□□□□ 0.38
HOXB3-208ENST00000476342 BVES-AS1Q5T3Y7 98 aa17.4■□□□□ 0.38
HOXB3-208ENST00000476342 PRO1854Q9UHT4 67 aa17.4■□□□□ 0.38
HOXB3-208ENST00000476342 SLC25A20O43772 301 aa17.38■□□□□ 0.37
HOXB3-208ENST00000476342 Q1RN00 199 aa17.38■□□□□ 0.37
HOXB3-208ENST00000476342 C3orf22Q8N5N4 141 aa17.37■□□□□ 0.37
HOXB3-208ENST00000476342 TSTD3H0UI37 97 aa17.34■□□□□ 0.37
HOXB3-208ENST00000476342 LINC00575Q6W349 94 aa17.32■□□□□ 0.36
HOXB3-208ENST00000476342 SPRR1BP22528 89 aa17.3■□□□□ 0.36
HOXB3-208ENST00000476342 IGLV9-49A0A0B4J1Y8 123 aa17.29■□□□□ 0.36
HOXB3-208ENST00000476342 hADV29S1A0JD25 119 aa17.29■□□□□ 0.36
HOXB3-208ENST00000476342 LINC00304Q8N9R0 145 aa17.28■□□□□ 0.36
HOXB3-208ENST00000476342 DEFB105AQ8NG35 78 aa17.28■□□□□ 0.36
HOXB3-208ENST00000476342 TEX49A0A1B0GTD5 131 aa17.27■□□□□ 0.35
HOXB3-208ENST00000476342 K7ERJ3 54 aa17.27■□□□□ 0.35
HOXB3-208ENST00000476342 CTAG1AP78358 180 aa17.27■□□□□ 0.35
HOXB3-208ENST00000476342 H0YGX0 51 aa17.25■□□□□ 0.35
HOXB3-208ENST00000476342 M0R143 59 aa17.25■□□□□ 0.35
HOXB3-208ENST00000476342 MOBPQ13875 183 aa17.24■□□□□ 0.35
HOXB3-208ENST00000476342 IGLV5-48A0A075B6I7 105 aa17.23■□□□□ 0.35
HOXB3-208ENST00000476342 LAMTOR3Q9UHA4 124 aa17.23■□□□□ 0.35
HOXB3-208ENST00000476342 SNCGO76070 127 aa17.21■□□□□ 0.35
HOXB3-208ENST00000476342 C9orf153Q5TBE3 101 aa17.21■□□□□ 0.35
HOXB3-208ENST00000476342 SSBP3-AS1Q7Z2R9 100 aa17.21■□□□□ 0.35
HOXB3-208ENST00000476342 Q8NBF4 154 aa17.21■□□□□ 0.34
HOXB3-208ENST00000476342 LINC01547P58512 204 aaPredicted RBP17.2■□□□□ 0.34
HOXB3-208ENST00000476342 Q6ZQY7 126 aa17.2■□□□□ 0.34
HOXB3-208ENST00000476342 TRIAP1O43715 76 aa17.18■□□□□ 0.34
HOXB3-208ENST00000476342 TSPAN13O95857 204 aa17.18■□□□□ 0.34
HOXB3-208ENST00000476342 SPAG11AQ6PDA7 123 aa17.18■□□□□ 0.34
HOXB3-208ENST00000476342 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP17.17■□□□□ 0.34
HOXB3-208ENST00000476342 PSMB2P49721 201 aa17.16■□□□□ 0.34
HOXB3-208ENST00000476342 C4orf48Q5BLP8 95 aa17.16■□□□□ 0.34
HOXB3-208ENST00000476342 Q8N377 158 aa17.14■□□□□ 0.33
HOXB3-208ENST00000476342 COX6CP09669 75 aa17.13■□□□□ 0.33
HOXB3-208ENST00000476342 A0A1B0GX51 115 aa17.12■□□□□ 0.33
HOXB3-208ENST00000476342 FAM218AQ96MZ4 157 aa17.12■□□□□ 0.33
HOXB3-208ENST00000476342 SMIM29Q86T20 159 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms