RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	SMG1	Q96Q15	3661 aa	Known RBP	4.28	□□□□□ -1.72
HNRNPU-208	ENST00000475997	IGKV2D-30	A0A075B6S6	120 aa		4.28	□□□□□ -1.72
HNRNPU-208	ENST00000475997	IGKV2-30	P06310	120 aa		4.28	□□□□□ -1.72
HNRNPU-208	ENST00000475997	CFAP46	Q8IYW2	2715 aa		4.28	□□□□□ -1.72
HNRNPU-208	ENST00000475997	CHD6	Q8TD26	2715 aa		4.28	□□□□□ -1.72
HNRNPU-208	ENST00000475997	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.28	□□□□□ -1.72
HNRNPU-208	ENST00000475997	IGLV4-60	A0A075B6I1	120 aa		4.28	□□□□□ -1.72
HNRNPU-208	ENST00000475997	ITPR3	Q14573	2671 aa		4.27	□□□□□ -1.73
HNRNPU-208	ENST00000475997	FHL2	Q14192	279 aa		4.27	□□□□□ -1.73
HNRNPU-208	ENST00000475997	LINC00336	Q6ZUF6	198 aa		4.27	□□□□□ -1.73
HNRNPU-208	ENST00000475997	DEFB116	Q30KQ4	102 aa		4.27	□□□□□ -1.73
HNRNPU-208	ENST00000475997	SSBP3-AS1	Q7Z2R9	100 aa		4.27	□□□□□ -1.73
HNRNPU-208	ENST00000475997	LINC01006	Q8NI28	216 aa		4.27	□□□□□ -1.73
HNRNPU-208	ENST00000475997	TEX15	Q9BXT5	2789 aa		4.27	□□□□□ -1.73
HNRNPU-208	ENST00000475997	KLKP1	Q107X0	134 aa		4.27	□□□□□ -1.73
HNRNPU-208	ENST00000475997		Q6ZQT0	140 aa		4.27	□□□□□ -1.73
HNRNPU-208	ENST00000475997		Q8NBF4	154 aa		4.27	□□□□□ -1.73
HNRNPU-208	ENST00000475997	TM2D3	Q9BRN9	247 aa		4.27	□□□□□ -1.73
HNRNPU-208	ENST00000475997	WIPF1	O43516	503 aa		4.26	□□□□□ -1.73
HNRNPU-208	ENST00000475997	LINC01600	Q96MT4	127 aa		4.26	□□□□□ -1.73
HNRNPU-208	ENST00000475997	IGSF10	Q6WRI0	2623 aa		4.26	□□□□□ -1.73
HNRNPU-208	ENST00000475997	DCHS2	Q6V1P9	2916 aa		4.26	□□□□□ -1.73
HNRNPU-208	ENST00000475997	CRIPT	Q9P021	101 aa		4.26	□□□□□ -1.73
HNRNPU-208	ENST00000475997	ZAN	Q9Y493	2812 aa		4.26	□□□□□ -1.73
HNRNPU-208	ENST00000475997	KIAA0087	Q14695	138 aa		4.25	□□□□□ -1.73
HNRNPU-208	ENST00000475997	HECTD1	Q9ULT8	2610 aa		4.24	□□□□□ -1.73
HNRNPU-208	ENST00000475997	PLA2G1B	P04054	148 aa	Known RBP	4.24	□□□□□ -1.73
HNRNPU-208	ENST00000475997	FSHB	P01225	129 aa		4.24	□□□□□ -1.73
HNRNPU-208	ENST00000475997	MOBP	Q13875	183 aa		4.24	□□□□□ -1.73
HNRNPU-208	ENST00000475997	COA5	Q86WW8	74 aa		4.24	□□□□□ -1.73
HNRNPU-208	ENST00000475997	SMCR5	Q8TEV8	140 aa		4.24	□□□□□ -1.73
HNRNPU-208	ENST00000475997	IGLV5-45	A0A087WSX0	123 aa		4.23	□□□□□ -1.73
HNRNPU-208	ENST00000475997		A8MTW9	85 aa		4.23	□□□□□ -1.73
HNRNPU-208	ENST00000475997	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.23	□□□□□ -1.73
HNRNPU-208	ENST00000475997	MIR22HG	Q0VDD5	57 aa		4.22	□□□□□ -1.73
HNRNPU-208	ENST00000475997	EIF4EBP3	O60516	100 aa	Predicted RBP	4.22	□□□□□ -1.73
HNRNPU-208	ENST00000475997	LINC01556	Q5JQF7	62 aa		4.22	□□□□□ -1.73
HNRNPU-208	ENST00000475997	CSMD1	Q96PZ7	3565 aa		4.22	□□□□□ -1.73
HNRNPU-208	ENST00000475997	FHL3	Q13643	280 aa		4.22	□□□□□ -1.73
HNRNPU-208	ENST00000475997	LITAF	Q99732	161 aa		4.22	□□□□□ -1.73
HNRNPU-208	ENST00000475997	CRYBG3	Q68DQ2	2970 aa		4.22	□□□□□ -1.73
HNRNPU-208	ENST00000475997	FAM218A	Q96MZ4	157 aa		4.22	□□□□□ -1.73
HNRNPU-208	ENST00000475997	FAM229A	H3BQW9	127 aa		4.21	□□□□□ -1.74
HNRNPU-208	ENST00000475997	GCN1	Q92616	2671 aa	Known RBP	4.21	□□□□□ -1.74
HNRNPU-208	ENST00000475997		Q6ZRU5	148 aa		4.21	□□□□□ -1.74
HNRNPU-208	ENST00000475997	PRR15	Q8IV56	129 aa		4.21	□□□□□ -1.74
HNRNPU-208	ENST00000475997	C22orf24	Q9Y442	160 aa		4.21	□□□□□ -1.74
HNRNPU-208	ENST00000475997	NBEAL2	Q6ZNJ1	2754 aa		4.21	□□□□□ -1.74
HNRNPU-208	ENST00000475997	TRBV7-4	A0A0J9YYF1	115 aa		4.2	□□□□□ -1.74
HNRNPU-208	ENST00000475997	FLNB	O75369	2602 aa	Known RBP	4.2	□□□□□ -1.74
HNRNPU-208	ENST00000475997	ATR	Q13535	2644 aa		4.2	□□□□□ -1.74
HNRNPU-208	ENST00000475997	IGLV8-61	A0A075B6I0	122 aa		4.2	□□□□□ -1.74
HNRNPU-208	ENST00000475997	IGLV1-51	P01701	117 aa		4.2	□□□□□ -1.74
HNRNPU-208	ENST00000475997	USP24	Q9UPU5	2620 aa		4.2	□□□□□ -1.74
HNRNPU-208	ENST00000475997	UTP20	O75691	2785 aa	Known RBP	4.19	□□□□□ -1.74
HNRNPU-208	ENST00000475997		H7BZZ5	65 aa		4.19	□□□□□ -1.74
HNRNPU-208	ENST00000475997	NUPR2	A6NF83	97 aa		4.19	□□□□□ -1.74
HNRNPU-208	ENST00000475997		A8MWP4	228 aa		4.19	□□□□□ -1.74
HNRNPU-208	ENST00000475997	LUZP6	Q538Z0	58 aa		4.19	□□□□□ -1.74
HNRNPU-208	ENST00000475997	LINC00476	Q8WZB0	136 aa		4.18	□□□□□ -1.74
HNRNPU-208	ENST00000475997	CDC42SE1	Q9NRR8	79 aa		4.18	□□□□□ -1.74
HNRNPU-208	ENST00000475997	NF1	P21359	2839 aa		4.18	□□□□□ -1.74
HNRNPU-208	ENST00000475997		A0A096LNT2	108 aa		4.18	□□□□□ -1.74
HNRNPU-208	ENST00000475997		M0R2N4	97 aa		4.18	□□□□□ -1.74
HNRNPU-208	ENST00000475997	HELZ2	Q9BYK8	2649 aa	Known RBP	4.18	□□□□□ -1.74
HNRNPU-208	ENST00000475997	SMR3A	Q99954	134 aa		4.18	□□□□□ -1.74
HNRNPU-208	ENST00000475997	IGLV5-52	A0A0A0MRZ9	124 aa		4.17	□□□□□ -1.74
HNRNPU-208	ENST00000475997		Q6ZRX8	168 aa		4.17	□□□□□ -1.74
HNRNPU-208	ENST00000475997	LINC00313	P59037	77 aa		4.17	□□□□□ -1.74
HNRNPU-208	ENST00000475997	LYPD5	Q6UWN5	251 aa		4.17	□□□□□ -1.74
HNRNPU-208	ENST00000475997	CELSR1	Q9NYQ6	3014 aa		4.17	□□□□□ -1.74
HNRNPU-208	ENST00000475997	LINC01554	Q52M75	96 aa		4.17	□□□□□ -1.74
HNRNPU-208	ENST00000475997	LINC00167	Q96N53	147 aa		4.17	□□□□□ -1.74
HNRNPU-208	ENST00000475997	SVEP1	Q4LDE5	3571 aa		4.16	□□□□□ -1.74
HNRNPU-208	ENST00000475997	FBN2	P35556	2912 aa		4.16	□□□□□ -1.74
HNRNPU-208	ENST00000475997	MRPL34	Q9BQ48	92 aa	Known RBP	4.16	□□□□□ -1.74
HNRNPU-208	ENST00000475997	SPANXA2-OT1	Q8N9U9	137 aa		4.15	□□□□□ -1.74
HNRNPU-208	ENST00000475997	FAM104A	Q969W3	186 aa		4.15	□□□□□ -1.74
HNRNPU-208	ENST00000475997	EPM2A	B3EWF7	344 aa		4.15	□□□□□ -1.75
HNRNPU-208	ENST00000475997	SETX	Q7Z333	2677 aa	Known RBP	4.14	□□□□□ -1.75
HNRNPU-208	ENST00000475997	INAFM1	C9JVW0	142 aa		4.14	□□□□□ -1.75
HNRNPU-208	ENST00000475997	LY6G6C	O95867	125 aa		4.14	□□□□□ -1.75
HNRNPU-208	ENST00000475997	MXRA5	Q9NR99	2828 aa		4.14	□□□□□ -1.75
HNRNPU-208	ENST00000475997		H3BS24	57 aa		4.14	□□□□□ -1.75
HNRNPU-208	ENST00000475997	SPACA4	Q8TDM5	124 aa		4.13	□□□□□ -1.75
HNRNPU-208	ENST00000475997		K7EQZ3	153 aa		4.13	□□□□□ -1.75
HNRNPU-208	ENST00000475997	LY6G6D	O95868	133 aa		4.13	□□□□□ -1.75
HNRNPU-208	ENST00000475997	C16orf95	Q9H693	158 aa		4.13	□□□□□ -1.75
HNRNPU-208	ENST00000475997	CELSR2	Q9HCU4	2923 aa		4.12	□□□□□ -1.75
HNRNPU-208	ENST00000475997	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.12	□□□□□ -1.75
HNRNPU-208	ENST00000475997	GIG44	P09565	113 aa	Predicted RBP	4.12	□□□□□ -1.75
HNRNPU-208	ENST00000475997	RBM12B-AS1	Q9P1G2	102 aa		4.12	□□□□□ -1.75
HNRNPU-208	ENST00000475997	UBR5	O95071	2799 aa	Predicted RBP	4.12	□□□□□ -1.75
HNRNPU-208	ENST00000475997		Q1T7F1	81 aa		4.12	□□□□□ -1.75
HNRNPU-208	ENST00000475997	ITPR2	Q14571	2701 aa		4.12	□□□□□ -1.75
HNRNPU-208	ENST00000475997		Q6ZRP5	223 aa		4.11	□□□□□ -1.75
HNRNPU-208	ENST00000475997	SPEN	Q96T58	3664 aa	Known RBP	4.11	□□□□□ -1.75
HNRNPU-208	ENST00000475997	IGLV6-57	P01721	117 aa		4.11	□□□□□ -1.75
HNRNPU-208	ENST00000475997	APLN	Q9ULZ1	77 aa		4.11	□□□□□ -1.75
HNRNPU-208	ENST00000475997		A0A0A0MQY5	61 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms