RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 LY6G6DO95868 133 aa8.08□□□□□ -1.12
U2AF1-209ENST00000475639 CELSR1Q9NYQ6 3014 aa8.07□□□□□ -1.12
U2AF1-209ENST00000475639 IGLV5-45A0A087WSX0 123 aa8.07□□□□□ -1.12
U2AF1-209ENST00000475639 A0A1B0GUV1 79 aa8.07□□□□□ -1.12
U2AF1-209ENST00000475639 IGLV5-39A0A0G2JS06 123 aa8.06□□□□□ -1.12
U2AF1-209ENST00000475639 H3BPC8 53 aa8.06□□□□□ -1.12
U2AF1-209ENST00000475639 C16orf95Q9H693 158 aa8.06□□□□□ -1.12
U2AF1-209ENST00000475639 C6orf48Q9UBA6 75 aa8.06□□□□□ -1.12
U2AF1-209ENST00000475639 AVPP01185 164 aa8.05□□□□□ -1.12
U2AF1-209ENST00000475639 SMIM29Q86T20 159 aa8.05□□□□□ -1.12
U2AF1-209ENST00000475639 C1orf134Q5TEV5 83 aa8.05□□□□□ -1.12
U2AF1-209ENST00000475639 A0A1B0GW54 56 aa8.04□□□□□ -1.12
U2AF1-209ENST00000475639 EDN2P20800 178 aa8.04□□□□□ -1.12
U2AF1-209ENST00000475639 H7BZZ5 65 aa8.04□□□□□ -1.12
U2AF1-209ENST00000475639 C18orf65Q6ZTR6 163 aa8.04□□□□□ -1.12
U2AF1-209ENST00000475639 FP248Q71RG6 208 aaPredicted RBP8.03□□□□□ -1.12
U2AF1-209ENST00000475639 SPACA4Q8TDM5 124 aa8.03□□□□□ -1.12
U2AF1-209ENST00000475639 A8MTW9 85 aa8.03□□□□□ -1.12
U2AF1-209ENST00000475639 IGLV1-51P01701 117 aa8.03□□□□□ -1.12
U2AF1-209ENST00000475639 C11orf71Q6IPW1 123 aa8.03□□□□□ -1.12
U2AF1-209ENST00000475639 HRNRQ86YZ3 2850 aaPredicted RBP8.02□□□□□ -1.13
U2AF1-209ENST00000475639 SSBP3-AS1Q7Z2R9 100 aa8.02□□□□□ -1.13
U2AF1-209ENST00000475639 LYPD5Q6UWN5 251 aa8.01□□□□□ -1.13
U2AF1-209ENST00000475639 ATRQ13535 2644 aa8.01□□□□□ -1.13
U2AF1-209ENST00000475639 Q6ZRU5 148 aa8.01□□□□□ -1.13
U2AF1-209ENST00000475639 Q6ZSN1 163 aa8.01□□□□□ -1.13
U2AF1-209ENST00000475639 TRAV22A0A0B4J277 110 aa8□□□□□ -1.13
U2AF1-209ENST00000475639 SPATA3Q8NHX4 192 aa8□□□□□ -1.13
U2AF1-209ENST00000475639 KIAA0087Q14695 138 aa8□□□□□ -1.13
U2AF1-209ENST00000475639 IGLV8-61A0A075B6I0 122 aa8□□□□□ -1.13
U2AF1-209ENST00000475639 CRIPTQ9P021 101 aa7.99□□□□□ -1.13
U2AF1-209ENST00000475639 MAST4O15021 2626 aa7.98□□□□□ -1.13
U2AF1-209ENST00000475639 MGAM2Q2M2H8 2515 aa7.97□□□□□ -1.13
U2AF1-209ENST00000475639 COL12A1Q99715 3063 aa7.97□□□□□ -1.13
U2AF1-209ENST00000475639 MOBPQ13875 183 aa7.96□□□□□ -1.13
U2AF1-209ENST00000475639 ANKRD11Q6UB99 2663 aaPredicted RBP7.96□□□□□ -1.14
U2AF1-209ENST00000475639 UQCR11O14957 56 aa7.95□□□□□ -1.14
U2AF1-209ENST00000475639 KLKP1Q107X0 134 aa7.95□□□□□ -1.14
U2AF1-209ENST00000475639 Q8NBF4 154 aa7.95□□□□□ -1.14
U2AF1-209ENST00000475639 CDSNQ15517 529 aa7.94□□□□□ -1.14
U2AF1-209ENST00000475639 C11orf72Q8NBR9 251 aa7.94□□□□□ -1.14
U2AF1-209ENST00000475639 CEP295Q9C0D2 2601 aa7.94□□□□□ -1.14
U2AF1-209ENST00000475639 VPS13CQ709C8 3753 aa7.93□□□□□ -1.14
U2AF1-209ENST00000475639 CYP4F30PQ9H0H9 118 aa7.93□□□□□ -1.14
U2AF1-209ENST00000475639 LINC00167Q96N53 147 aa7.92□□□□□ -1.14
U2AF1-209ENST00000475639 IGHV3OR16-9A0A0B4J2B5 98 aa7.92□□□□□ -1.14
U2AF1-209ENST00000475639 LOC101927531A0A1B0GV80 90 aa7.92□□□□□ -1.14
U2AF1-209ENST00000475639 LINC00313P59037 77 aa7.92□□□□□ -1.14
U2AF1-209ENST00000475639 CSMD2Q7Z408 3487 aa7.92□□□□□ -1.14
U2AF1-209ENST00000475639 CRYBG3Q68DQ2 2970 aa7.92□□□□□ -1.14
U2AF1-209ENST00000475639 FAM229AH3BQW9 127 aa7.9□□□□□ -1.14
U2AF1-209ENST00000475639 CUBNO60494 3623 aa7.89□□□□□ -1.15
U2AF1-209ENST00000475639 A8MUN3 132 aa7.87□□□□□ -1.15
U2AF1-209ENST00000475639 LINC00476Q8WZB0 136 aa7.87□□□□□ -1.15
U2AF1-209ENST00000475639 FAM229BQ4G0N7 80 aa7.86□□□□□ -1.15
U2AF1-209ENST00000475639 FLNBO75369 2602 aaKnown RBP7.86□□□□□ -1.15
U2AF1-209ENST00000475639 TM2D3Q9BRN9 247 aa7.85□□□□□ -1.15
U2AF1-209ENST00000475639 TYMSOSQ8TAI1 123 aa7.85□□□□□ -1.15
U2AF1-209ENST00000475639 A0A096LNT2 108 aa7.84□□□□□ -1.15
U2AF1-209ENST00000475639 STAB1Q9NY15 2570 aa7.84□□□□□ -1.15
U2AF1-209ENST00000475639 APLNQ9ULZ1 77 aa7.84□□□□□ -1.15
U2AF1-209ENST00000475639 HECTD1Q9ULT8 2610 aa7.84□□□□□ -1.15
U2AF1-209ENST00000475639 LUZP6Q538Z0 58 aa7.83□□□□□ -1.16
U2AF1-209ENST00000475639 Q6ZQT0 140 aa7.83□□□□□ -1.16
U2AF1-209ENST00000475639 TRBV7-4A0A0J9YYF1 115 aa7.83□□□□□ -1.16
U2AF1-209ENST00000475639 LOC110117498A0A087WWA1 95 aa7.82□□□□□ -1.16
U2AF1-209ENST00000475639 ELOF1P60002 83 aaKnown RBP7.82□□□□□ -1.16
U2AF1-209ENST00000475639 Q6ZRX8 168 aa7.82□□□□□ -1.16
U2AF1-209ENST00000475639 CD164Q04900 197 aa7.82□□□□□ -1.16
U2AF1-209ENST00000475639 MDFIQ99750 246 aa7.82□□□□□ -1.16
U2AF1-209ENST00000475639 Q6ZRP5 223 aa7.81□□□□□ -1.16
U2AF1-209ENST00000475639 COA5Q86WW8 74 aa7.81□□□□□ -1.16
U2AF1-209ENST00000475639 Q96NJ1 140 aa7.81□□□□□ -1.16
U2AF1-209ENST00000475639 MIR22HGQ0VDD5 57 aa7.8□□□□□ -1.16
U2AF1-209ENST00000475639 COX6B2Q6YFQ2 88 aa7.8□□□□□ -1.16
U2AF1-209ENST00000475639 SMR3AQ99954 134 aa7.8□□□□□ -1.16
U2AF1-209ENST00000475639 MRPL34Q9BQ48 92 aaKnown RBP7.79□□□□□ -1.16
U2AF1-209ENST00000475639 ERC2-IT1O76042 136 aa7.79□□□□□ -1.16
U2AF1-209ENST00000475639 MAP1AP78559 2803 aaPredicted RBP7.78□□□□□ -1.16
U2AF1-209ENST00000475639 LINC01554Q52M75 96 aa7.78□□□□□ -1.16
U2AF1-209ENST00000475639 A8MWP4 228 aa7.77□□□□□ -1.17
U2AF1-209ENST00000475639 LCA10Q71F78 164 aa7.76□□□□□ -1.17
U2AF1-209ENST00000475639 RPL37AP61513 92 aaKnown RBP7.76□□□□□ -1.17
U2AF1-209ENST00000475639 ST20-AS1Q8NBB2 130 aa7.75□□□□□ -1.17
U2AF1-209ENST00000475639 PHF5AQ7RTV0 110 aaKnown RBP7.75□□□□□ -1.17
U2AF1-209ENST00000475639 A0A1W2PPR1 153 aa7.75□□□□□ -1.17
U2AF1-209ENST00000475639 H3BNG1 76 aa7.74□□□□□ -1.17
U2AF1-209ENST00000475639 KRTAP10-9P60411 292 aa7.73□□□□□ -1.17
U2AF1-209ENST00000475639 DMBT1Q9UGM3 2413 aaPredicted RBP7.73□□□□□ -1.17
U2AF1-209ENST00000475639 NBPF19A0A087WUL8 3843 aa7.73□□□□□ -1.17
U2AF1-209ENST00000475639 C16orf90A8MZG2 172 aa7.72□□□□□ -1.17
U2AF1-209ENST00000475639 IGLV6-57P01721 117 aa7.71□□□□□ -1.18
U2AF1-209ENST00000475639 CDC42SE1Q9NRR8 79 aa7.7□□□□□ -1.18
U2AF1-209ENST00000475639 AKAP9Q99996 3911 aa7.7□□□□□ -1.18
U2AF1-209ENST00000475639 PRR15Q8IV56 129 aa7.7□□□□□ -1.18
U2AF1-209ENST00000475639 K7EQZ3 153 aa7.69□□□□□ -1.18
U2AF1-209ENST00000475639 KTN1-AS1Q86SY8 53 aa7.69□□□□□ -1.18
U2AF1-209ENST00000475639 RTL8CO15255 209 aa7.69□□□□□ -1.18
U2AF1-209ENST00000475639 J3QL48 77 aa7.68□□□□□ -1.18
U2AF1-209ENST00000475639 CELSR2Q9HCU4 2923 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms