RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 IGF2RP11717 2491 aa1.23□□□□□ -2.21
SMC5-203ENST00000475540 KANTRA0A1W2PQU2 76 aa1.23□□□□□ -2.21
SMC5-203ENST00000475540 ACYP1P07311 99 aa1.23□□□□□ -2.21
SMC5-203ENST00000475540 LINC00643Q86TS7 51 aa1.23□□□□□ -2.21
SMC5-203ENST00000475540 PLAC8Q9NZF1 115 aa1.23□□□□□ -2.21
SMC5-203ENST00000475540 SPTBN2O15020 2390 aa1.23□□□□□ -2.21
SMC5-203ENST00000475540 TGP01266 2768 aa1.23□□□□□ -2.21
SMC5-203ENST00000475540 MYO15AQ9UKN7 3530 aa1.23□□□□□ -2.21
SMC5-203ENST00000475540 ITSN2Q9NZM3 1697 aa1.23□□□□□ -2.21
SMC5-203ENST00000475540 PAPPA2Q9BXP8 1791 aa1.22□□□□□ -2.21
SMC5-203ENST00000475540 NEXMIFQ5QGS0 1516 aa1.22□□□□□ -2.21
SMC5-203ENST00000475540 TENM3Q9P273 2699 aa1.22□□□□□ -2.21
SMC5-203ENST00000475540 NMSQ5H8A3 153 aa1.22□□□□□ -2.21
SMC5-203ENST00000475540 C6orf201Q7Z4U5 140 aa1.22□□□□□ -2.21
SMC5-203ENST00000475540 CRYBG1Q9Y4K1 1723 aa1.22□□□□□ -2.21
SMC5-203ENST00000475540 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
SMC5-203ENST00000475540 RYR2Q92736 4967 aa1.21□□□□□ -2.22
SMC5-203ENST00000475540 DSPP15924 2871 aaKnown RBP1.21□□□□□ -2.22
SMC5-203ENST00000475540 ERVK-7P63135 1459 aa1.21□□□□□ -2.22
SMC5-203ENST00000475540 TRBV7-4A0A0J9YYF1 115 aa1.21□□□□□ -2.22
SMC5-203ENST00000475540 ADIRFQ15847 76 aa1.21□□□□□ -2.22
SMC5-203ENST00000475540 ST20Q9HBF5 79 aa1.21□□□□□ -2.22
SMC5-203ENST00000475540 TP53AIP1Q9HCN2 124 aa1.21□□□□□ -2.22
SMC5-203ENST00000475540 UBE2D4Q9Y2X8 147 aa1.21□□□□□ -2.22
SMC5-203ENST00000475540 MEGF8Q7Z7M0 2845 aa1.21□□□□□ -2.22
SMC5-203ENST00000475540 BSNQ9UPA5 3926 aa1.21□□□□□ -2.22
SMC5-203ENST00000475540 TLN2Q9Y4G6 2542 aa1.21□□□□□ -2.22
SMC5-203ENST00000475540 MROH2BQ7Z745 1585 aa1.21□□□□□ -2.22
SMC5-203ENST00000475540 WDFY3Q8IZQ1 3526 aa1.2□□□□□ -2.22
SMC5-203ENST00000475540 ZC3H13Q5T200 1668 aaKnown RBP1.2□□□□□ -2.22
SMC5-203ENST00000475540 LRBAP50851 2863 aa1.2□□□□□ -2.22
SMC5-203ENST00000475540 PRRC2CQ9Y520 2896 aaKnown RBP1.2□□□□□ -2.22
SMC5-203ENST00000475540 NIPBLQ6KC79 2804 aaeCLIP1.2□□□□□ -2.22
SMC5-203ENST00000475540 NBPF19A0A087WUL8 3843 aa1.2□□□□□ -2.22
SMC5-203ENST00000475540 A0A1B0GU69 56 aa1.2□□□□□ -2.22
SMC5-203ENST00000475540 PRO0255Q9UI72 69 aa1.2□□□□□ -2.22
SMC5-203ENST00000475540 HIVEP3Q5T1R4 2406 aa1.2□□□□□ -2.22
SMC5-203ENST00000475540 DNAJC13O75165 2243 aa1.2□□□□□ -2.22
SMC5-203ENST00000475540 AHCTF1Q8WYP5 2266 aa1.19□□□□□ -2.22
SMC5-203ENST00000475540 MYMXA0A1B0GTQ4 84 aa1.19□□□□□ -2.22
SMC5-203ENST00000475540 IQCF6A8MYZ5 107 aa1.19□□□□□ -2.22
SMC5-203ENST00000475540 PLGLAQ15195 96 aa1.19□□□□□ -2.22
SMC5-203ENST00000475540 PIGYQ3MUY2 71 aa1.19□□□□□ -2.22
SMC5-203ENST00000475540 PKD1L3Q7Z443 1732 aa1.19□□□□□ -2.22
SMC5-203ENST00000475540 CHD7Q9P2D1 2997 aa1.18□□□□□ -2.22
SMC5-203ENST00000475540 AKAP13Q12802 2813 aa1.18□□□□□ -2.22
SMC5-203ENST00000475540 WFDC2Q14508 124 aa1.18□□□□□ -2.22
SMC5-203ENST00000475540 IQGAP1P46940 1657 aa1.18□□□□□ -2.22
SMC5-203ENST00000475540 HERC2O95714 4834 aa1.18□□□□□ -2.22
SMC5-203ENST00000475540 NSD1Q96L73 2696 aaPredicted RBP1.18□□□□□ -2.22
SMC5-203ENST00000475540 PAPPAQ13219 1627 aa1.18□□□□□ -2.22
SMC5-203ENST00000475540 TENM2Q9NT68 2774 aa1.18□□□□□ -2.22
SMC5-203ENST00000475540 F8P00451 2351 aa1.18□□□□□ -2.22
SMC5-203ENST00000475540 RICTORQ6R327 1708 aa1.18□□□□□ -2.22
SMC5-203ENST00000475540 SAMD9Q5K651 1589 aa1.17□□□□□ -2.22
SMC5-203ENST00000475540 DMDP11532 3685 aa1.17□□□□□ -2.22
SMC5-203ENST00000475540 ABCA13Q86UQ4 5058 aa1.17□□□□□ -2.22
SMC5-203ENST00000475540 LINC00959A0A1B0GUT2 108 aa1.17□□□□□ -2.22
SMC5-203ENST00000475540 I3L2K1 104 aa1.17□□□□□ -2.22
SMC5-203ENST00000475540 MXRA5Q9NR99 2828 aa1.17□□□□□ -2.22
SMC5-203ENST00000475540 TRIOO75962 3097 aa1.17□□□□□ -2.22
SMC5-203ENST00000475540 ITPR2Q14571 2701 aa1.17□□□□□ -2.22
SMC5-203ENST00000475540 CACNA1HO95180 2353 aa1.16□□□□□ -2.22
SMC5-203ENST00000475540 RRBP1Q9P2E9 1410 aaKnown RBP1.16□□□□□ -2.22
SMC5-203ENST00000475540 ZNF469Q96JG9 3925 aaPredicted RBP1.16□□□□□ -2.22
SMC5-203ENST00000475540 DEPDC5O75140 1603 aa1.16□□□□□ -2.22
SMC5-203ENST00000475540 GPR98Q8WXG9 6306 aa1.16□□□□□ -2.22
SMC5-203ENST00000475540 SPENQ96T58 3664 aaKnown RBP1.16□□□□□ -2.22
SMC5-203ENST00000475540 TIAM1Q13009 1591 aa1.16□□□□□ -2.22
SMC5-203ENST00000475540 MAST1Q9Y2H9 1570 aa1.16□□□□□ -2.22
SMC5-203ENST00000475540 OTOGQ6ZRI0 2925 aa1.16□□□□□ -2.22
SMC5-203ENST00000475540 EEA1Q15075 1411 aa1.15□□□□□ -2.22
SMC5-203ENST00000475540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.15□□□□□ -2.22
SMC5-203ENST00000475540 ATP7BP35670 1465 aa1.15□□□□□ -2.23
SMC5-203ENST00000475540 UGGT1Q9NYU2 1555 aa1.15□□□□□ -2.23
SMC5-203ENST00000475540 DOPEY2Q9Y3R5 2298 aa1.15□□□□□ -2.23
SMC5-203ENST00000475540 MGAM2Q2M2H8 2515 aa1.15□□□□□ -2.23
SMC5-203ENST00000475540 FMN2Q9NZ56 1722 aa1.15□□□□□ -2.23
SMC5-203ENST00000475540 ADGRG4Q8IZF6 3080 aa1.14□□□□□ -2.23
SMC5-203ENST00000475540 IGLC3P0DOY3 106 aa1.14□□□□□ -2.23
SMC5-203ENST00000475540 Q8IZM0 81 aa1.14□□□□□ -2.23
SMC5-203ENST00000475540 HERC1Q15751 4861 aa1.13□□□□□ -2.23
SMC5-203ENST00000475540 CCDC141Q6ZP82 1450 aa1.13□□□□□ -2.23
SMC5-203ENST00000475540 ATMQ13315 3056 aa1.13□□□□□ -2.23
SMC5-203ENST00000475540 A0A1B0GUT8 65 aa1.13□□□□□ -2.23
SMC5-203ENST00000475540 CEBPZOSA8MTT3 80 aa1.13□□□□□ -2.23
SMC5-203ENST00000475540 IGLC2P0DOY2 106 aa1.13□□□□□ -2.23
SMC5-203ENST00000475540 EFCAB5A4FU69 1503 aa1.13□□□□□ -2.23
SMC5-203ENST00000475540 MROH2AA6NES4 1674 aa1.13□□□□□ -2.23
SMC5-203ENST00000475540 DMXL2Q8TDJ6 3036 aa1.13□□□□□ -2.23
SMC5-203ENST00000475540 CUBNO60494 3623 aa1.12□□□□□ -2.23
SMC5-203ENST00000475540 DCHS2Q6V1P9 2916 aa1.12□□□□□ -2.23
SMC5-203ENST00000475540 SAMD9LQ8IVG5 1584 aa1.12□□□□□ -2.23
SMC5-203ENST00000475540 LRRC37AA6NMS7 1700 aa1.12□□□□□ -2.23
SMC5-203ENST00000475540 FAT4Q6V0I7 4981 aa1.11□□□□□ -2.23
SMC5-203ENST00000475540 HIVEP1P15822 2718 aa1.11□□□□□ -2.23
SMC5-203ENST00000475540 CSMD2Q7Z408 3487 aa1.11□□□□□ -2.23
SMC5-203ENST00000475540 CCDC88BA6NC98 1476 aa1.11□□□□□ -2.23
SMC5-203ENST00000475540 SCN11AQ9UI33 1791 aa1.11□□□□□ -2.23
SMC5-203ENST00000475540 SLIT1O75093 1534 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms