RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 LINC00167Q96N53 147 aa4.59□□□□□ -1.67
LSAMP-204ENST00000475403 LRP1Q07954 4544 aaKnown RBP4.58□□□□□ -1.68
LSAMP-204ENST00000475403 A0A087WVE0 104 aa4.58□□□□□ -1.68
LSAMP-204ENST00000475403 PLAC8L1A1L4L8 177 aa4.58□□□□□ -1.68
LSAMP-204ENST00000475403 F5H697 171 aa4.58□□□□□ -1.68
LSAMP-204ENST00000475403 H3BNG1 76 aa4.58□□□□□ -1.68
LSAMP-204ENST00000475403 GNRH2O43555 120 aa4.58□□□□□ -1.68
LSAMP-204ENST00000475403 OPRPNQ99935 248 aaPredicted RBP4.58□□□□□ -1.68
LSAMP-204ENST00000475403 TRAV12-3A0A0B4J271 114 aa4.57□□□□□ -1.68
LSAMP-204ENST00000475403 IGHV3-16A0A0C4DH30 117 aa4.57□□□□□ -1.68
LSAMP-204ENST00000475403 ERC2-IT1O76042 136 aa4.57□□□□□ -1.68
LSAMP-204ENST00000475403 SOSTDC1Q6X4U4 206 aa4.57□□□□□ -1.68
LSAMP-204ENST00000475403 C20orf197Q8N268 126 aa4.57□□□□□ -1.68
LSAMP-204ENST00000475403 ZNF625Q96I27 306 aaPredicted RBP4.57□□□□□ -1.68
LSAMP-204ENST00000475403 PKIGQ9Y2B9 76 aa4.57□□□□□ -1.68
LSAMP-204ENST00000475403 A0A096LPF7 62 aa4.56□□□□□ -1.68
LSAMP-204ENST00000475403 IBA57-AS1B1ANH7 110 aa4.56□□□□□ -1.68
LSAMP-204ENST00000475403 C14orf132Q9NPU4 83 aa4.56□□□□□ -1.68
LSAMP-204ENST00000475403 FAM30AQ9NZY2 134 aa4.56□□□□□ -1.68
LSAMP-204ENST00000475403 TRGV2A0A075B6R0 118 aa4.55□□□□□ -1.68
LSAMP-204ENST00000475403 A0A087WWL8 130 aa4.55□□□□□ -1.68
LSAMP-204ENST00000475403 TRBV7-6A0A0J9YX20 115 aa4.55□□□□□ -1.68
LSAMP-204ENST00000475403 PRR15Q8IV56 129 aa4.55□□□□□ -1.68
LSAMP-204ENST00000475403 CHCHD7Q9BUK0 85 aa4.55□□□□□ -1.68
LSAMP-204ENST00000475403 UBL5Q9BZL1 73 aa4.55□□□□□ -1.68
LSAMP-204ENST00000475403 ORMDL1Q9P0S3 153 aa4.55□□□□□ -1.68
LSAMP-204ENST00000475403 FAT3Q8TDW7 4589 aa4.55□□□□□ -1.68
LSAMP-204ENST00000475403 A8MTW9 85 aa4.54□□□□□ -1.68
LSAMP-204ENST00000475403 Q6ZRU5 148 aa4.54□□□□□ -1.68
LSAMP-204ENST00000475403 Q8N814 137 aa4.54□□□□□ -1.68
LSAMP-204ENST00000475403 LINC00467Q9BRT7 94 aa4.54□□□□□ -1.68
LSAMP-204ENST00000475403 CDKN2A-AS1Q9UH64 79 aa4.54□□□□□ -1.68
LSAMP-204ENST00000475403 TRAV23DV6A0A075B6W5 121 aa4.53□□□□□ -1.68
LSAMP-204ENST00000475403 IGHV1OR15-1A0A075B7D0 117 aa4.53□□□□□ -1.68
LSAMP-204ENST00000475403 SMIM1B2RUZ4 78 aa4.53□□□□□ -1.68
LSAMP-204ENST00000475403 H3BQ85 93 aa4.53□□□□□ -1.68
LSAMP-204ENST00000475403 PAX4O43316 350 aa4.53□□□□□ -1.68
LSAMP-204ENST00000475403 CXCL6P80162 114 aa4.53□□□□□ -1.68
LSAMP-204ENST00000475403 LRP2P98164 4655 aa4.53□□□□□ -1.68
LSAMP-204ENST00000475403 SS18Q15532 418 aa4.53□□□□□ -1.68
LSAMP-204ENST00000475403 FAM74A4Q5TZK3 123 aa4.53□□□□□ -1.68
LSAMP-204ENST00000475403 BRK1Q8WUW1 75 aa4.53□□□□□ -1.68
LSAMP-204ENST00000475403 Q9HAA7 133 aa4.53□□□□□ -1.68
LSAMP-204ENST00000475403 A0A087WYN8 130 aa4.52□□□□□ -1.69
LSAMP-204ENST00000475403 TRBV7-4A0A0J9YYF1 115 aa4.52□□□□□ -1.69
LSAMP-204ENST00000475403 F8WEM9 126 aa4.52□□□□□ -1.69
LSAMP-204ENST00000475403 TMEM256-PLSCR3K7ERE1 68 aa4.52□□□□□ -1.69
LSAMP-204ENST00000475403 SCXQ7RTU7 201 aa4.52□□□□□ -1.69
LSAMP-204ENST00000475403 LINC00612Q8N6U2 182 aa4.52□□□□□ -1.69
LSAMP-204ENST00000475403 SMIM11BQ8TCY0 68 aa4.52□□□□□ -1.69
LSAMP-204ENST00000475403 IGKV2-28A0A075B6P5 120 aa4.51□□□□□ -1.69
LSAMP-204ENST00000475403 LOC110117498A0A087WWA1 95 aa4.51□□□□□ -1.69
LSAMP-204ENST00000475403 TRGV1A0A0A0MS02 117 aa4.51□□□□□ -1.69
LSAMP-204ENST00000475403 IGKV2-29A2NJV5 120 aaPredicted RBP4.51□□□□□ -1.69
LSAMP-204ENST00000475403 IGKV2D-28P01615 120 aa4.51□□□□□ -1.69
LSAMP-204ENST00000475403 PDE6GP18545 87 aa4.51□□□□□ -1.69
LSAMP-204ENST00000475403 RBM3P98179 157 aaKnown RBP4.51□□□□□ -1.69
LSAMP-204ENST00000475403 CD164Q04900 197 aa4.51□□□□□ -1.69
LSAMP-204ENST00000475403 C9orf129Q5T035 196 aaKnown RBP4.51□□□□□ -1.69
LSAMP-204ENST00000475403 Q6ZSA8 131 aa4.51□□□□□ -1.69
LSAMP-204ENST00000475403 Q6ZTI0 123 aa4.51□□□□□ -1.69
LSAMP-204ENST00000475403 WFDC10BQ8IUB3 73 aa4.51□□□□□ -1.69
LSAMP-204ENST00000475403 MIR7-3HGQ8N6C7 128 aa4.51□□□□□ -1.69
LSAMP-204ENST00000475403 LINC00337Q8N6G1 96 aa4.51□□□□□ -1.69
LSAMP-204ENST00000475403 SND1-IT1Q9HBX3 110 aa4.51□□□□□ -1.69
LSAMP-204ENST00000475403 PKHD1L1Q86WI1 4243 aa4.51□□□□□ -1.69
LSAMP-204ENST00000475403 LRCOL1A6NCL2 159 aa4.5□□□□□ -1.69
LSAMP-204ENST00000475403 LECT2O14960 151 aa4.5□□□□□ -1.69
LSAMP-204ENST00000475403 RPL37AP61513 92 aaKnown RBP4.5□□□□□ -1.69
LSAMP-204ENST00000475403 PMAIP1Q13794 54 aa4.5□□□□□ -1.69
LSAMP-204ENST00000475403 LINC00242Q5T6M2 205 aa4.5□□□□□ -1.69
LSAMP-204ENST00000475403 ENHOQ6UWT2 76 aa4.5□□□□□ -1.69
LSAMP-204ENST00000475403 FAM19A1Q7Z5A9 133 aa4.5□□□□□ -1.69
LSAMP-204ENST00000475403 DNAH8Q96JB1 4490 aa4.5□□□□□ -1.69
LSAMP-204ENST00000475403 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.49□□□□□ -1.69
LSAMP-204ENST00000475403 NCR3O14931 201 aa4.49□□□□□ -1.69
LSAMP-204ENST00000475403 IGHV3-53P01767 116 aa4.49□□□□□ -1.69
LSAMP-204ENST00000475403 KRTAP9-8Q9BYQ0 159 aa4.49□□□□□ -1.69
LSAMP-204ENST00000475403 PRO0255Q9UI72 69 aa4.49□□□□□ -1.69
LSAMP-204ENST00000475403 TRBV6-4A0A1B0GX49 114 aa4.48□□□□□ -1.69
LSAMP-204ENST00000475403 RMI2Q96E14 147 aa4.48□□□□□ -1.69
LSAMP-204ENST00000475403 TRGV4A0A0C4DH28 118 aa4.47□□□□□ -1.69
LSAMP-204ENST00000475403 GYPEP15421 78 aa4.47□□□□□ -1.69
LSAMP-204ENST00000475403 KRTAP10-4P60372 401 aaPredicted RBP4.47□□□□□ -1.69
LSAMP-204ENST00000475403 COX6A2Q02221 97 aa4.47□□□□□ -1.69
LSAMP-204ENST00000475403 DGAT2L7PQ6IED9 249 aa4.47□□□□□ -1.69
LSAMP-204ENST00000475403 Q6ZQT0 140 aa4.47□□□□□ -1.69
LSAMP-204ENST00000475403 KRTAP9-2Q9BYQ4 174 aa4.47□□□□□ -1.69
LSAMP-204ENST00000475403 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.46□□□□□ -1.7
LSAMP-204ENST00000475403 IGHV3-38A0A0C4DH36 116 aa4.46□□□□□ -1.7
LSAMP-204ENST00000475403 ZNF561-AS1K7EIQ3 104 aa4.46□□□□□ -1.7
LSAMP-204ENST00000475403 K7EQD1 137 aa4.46□□□□□ -1.7
LSAMP-204ENST00000475403 LINC01547P58512 204 aaPredicted RBP4.46□□□□□ -1.7
LSAMP-204ENST00000475403 RPL36AP83881 106 aaKnown RBP4.46□□□□□ -1.7
LSAMP-204ENST00000475403 Q1T7F1 81 aa4.46□□□□□ -1.7
LSAMP-204ENST00000475403 RNASE13Q5GAN3 156 aaKnown RBP4.46□□□□□ -1.7
LSAMP-204ENST00000475403 C11orf72Q8NBR9 251 aa4.46□□□□□ -1.7
LSAMP-204ENST00000475403 CIRBP-AS1Q8TBR5 109 aa4.46□□□□□ -1.7
LSAMP-204ENST00000475403 COX7B2Q8TF08 81 aa4.46□□□□□ -1.7
LSAMP-204ENST00000475403 RPL36ALQ969Q0 106 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms