RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 LEPROTO15243 131 aa10.99□□□□□ -0.65
VPS36-203ENST00000475375 NDUFC2O95298 119 aa10.99□□□□□ -0.65
VPS36-203ENST00000475375 HINT1P49773 126 aaPredicted RBP10.99□□□□□ -0.65
VPS36-203ENST00000475375 IFITM2Q01629 132 aa10.99□□□□□ -0.65
VPS36-203ENST00000475375 SLC25A34Q6PIV7 304 aa10.99□□□□□ -0.65
VPS36-203ENST00000475375 C5orf52A6NGY3 159 aa10.98□□□□□ -0.65
VPS36-203ENST00000475375 NPC2P61916 151 aa10.97□□□□□ -0.65
VPS36-203ENST00000475375 LAMTOR3Q9UHA4 124 aa10.96□□□□□ -0.65
VPS36-203ENST00000475375 J3QQQ9 107 aa10.95□□□□□ -0.66
VPS36-203ENST00000475375 LGALS3P17931 250 aaKnown RBP10.93□□□□□ -0.66
VPS36-203ENST00000475375 SPRR1BP22528 89 aa10.93□□□□□ -0.66
VPS36-203ENST00000475375 C10orf91Q5T1B1 145 aa10.93□□□□□ -0.66
VPS36-203ENST00000475375 CBY1Q9Y3M2 126 aa10.93□□□□□ -0.66
VPS36-203ENST00000475375 H7C2G1 150 aa10.92□□□□□ -0.66
VPS36-203ENST00000475375 HSBP1O75506 76 aa10.92□□□□□ -0.66
VPS36-203ENST00000475375 NMUP48645 174 aa10.92□□□□□ -0.66
VPS36-203ENST00000475375 FLGP20930 4061 aaPredicted RBP10.92□□□□□ -0.66
VPS36-203ENST00000475375 HERVK_113P61574 105 aa10.91□□□□□ -0.66
VPS36-203ENST00000475375 SOSTDC1Q6X4U4 206 aa10.91□□□□□ -0.66
VPS36-203ENST00000475375 PLNP26678 52 aa10.9□□□□□ -0.66
VPS36-203ENST00000475375 DHRS4-AS1Q9P1J3 65 aa10.9□□□□□ -0.66
VPS36-203ENST00000475375 EIF4EBP3O60516 100 aaPredicted RBP10.89□□□□□ -0.67
VPS36-203ENST00000475375 RPL37P61927 97 aaKnown RBP10.89□□□□□ -0.67
VPS36-203ENST00000475375 Q1RN00 199 aa10.89□□□□□ -0.67
VPS36-203ENST00000475375 OR13C6PQ8NH95 151 aa10.89□□□□□ -0.67
VPS36-203ENST00000475375 CD164Q04900 197 aa10.88□□□□□ -0.67
VPS36-203ENST00000475375 PRO1933Q9H354 126 aa10.88□□□□□ -0.67
VPS36-203ENST00000475375 DEFB105AQ8NG35 78 aa10.87□□□□□ -0.67
VPS36-203ENST00000475375 TAL2Q16559 108 aa10.86□□□□□ -0.67
VPS36-203ENST00000475375 ADAMTSL4-AS1Q5T5F5 129 aa10.86□□□□□ -0.67
VPS36-203ENST00000475375 KRTAP9-7A8MTY7 169 aa10.85□□□□□ -0.67
VPS36-203ENST00000475375 DPM2O94777 84 aa10.85□□□□□ -0.67
VPS36-203ENST00000475375 PMCHL2Q9BQD1 86 aa10.85□□□□□ -0.67
VPS36-203ENST00000475375 LEPROTL1O95214 131 aa10.84□□□□□ -0.67
VPS36-203ENST00000475375 C1orf195Q5TG92 126 aa10.84□□□□□ -0.67
VPS36-203ENST00000475375 A0A0J9YXY3 114 aa10.83□□□□□ -0.68
VPS36-203ENST00000475375 APOC3P02656 99 aa10.82□□□□□ -0.68
VPS36-203ENST00000475375 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.81□□□□□ -0.68
VPS36-203ENST00000475375 IGKCP01834 107 aa10.81□□□□□ -0.68
VPS36-203ENST00000475375 COX7BP24311 80 aa10.81□□□□□ -0.68
VPS36-203ENST00000475375 AKR1D1P51857 326 aa10.8□□□□□ -0.68
VPS36-203ENST00000475375 Q5XG85 94 aa10.8□□□□□ -0.68
VPS36-203ENST00000475375 SPANXCQ9NY87 97 aa10.8□□□□□ -0.68
VPS36-203ENST00000475375 Q6Q795 121 aa10.79□□□□□ -0.68
VPS36-203ENST00000475375 TEX49A0A1B0GTD5 131 aa10.78□□□□□ -0.68
VPS36-203ENST00000475375 SNAPINO95295 136 aa10.78□□□□□ -0.68
VPS36-203ENST00000475375 ELOF1P60002 83 aaKnown RBP10.78□□□□□ -0.68
VPS36-203ENST00000475375 FABP4P15090 132 aa10.77□□□□□ -0.69
VPS36-203ENST00000475375 LINC00308Q8TCZ7 52 aa10.77□□□□□ -0.69
VPS36-203ENST00000475375 SPANXDQ9BXN6 97 aa10.77□□□□□ -0.69
VPS36-203ENST00000475375 HSPB8Q9UJY1 196 aa10.77□□□□□ -0.69
VPS36-203ENST00000475375 A0A0G2JQZ4 141 aa10.76□□□□□ -0.69
VPS36-203ENST00000475375 C6orf99Q4VX62 202 aa10.76□□□□□ -0.69
VPS36-203ENST00000475375 SMIM29Q86T20 159 aa10.76□□□□□ -0.69
VPS36-203ENST00000475375 NDUFA5Q16718 116 aa10.75□□□□□ -0.69
VPS36-203ENST00000475375 SVBPQ8N300 66 aa10.75□□□□□ -0.69
VPS36-203ENST00000475375 SERF1AO75920 110 aa10.74□□□□□ -0.69
VPS36-203ENST00000475375 YPEL4Q96NS1 127 aa10.73□□□□□ -0.69
VPS36-203ENST00000475375 E9PLD3 99 aa10.71□□□□□ -0.69
VPS36-203ENST00000475375 TCL1BO95988 128 aa10.7□□□□□ -0.7
VPS36-203ENST00000475375 LINC00310P59036 64 aa10.7□□□□□ -0.7
VPS36-203ENST00000475375 LITAFQ99732 161 aa10.7□□□□□ -0.7
VPS36-203ENST00000475375 TIMM17BO60830 172 aa10.67□□□□□ -0.7
VPS36-203ENST00000475375 TRGC2P03986 189 aa10.67□□□□□ -0.7
VPS36-203ENST00000475375 LINC00518Q8N0U6 118 aa10.67□□□□□ -0.7
VPS36-203ENST00000475375 CFC1P0CG37 223 aa10.65□□□□□ -0.7
VPS36-203ENST00000475375 ATP11AUNQ6ZP68 121 aa10.65□□□□□ -0.7
VPS36-203ENST00000475375 SSPOA2VEC9 5147 aa10.65□□□□□ -0.7
VPS36-203ENST00000475375 IGLV5-48A0A075B6I7 105 aa10.64□□□□□ -0.71
VPS36-203ENST00000475375 PCP2Q8IVA1 136 aa10.64□□□□□ -0.71
VPS36-203ENST00000475375 TRBV7-6A0A0J9YX20 115 aa10.63□□□□□ -0.71
VPS36-203ENST00000475375 A0A1B0GWB2 263 aa10.62□□□□□ -0.71
VPS36-203ENST00000475375 ZNF815PA8K554 130 aa10.62□□□□□ -0.71
VPS36-203ENST00000475375 USH2AO75445 5202 aa10.61□□□□□ -0.71
VPS36-203ENST00000475375 OBSCN-AS1Q96MR7 158 aa10.58□□□□□ -0.72
VPS36-203ENST00000475375 A6NDN8 102 aa10.57□□□□□ -0.72
VPS36-203ENST00000475375 F8WEM9 126 aa10.57□□□□□ -0.72
VPS36-203ENST00000475375 KRTAP9-8Q9BYQ0 159 aa10.56□□□□□ -0.72
VPS36-203ENST00000475375 TTTY13Q9BZ97 58 aa10.56□□□□□ -0.72
VPS36-203ENST00000475375 Q75L30 129 aa10.55□□□□□ -0.72
VPS36-203ENST00000475375 NHP2Q9NX24 153 aaKnown RBP10.54□□□□□ -0.72
VPS36-203ENST00000475375 A4D1N5 150 aa10.53□□□□□ -0.72
VPS36-203ENST00000475375 C20orf202A1L168 122 aa10.52□□□□□ -0.73
VPS36-203ENST00000475375 SYS1-DBNDD2H3BUS1 97 aa10.52□□□□□ -0.73
VPS36-203ENST00000475375 SCGB1D4Q6XE38 83 aa10.5□□□□□ -0.73
VPS36-203ENST00000475375 COPS9Q8WXC6 57 aa10.5□□□□□ -0.73
VPS36-203ENST00000475375 FCGBPQ9Y6R7 5405 aaPredicted RBP10.49□□□□□ -0.73
VPS36-203ENST00000475375 TRBV7-7A0A0K0K1E9 115 aa10.47□□□□□ -0.73
VPS36-203ENST00000475375 LINC01545Q5VT33 79 aa10.47□□□□□ -0.73
VPS36-203ENST00000475375 TRBV20-1A0A075B6N2 111 aa10.46□□□□□ -0.73
VPS36-203ENST00000475375 Q96NJ1 140 aa10.46□□□□□ -0.73
VPS36-203ENST00000475375 Q6JHZ5 121 aa10.45□□□□□ -0.74
VPS36-203ENST00000475375 SLC7A5P1Q8MH63 180 aa10.45□□□□□ -0.74
VPS36-203ENST00000475375 CLEC2BQ92478 149 aa10.45□□□□□ -0.74
VPS36-203ENST00000475375 IFITM1P13164 125 aa10.44□□□□□ -0.74
VPS36-203ENST00000475375 SMIM11BQ8TCY0 68 aa10.44□□□□□ -0.74
VPS36-203ENST00000475375 PET117Q6UWS5 81 aa10.43□□□□□ -0.74
VPS36-203ENST00000475375 IGFL1Q6UW32 110 aa10.42□□□□□ -0.74
VPS36-203ENST00000475375 MUSTN1Q8IVN3 82 aa10.42□□□□□ -0.74
VPS36-203ENST00000475375 TRAV13-2A0A0B4J235 113 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms