RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 C22orf24Q9Y442 160 aa8.5□□□□□ -1.05
RTN1-205ENST00000474911 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.5□□□□□ -1.05
RTN1-205ENST00000474911 H3BUT2 72 aa8.49□□□□□ -1.05
RTN1-205ENST00000474911 PANO1I0J062 215 aa8.49□□□□□ -1.05
RTN1-205ENST00000474911 M0QXV9 152 aa8.49□□□□□ -1.05
RTN1-205ENST00000474911 MRPL55Q7Z7F7 128 aaKnown RBP8.49□□□□□ -1.05
RTN1-205ENST00000474911 C7orf33Q8WU49 177 aa8.49□□□□□ -1.05
RTN1-205ENST00000474911 DPH3Q96FX2 82 aa8.49□□□□□ -1.05
RTN1-205ENST00000474911 CBY1Q9Y3M2 126 aa8.49□□□□□ -1.05
RTN1-205ENST00000474911 TRBV10-3A0A0K0K1G6 114 aa8.48□□□□□ -1.05
RTN1-205ENST00000474911 SCXQ7RTU7 201 aa8.48□□□□□ -1.05
RTN1-205ENST00000474911 NAA38Q9BRA0 125 aaKnown RBP8.48□□□□□ -1.05
RTN1-205ENST00000474911 PSMB2P49721 201 aa8.47□□□□□ -1.05
RTN1-205ENST00000474911 SMIM11BQ8TCY0 68 aa8.47□□□□□ -1.05
RTN1-205ENST00000474911 VPS13BQ7Z7G8 4022 aa8.47□□□□□ -1.05
RTN1-205ENST00000474911 GAGE10A6NGK3 116 aa8.46□□□□□ -1.05
RTN1-205ENST00000474911 INAFM2P0DMQ5 153 aa8.46□□□□□ -1.05
RTN1-205ENST00000474911 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.05
RTN1-205ENST00000474911 LINC00167Q96N53 147 aa8.46□□□□□ -1.05
RTN1-205ENST00000474911 FAT1Q14517 4588 aa8.46□□□□□ -1.05
RTN1-205ENST00000474911 LYRM7Q5U5X0 104 aa8.46□□□□□ -1.06
RTN1-205ENST00000474911 CIRBP-AS1Q8TBR5 109 aa8.46□□□□□ -1.06
RTN1-205ENST00000474911 TRAV23DV6A0A075B6W5 121 aa8.45□□□□□ -1.06
RTN1-205ENST00000474911 A0A087WYN8 130 aa8.45□□□□□ -1.06
RTN1-205ENST00000474911 A0A1W2PPM0 123 aa8.45□□□□□ -1.06
RTN1-205ENST00000474911 TRIAP1O43715 76 aa8.45□□□□□ -1.06
RTN1-205ENST00000474911 PLA2G1BP04054 148 aaKnown RBP8.45□□□□□ -1.06
RTN1-205ENST00000474911 COX6CP09669 75 aa8.45□□□□□ -1.06
RTN1-205ENST00000474911 PLAC8Q9NZF1 115 aa8.45□□□□□ -1.06
RTN1-205ENST00000474911 IGLV1-50A0A075B6I6 118 aa8.44□□□□□ -1.06
RTN1-205ENST00000474911 FABP2P12104 132 aa8.44□□□□□ -1.06
RTN1-205ENST00000474911 KCNQ1DNQ9H478 68 aa8.44□□□□□ -1.06
RTN1-205ENST00000474911 RPL37AP8A6NKH3 93 aa8.43□□□□□ -1.06
RTN1-205ENST00000474911 PRYO14603 147 aa8.43□□□□□ -1.06
RTN1-205ENST00000474911 SCGB1C2P0DMR2 95 aa8.43□□□□□ -1.06
RTN1-205ENST00000474911 PHF5AQ7RTV0 110 aaKnown RBP8.42□□□□□ -1.06
RTN1-205ENST00000474911 SRRM2Q9UQ35 2752 aaKnown RBP8.42□□□□□ -1.06
RTN1-205ENST00000474911 ZNF73O43830 326 aaPredicted RBP8.41□□□□□ -1.06
RTN1-205ENST00000474911 UBE2BP63146 152 aa8.41□□□□□ -1.06
RTN1-205ENST00000474911 VAMP3Q15836 100 aa8.41□□□□□ -1.06
RTN1-205ENST00000474911 C6orf99Q4VX62 202 aa8.41□□□□□ -1.06
RTN1-205ENST00000474911 DIRC1Q969H9 104 aa8.41□□□□□ -1.06
RTN1-205ENST00000474911 A0A1B0GV90 55 aa8.4□□□□□ -1.06
RTN1-205ENST00000474911 H0YGX0 51 aa8.39□□□□□ -1.07
RTN1-205ENST00000474911 TRBV20-1A0A075B6N2 111 aa8.38□□□□□ -1.07
RTN1-205ENST00000474911 TRBV7-6A0A0J9YX20 115 aa8.38□□□□□ -1.07
RTN1-205ENST00000474911 REG3GQ6UW15 175 aa8.38□□□□□ -1.07
RTN1-205ENST00000474911 SPCS1Q9Y6A9 102 aa8.38□□□□□ -1.07
RTN1-205ENST00000474911 FLG2Q5D862 2391 aaPredicted RBP8.38□□□□□ -1.07
RTN1-205ENST00000474911 SPRR1AP35321 89 aa8.37□□□□□ -1.07
RTN1-205ENST00000474911 KRTAP10-4P60372 401 aaPredicted RBP8.37□□□□□ -1.07
RTN1-205ENST00000474911 CLEC2BQ92478 149 aa8.37□□□□□ -1.07
RTN1-205ENST00000474911 K7EP34 96 aa8.36□□□□□ -1.07
RTN1-205ENST00000474911 TCL1BO95988 128 aa8.36□□□□□ -1.07
RTN1-205ENST00000474911 COX7BP24311 80 aa8.36□□□□□ -1.07
RTN1-205ENST00000474911 ELOF1P60002 83 aaKnown RBP8.36□□□□□ -1.07
RTN1-205ENST00000474911 ATXN8Q156A1 80 aa8.36□□□□□ -1.07
RTN1-205ENST00000474911 GTF2H5Q6ZYL4 71 aa8.36□□□□□ -1.07
RTN1-205ENST00000474911 ETDCA0A1B0GVM5 59 aa8.35□□□□□ -1.07
RTN1-205ENST00000474911 KRTAP11-1Q8IUC1 163 aa8.35□□□□□ -1.07
RTN1-205ENST00000474911 KRTAP4-16G5E9R7 235 aaPredicted RBP8.34□□□□□ -1.07
RTN1-205ENST00000474911 LST1O00453 97 aa8.34□□□□□ -1.07
RTN1-205ENST00000474911 SNCGO76070 127 aa8.33□□□□□ -1.08
RTN1-205ENST00000474911 FAM218AQ96MZ4 157 aa8.33□□□□□ -1.08
RTN1-205ENST00000474911 MYCBP2O75592 4640 aa8.32□□□□□ -1.08
RTN1-205ENST00000474911 A0A1B0GX51 115 aa8.32□□□□□ -1.08
RTN1-205ENST00000474911 B5MCH6 92 aa8.32□□□□□ -1.08
RTN1-205ENST00000474911 RPL37AP61513 92 aaKnown RBP8.32□□□□□ -1.08
RTN1-205ENST00000474911 LINC00575Q6W349 94 aa8.32□□□□□ -1.08
RTN1-205ENST00000474911 Q6ZRX8 168 aa8.32□□□□□ -1.08
RTN1-205ENST00000474911 DMBT1Q9UGM3 2413 aaPredicted RBP8.32□□□□□ -1.08
RTN1-205ENST00000474911 SLC25A20O43772 301 aa8.31□□□□□ -1.08
RTN1-205ENST00000474911 TRACP01848 142 aa8.31□□□□□ -1.08
RTN1-205ENST00000474911 FAM19A1Q7Z5A9 133 aa8.31□□□□□ -1.08
RTN1-205ENST00000474911 H3BMG7 143 aa8.3□□□□□ -1.08
RTN1-205ENST00000474911 BCE1O60756 84 aa8.3□□□□□ -1.08
RTN1-205ENST00000474911 LOC100996750A0A140TA64 210 aa8.29□□□□□ -1.08
RTN1-205ENST00000474911 hADV29S1A0JD25 119 aa8.29□□□□□ -1.08
RTN1-205ENST00000474911 UBE2V1Q13404 147 aa8.29□□□□□ -1.08
RTN1-205ENST00000474911 KRTAP4-6Q9BYQ5 205 aa8.29□□□□□ -1.08
RTN1-205ENST00000474911 DHRS4-AS1Q9P1J3 65 aa8.29□□□□□ -1.08
RTN1-205ENST00000474911 PSORS1C2Q9UIG4 136 aa8.29□□□□□ -1.08
RTN1-205ENST00000474911 KRTAP29-1A8MX34 341 aaPredicted RBP8.29□□□□□ -1.08
RTN1-205ENST00000474911 DNAL4O96015 105 aa8.29□□□□□ -1.08
RTN1-205ENST00000474911 H0Y9J4 135 aa8.28□□□□□ -1.08
RTN1-205ENST00000474911 UBE2AP49459 152 aa8.28□□□□□ -1.08
RTN1-205ENST00000474911 PRLHP81277 87 aa8.27□□□□□ -1.09
RTN1-205ENST00000474911 C9JAW5 83 aa8.26□□□□□ -1.09
RTN1-205ENST00000474911 C1orf137Q5JT78 98 aa8.26□□□□□ -1.09
RTN1-205ENST00000474911 Q9BRP9 147 aa8.26□□□□□ -1.09
RTN1-205ENST00000474911 OXTP01178 125 aa8.24□□□□□ -1.09
RTN1-205ENST00000474911 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.24□□□□□ -1.09
RTN1-205ENST00000474911 KRTAP13-1Q8IUC0 172 aa8.24□□□□□ -1.09
RTN1-205ENST00000474911 Q6ZQY7 126 aa8.23□□□□□ -1.09
RTN1-205ENST00000474911 SMCR5Q8TEV8 140 aa8.23□□□□□ -1.09
RTN1-205ENST00000474911 HIGD2AQ9BW72 106 aa8.23□□□□□ -1.09
RTN1-205ENST00000474911 ORMDL1Q9P0S3 153 aa8.23□□□□□ -1.09
RTN1-205ENST00000474911 F8W1H4 67 aa8.21□□□□□ -1.09
RTN1-205ENST00000474911 H3BQ85 93 aa8.21□□□□□ -1.09
RTN1-205ENST00000474911 H3BT86 120 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms