RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 LINC00167Q96N53 147 aa9.16□□□□□ -0.94
SRRT-209ENST00000474896 RPL37AP8A6NKH3 93 aa9.15□□□□□ -0.94
SRRT-209ENST00000474896 NCR3O14931 201 aa9.15□□□□□ -0.94
SRRT-209ENST00000474896 NDUFC2O95298 119 aa9.15□□□□□ -0.94
SRRT-209ENST00000474896 C2orf91Q6ZV80 131 aa9.15□□□□□ -0.94
SRRT-209ENST00000474896 M0R378 163 aa9.14□□□□□ -0.95
SRRT-209ENST00000474896 LCE2AQ5TA79 106 aaPredicted RBP9.14□□□□□ -0.95
SRRT-209ENST00000474896 MUSTN1Q8IVN3 82 aa9.14□□□□□ -0.95
SRRT-209ENST00000474896 COPS9Q8WXC6 57 aa9.14□□□□□ -0.95
SRRT-209ENST00000474896 PPDPFQ9H3Y8 114 aa9.14□□□□□ -0.95
SRRT-209ENST00000474896 HIGD1BQ9P298 99 aa9.14□□□□□ -0.95
SRRT-209ENST00000474896 UQCR10Q9UDW1 63 aa9.12□□□□□ -0.95
SRRT-209ENST00000474896 IGKV2-28A0A075B6P5 120 aa9.11□□□□□ -0.95
SRRT-209ENST00000474896 TRBV10-2A0A0K0K1G8 114 aa9.11□□□□□ -0.95
SRRT-209ENST00000474896 IGKV2D-28P01615 120 aa9.11□□□□□ -0.95
SRRT-209ENST00000474896 KRTAP13-2Q52LG2 175 aa9.11□□□□□ -0.95
SRRT-209ENST00000474896 HIST1H4GQ99525 98 aa9.11□□□□□ -0.95
SRRT-209ENST00000474896 C12orf57Q99622 126 aa9.11□□□□□ -0.95
SRRT-209ENST00000474896 RETNLBQ9BQ08 111 aa9.11□□□□□ -0.95
SRRT-209ENST00000474896 PRO1933Q9H354 126 aa9.09□□□□□ -0.95
SRRT-209ENST00000474896 TRBV10-3A0A0K0K1G6 114 aa9.08□□□□□ -0.96
SRRT-209ENST00000474896 UBE2AP49459 152 aa9.08□□□□□ -0.96
SRRT-209ENST00000474896 DDTP30046 118 aa9.07□□□□□ -0.96
SRRT-209ENST00000474896 S100A7L2Q5SY68 101 aa9.07□□□□□ -0.96
SRRT-209ENST00000474896 KRTAP13-1Q8IUC0 172 aa9.07□□□□□ -0.96
SRRT-209ENST00000474896 LINC00518Q8N0U6 118 aa9.07□□□□□ -0.96
SRRT-209ENST00000474896 LINC00304Q8N9R0 145 aa9.07□□□□□ -0.96
SRRT-209ENST00000474896 A4D1N5 150 aa9.06□□□□□ -0.96
SRRT-209ENST00000474896 TAL2Q16559 108 aa9.06□□□□□ -0.96
SRRT-209ENST00000474896 FAM229BQ4G0N7 80 aa9.06□□□□□ -0.96
SRRT-209ENST00000474896 CDIP1Q9H305 208 aa9.06□□□□□ -0.96
SRRT-209ENST00000474896 FAT4Q6V0I7 4981 aa9.05□□□□□ -0.96
SRRT-209ENST00000474896 IGLV6-57P01721 117 aa9.05□□□□□ -0.96
SRRT-209ENST00000474896 LINC00337Q8N6G1 96 aa9.05□□□□□ -0.96
SRRT-209ENST00000474896 IGLV7-46A0A075B6I9 117 aa9.04□□□□□ -0.96
SRRT-209ENST00000474896 PRYO14603 147 aa9.04□□□□□ -0.96
SRRT-209ENST00000474896 OR13C6PQ8NH95 151 aa9.04□□□□□ -0.96
SRRT-209ENST00000474896 TMEM126AQ9H061 195 aa9.04□□□□□ -0.96
SRRT-209ENST00000474896 KCNQ1DNQ9H478 68 aa9.04□□□□□ -0.96
SRRT-209ENST00000474896 HSD52Q0P140 79 aa9.03□□□□□ -0.96
SRRT-209ENST00000474896 CEND1Q8N111 149 aa9.03□□□□□ -0.96
SRRT-209ENST00000474896 KRTAP9-6A0A140TA67 174 aa9.02□□□□□ -0.97
SRRT-209ENST00000474896 TPRXLQ17RH7 258 aa9.02□□□□□ -0.97
SRRT-209ENST00000474896 TRAV23DV6A0A075B6W5 121 aa9.01□□□□□ -0.97
SRRT-209ENST00000474896 A6NDN8 102 aa9.01□□□□□ -0.97
SRRT-209ENST00000474896 TSTD3H0UI37 97 aa9.01□□□□□ -0.97
SRRT-209ENST00000474896 TRAV13-2A0A0B4J235 113 aa9□□□□□ -0.97
SRRT-209ENST00000474896 SPRR1AP35321 89 aa9□□□□□ -0.97
SRRT-209ENST00000474896 PRLHP81277 87 aa9□□□□□ -0.97
SRRT-209ENST00000474896 CBY1Q9Y3M2 126 aa9□□□□□ -0.97
SRRT-209ENST00000474896 FXYD2P54710 66 aa8.99□□□□□ -0.97
SRRT-209ENST00000474896 FAM19A1Q7Z5A9 133 aa8.99□□□□□ -0.97
SRRT-209ENST00000474896 TMEM238LA0A1B0GVL6 79 aa8.98□□□□□ -0.97
SRRT-209ENST00000474896 A6NJY4 79 aa8.98□□□□□ -0.97
SRRT-209ENST00000474896 KRTAP4-16G5E9R7 235 aaPredicted RBP8.98□□□□□ -0.97
SRRT-209ENST00000474896 CTAG1AP78358 180 aa8.98□□□□□ -0.97
SRRT-209ENST00000474896 MUC17Q685J3 4493 aa8.98□□□□□ -0.97
SRRT-209ENST00000474896 ZNF73O43830 326 aaPredicted RBP8.97□□□□□ -0.97
SRRT-209ENST00000474896 CFC1BP0CG36 223 aa8.97□□□□□ -0.97
SRRT-209ENST00000474896 CFC1P0CG37 223 aa8.97□□□□□ -0.97
SRRT-209ENST00000474896 A0A0B4J2C4 111 aa8.96□□□□□ -0.98
SRRT-209ENST00000474896 ETDCA0A1B0GVM5 59 aa8.96□□□□□ -0.98
SRRT-209ENST00000474896 C3orf22Q8N5N4 141 aa8.95□□□□□ -0.98
SRRT-209ENST00000474896 RAB37Q96AX2 223 aa8.95□□□□□ -0.98
SRRT-209ENST00000474896 B5MCH6 92 aa8.94□□□□□ -0.98
SRRT-209ENST00000474896 C6orf99Q4VX62 202 aa8.93□□□□□ -0.98
SRRT-209ENST00000474896 SMIM11BQ8TCY0 68 aa8.93□□□□□ -0.98
SRRT-209ENST00000474896 NHP2Q9NX24 153 aaKnown RBP8.93□□□□□ -0.98
SRRT-209ENST00000474896 HINT1P49773 126 aaPredicted RBP8.92□□□□□ -0.98
SRRT-209ENST00000474896 BVES-AS1Q5T3Y7 98 aa8.92□□□□□ -0.98
SRRT-209ENST00000474896 SPAG11AQ6PDA7 123 aa8.91□□□□□ -0.98
SRRT-209ENST00000474896 Q6ZRX8 168 aa8.91□□□□□ -0.98
SRRT-209ENST00000474896 HIGD2AQ9BW72 106 aa8.91□□□□□ -0.98
SRRT-209ENST00000474896 PRO1854Q9UHT4 67 aa8.91□□□□□ -0.98
SRRT-209ENST00000474896 A0A1B0GWB2 263 aa8.9□□□□□ -0.98
SRRT-209ENST00000474896 H7C2G1 150 aa8.9□□□□□ -0.98
SRRT-209ENST00000474896 M0R143 59 aa8.9□□□□□ -0.98
SRRT-209ENST00000474896 K7ERJ3 54 aa8.89□□□□□ -0.99
SRRT-209ENST00000474896 COX7BP24311 80 aa8.89□□□□□ -0.99
SRRT-209ENST00000474896 ELOF1P60002 83 aaKnown RBP8.89□□□□□ -0.99
SRRT-209ENST00000474896 TRBV7-6A0A0J9YX20 115 aa8.88□□□□□ -0.99
SRRT-209ENST00000474896 C4orf48Q5BLP8 95 aa8.88□□□□□ -0.99
SRRT-209ENST00000474896 SMCR5Q8TEV8 140 aa8.88□□□□□ -0.99
SRRT-209ENST00000474896 Q9BRP9 147 aa8.88□□□□□ -0.99
SRRT-209ENST00000474896 FP248Q71RG6 208 aaPredicted RBP8.87□□□□□ -0.99
SRRT-209ENST00000474896 SPRR4Q96PI1 79 aa8.87□□□□□ -0.99
SRRT-209ENST00000474896 Q1RN00 199 aa8.86□□□□□ -0.99
SRRT-209ENST00000474896 ERC2-IT1O76042 136 aa8.84□□□□□ -0.99
SRRT-209ENST00000474896 VAMP3Q15836 100 aa8.84□□□□□ -0.99
SRRT-209ENST00000474896 KRTAP13-3Q3SY46 172 aa8.84□□□□□ -0.99
SRRT-209ENST00000474896 ASB16-AS1Q495Z4 193 aa8.83□□□□□ -1
SRRT-209ENST00000474896 Q8NBF4 154 aa8.83□□□□□ -1
SRRT-209ENST00000474896 DHRS4-AS1Q9P1J3 65 aa8.83□□□□□ -1
SRRT-209ENST00000474896 BATFQ16520 125 aa8.82□□□□□ -1
SRRT-209ENST00000474896 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
SRRT-209ENST00000474896 LINC01547P58512 204 aaPredicted RBP8.81□□□□□ -1
SRRT-209ENST00000474896 KRTAP4-1Q9BYQ7 146 aa8.8□□□□□ -1
SRRT-209ENST00000474896 TRIAP1O43715 76 aa8.79□□□□□ -1
SRRT-209ENST00000474896 LINC00575Q6W349 94 aa8.79□□□□□ -1
SRRT-209ENST00000474896 SPINK1P00995 79 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms