RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 SMR3BP02814 79 aaPredicted RBP6.21□□□□□ -1.42
COL8A1-206ENST00000474648 CFC1BP0CG36 223 aa6.21□□□□□ -1.42
COL8A1-206ENST00000474648 CFC1P0CG37 223 aa6.21□□□□□ -1.42
COL8A1-206ENST00000474648 DDTP30046 118 aa6.21□□□□□ -1.42
COL8A1-206ENST00000474648 BVES-AS1Q5T3Y7 98 aa6.21□□□□□ -1.42
COL8A1-206ENST00000474648 VPS13BQ7Z7G8 4022 aa6.2□□□□□ -1.42
COL8A1-206ENST00000474648 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
COL8A1-206ENST00000474648 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
COL8A1-206ENST00000474648 HINT1P49773 126 aaPredicted RBP6.19□□□□□ -1.42
COL8A1-206ENST00000474648 KCNQ1DNQ9H478 68 aa6.19□□□□□ -1.42
COL8A1-206ENST00000474648 TRAV13-2A0A0B4J235 113 aa6.18□□□□□ -1.42
COL8A1-206ENST00000474648 A0A1B0GWB2 263 aa6.18□□□□□ -1.42
COL8A1-206ENST00000474648 UBE2BP63146 152 aa6.18□□□□□ -1.42
COL8A1-206ENST00000474648 S100A7L2Q5SY68 101 aa6.18□□□□□ -1.42
COL8A1-206ENST00000474648 OR13C6PQ8NH95 151 aa6.18□□□□□ -1.42
COL8A1-206ENST00000474648 TMEM126AQ9H061 195 aa6.18□□□□□ -1.42
COL8A1-206ENST00000474648 PSORS1C2Q9UIG4 136 aa6.18□□□□□ -1.42
COL8A1-206ENST00000474648 A0A0B4J2C4 111 aa6.17□□□□□ -1.42
COL8A1-206ENST00000474648 A6NDN8 102 aa6.17□□□□□ -1.42
COL8A1-206ENST00000474648 KRTAP10-4P60372 401 aaPredicted RBP6.17□□□□□ -1.42
COL8A1-206ENST00000474648 KRTAP4-16G5E9R7 235 aaPredicted RBP6.16□□□□□ -1.42
COL8A1-206ENST00000474648 SPRR1AP35321 89 aa6.16□□□□□ -1.42
COL8A1-206ENST00000474648 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
COL8A1-206ENST00000474648 NHP2Q9NX24 153 aaKnown RBP6.16□□□□□ -1.42
COL8A1-206ENST00000474648 K7ERJ3 54 aa6.15□□□□□ -1.42
COL8A1-206ENST00000474648 M0R143 59 aa6.15□□□□□ -1.42
COL8A1-206ENST00000474648 PRYO14603 147 aa6.15□□□□□ -1.42
COL8A1-206ENST00000474648 REG3GQ6UW15 175 aa6.15□□□□□ -1.42
COL8A1-206ENST00000474648 RAB37Q96AX2 223 aa6.15□□□□□ -1.42
COL8A1-206ENST00000474648 TRAV23DV6A0A075B6W5 121 aa6.14□□□□□ -1.43
COL8A1-206ENST00000474648 PCP4L1A6NKN8 68 aa6.14□□□□□ -1.43
COL8A1-206ENST00000474648 RPL13AP40429 203 aaKnown RBP6.14□□□□□ -1.43
COL8A1-206ENST00000474648 C1orf137Q5JT78 98 aa6.14□□□□□ -1.43
COL8A1-206ENST00000474648 SMIM11BQ8TCY0 68 aa6.14□□□□□ -1.43
COL8A1-206ENST00000474648 PRO1854Q9UHT4 67 aa6.14□□□□□ -1.43
COL8A1-206ENST00000474648 ZNF73O43830 326 aaPredicted RBP6.13□□□□□ -1.43
COL8A1-206ENST00000474648 BCE1O60756 84 aa6.13□□□□□ -1.43
COL8A1-206ENST00000474648 RPL37AP61513 92 aaKnown RBP6.13□□□□□ -1.43
COL8A1-206ENST00000474648 KRTAP13-1Q8IUC0 172 aa6.13□□□□□ -1.43
COL8A1-206ENST00000474648 Q8N1X5 172 aa6.13□□□□□ -1.43
COL8A1-206ENST00000474648 SRRM2Q9UQ35 2752 aaKnown RBP6.13□□□□□ -1.43
COL8A1-206ENST00000474648 H7C2G1 150 aa6.12□□□□□ -1.43
COL8A1-206ENST00000474648 IGLV7-43P04211 117 aa6.12□□□□□ -1.43
COL8A1-206ENST00000474648 RPL28P46779 137 aaKnown RBP6.12□□□□□ -1.43
COL8A1-206ENST00000474648 SNHG12Q9BXW3 62 aa6.12□□□□□ -1.43
COL8A1-206ENST00000474648 CBY1Q9Y3M2 126 aa6.12□□□□□ -1.43
COL8A1-206ENST00000474648 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
COL8A1-206ENST00000474648 B5MCH6 92 aa6.11□□□□□ -1.43
COL8A1-206ENST00000474648 BATFQ16520 125 aa6.11□□□□□ -1.43
COL8A1-206ENST00000474648 C6orf99Q4VX62 202 aa6.11□□□□□ -1.43
COL8A1-206ENST00000474648 Q5VSD8 79 aa6.11□□□□□ -1.43
COL8A1-206ENST00000474648 ABCA13Q86UQ4 5058 aa6.1□□□□□ -1.43
COL8A1-206ENST00000474648 FAM19A1Q7Z5A9 133 aa6.1□□□□□ -1.43
COL8A1-206ENST00000474648 DIRC1Q969H9 104 aa6.1□□□□□ -1.43
COL8A1-206ENST00000474648 TRBV7-6A0A0J9YX20 115 aa6.09□□□□□ -1.43
COL8A1-206ENST00000474648 ETDCA0A1B0GVM5 59 aa6.09□□□□□ -1.43
COL8A1-206ENST00000474648 H0Y9J4 135 aa6.09□□□□□ -1.43
COL8A1-206ENST00000474648 ZNF861PO60384 105 aa6.09□□□□□ -1.43
COL8A1-206ENST00000474648 TSPAN13O95857 204 aa6.09□□□□□ -1.43
COL8A1-206ENST00000474648 PLA2G1BP04054 148 aaKnown RBP6.09□□□□□ -1.43
COL8A1-206ENST00000474648 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
COL8A1-206ENST00000474648 COX7BP24311 80 aa6.08□□□□□ -1.44
COL8A1-206ENST00000474648 UBE2AP49459 152 aa6.08□□□□□ -1.44
COL8A1-206ENST00000474648 ELOF1P60002 83 aaKnown RBP6.08□□□□□ -1.44
COL8A1-206ENST00000474648 PRLHP81277 87 aa6.08□□□□□ -1.44
COL8A1-206ENST00000474648 Q9BRP9 147 aa6.08□□□□□ -1.44
COL8A1-206ENST00000474648 KRTAP4-5Q9BYR2 181 aa6.08□□□□□ -1.44
COL8A1-206ENST00000474648 TRIAP1O43715 76 aa6.07□□□□□ -1.44
COL8A1-206ENST00000474648 Q1RN00 199 aa6.07□□□□□ -1.44
COL8A1-206ENST00000474648 Q6ZRX8 168 aa6.07□□□□□ -1.44
COL8A1-206ENST00000474648 SMCR5Q8TEV8 140 aa6.07□□□□□ -1.44
COL8A1-206ENST00000474648 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
COL8A1-206ENST00000474648 TAX1BP3O14907 124 aa6.06□□□□□ -1.44
COL8A1-206ENST00000474648 ERC2-IT1O76042 136 aa6.06□□□□□ -1.44
COL8A1-206ENST00000474648 INAFM2P0DMQ5 153 aa6.06□□□□□ -1.44
COL8A1-206ENST00000474648 VAMP3Q15836 100 aa6.05□□□□□ -1.44
COL8A1-206ENST00000474648 SPINK6Q6UWN8 80 aa6.05□□□□□ -1.44
COL8A1-206ENST00000474648 NAA38Q9BRA0 125 aaKnown RBP6.05□□□□□ -1.44
COL8A1-206ENST00000474648 H0YGX0 51 aa6.04□□□□□ -1.44
COL8A1-206ENST00000474648 LINC00575Q6W349 94 aa6.04□□□□□ -1.44
COL8A1-206ENST00000474648 HIGD2AQ9BW72 106 aa6.04□□□□□ -1.44
COL8A1-206ENST00000474648 C9orf118A6NHY6 69 aa6.03□□□□□ -1.44
COL8A1-206ENST00000474648 PSMB2P49721 201 aa6.03□□□□□ -1.44
COL8A1-206ENST00000474648 COL5A1-AS1Q5SY13 56 aa6.03□□□□□ -1.44
COL8A1-206ENST00000474648 FAM218AQ96MZ4 157 aa6.03□□□□□ -1.44
COL8A1-206ENST00000474648 CDIP1Q9H305 208 aa6.03□□□□□ -1.44
COL8A1-206ENST00000474648 DHRS4-AS1Q9P1J3 65 aa6.03□□□□□ -1.44
COL8A1-206ENST00000474648 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
COL8A1-206ENST00000474648 H3BUT2 72 aa6.01□□□□□ -1.45
COL8A1-206ENST00000474648 SCGB1C2P0DMR2 95 aa6.01□□□□□ -1.45
COL8A1-206ENST00000474648 ST20-AS1Q8NBB2 130 aa6.01□□□□□ -1.45
COL8A1-206ENST00000474648 CLEC2BQ92478 149 aa6.01□□□□□ -1.45
COL8A1-206ENST00000474648 LRP1Q07954 4544 aaKnown RBP6□□□□□ -1.45
COL8A1-206ENST00000474648 hADV29S1A0JD25 119 aa6□□□□□ -1.45
COL8A1-206ENST00000474648 COX6CP09669 75 aa6□□□□□ -1.45
COL8A1-206ENST00000474648 KRTAP1-4P0C5Y4 121 aa6□□□□□ -1.45
COL8A1-206ENST00000474648 SPRR4Q96PI1 79 aa5.99□□□□□ -1.45
COL8A1-206ENST00000474648 A0A1B0GX51 115 aa5.98□□□□□ -1.45
COL8A1-206ENST00000474648 A0A1W2PPM0 123 aa5.98□□□□□ -1.45
COL8A1-206ENST00000474648 SLC25A20O43772 301 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms