RNA–Protein interactions for RNA: ENST00000474391.1

COL4A1-203, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 2

Gene COL4A1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-203ENST00000474391 SPATA45Q537H7 98 aa6.13□□□□□ -1.43
COL4A1-203ENST00000474391 ADAMTSL4-AS1Q5T5F5 129 aa6.13□□□□□ -1.43
COL4A1-203ENST00000474391 MIEN1Q9BRT3 115 aa6.13□□□□□ -1.43
COL4A1-203ENST00000474391 SPANXB1Q9NS25 103 aaPredicted RBP6.13□□□□□ -1.43
COL4A1-203ENST00000474391 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
COL4A1-203ENST00000474391 IGLV6-57P01721 117 aa6.12□□□□□ -1.43
COL4A1-203ENST00000474391 DDTP30046 118 aa6.12□□□□□ -1.43
COL4A1-203ENST00000474391 PRR4Q16378 134 aa6.12□□□□□ -1.43
COL4A1-203ENST00000474391 SOSTDC1Q6X4U4 206 aa6.12□□□□□ -1.43
COL4A1-203ENST00000474391 ATOH7Q8N100 152 aa6.12□□□□□ -1.43
COL4A1-203ENST00000474391 LINC00304Q8N9R0 145 aa6.12□□□□□ -1.43
COL4A1-203ENST00000474391 SMCR5Q8TEV8 140 aa6.12□□□□□ -1.43
COL4A1-203ENST00000474391 PAM16Q9Y3D7 125 aa6.12□□□□□ -1.43
COL4A1-203ENST00000474391 ZNF706Q9Y5V0 76 aaPredicted RBP6.12□□□□□ -1.43
COL4A1-203ENST00000474391 ETDCA0A1B0GVM5 59 aa6.11□□□□□ -1.43
COL4A1-203ENST00000474391 B5MCH6 92 aa6.11□□□□□ -1.43
COL4A1-203ENST00000474391 ANKRD39Q53RE8 183 aa6.11□□□□□ -1.43
COL4A1-203ENST00000474391 C3orf22Q8N5N4 141 aa6.11□□□□□ -1.43
COL4A1-203ENST00000474391 LITAFQ99732 161 aa6.11□□□□□ -1.43
COL4A1-203ENST00000474391 TIMM17BO60830 172 aa6.1□□□□□ -1.43
COL4A1-203ENST00000474391 COX8AP10176 69 aa6.1□□□□□ -1.43
COL4A1-203ENST00000474391 LINC00483Q53H64 154 aa6.09□□□□□ -1.43
COL4A1-203ENST00000474391 Q6ZRX8 168 aa6.09□□□□□ -1.43
COL4A1-203ENST00000474391 UQCR10Q9UDW1 63 aa6.09□□□□□ -1.43
COL4A1-203ENST00000474391 NPC2P61916 151 aa6.08□□□□□ -1.44
COL4A1-203ENST00000474391 S100A7L2Q5SY68 101 aa6.08□□□□□ -1.44
COL4A1-203ENST00000474391 SLC25A34Q6PIV7 304 aa6.08□□□□□ -1.44
COL4A1-203ENST00000474391 LINC00308Q8TCZ7 52 aa6.08□□□□□ -1.44
COL4A1-203ENST00000474391 Q9BRP9 147 aa6.08□□□□□ -1.44
COL4A1-203ENST00000474391 SPANXCQ9NY87 97 aa6.08□□□□□ -1.44
COL4A1-203ENST00000474391 TRAV23DV6A0A075B6W5 121 aa6.07□□□□□ -1.44
COL4A1-203ENST00000474391 ZNF815PA8K554 130 aa6.07□□□□□ -1.44
COL4A1-203ENST00000474391 ERC2-IT1O76042 136 aa6.07□□□□□ -1.44
COL4A1-203ENST00000474391 SPAG11AQ6PDA7 123 aa6.07□□□□□ -1.44
COL4A1-203ENST00000474391 TTTY13Q9BZ97 58 aa6.07□□□□□ -1.44
COL4A1-203ENST00000474391 HIGD1BQ9P298 99 aa6.06□□□□□ -1.44
COL4A1-203ENST00000474391 ZNF73O43830 326 aaPredicted RBP6.05□□□□□ -1.44
COL4A1-203ENST00000474391 C14orf144Q96I85 54 aa6.05□□□□□ -1.44
COL4A1-203ENST00000474391 PRO1933Q9H354 126 aa6.05□□□□□ -1.44
COL4A1-203ENST00000474391 PPDPFQ9H3Y8 114 aa6.05□□□□□ -1.44
COL4A1-203ENST00000474391 GAGE2AQ6NT46 116 aa6.04□□□□□ -1.44
COL4A1-203ENST00000474391 PCP2Q8IVA1 136 aa6.04□□□□□ -1.44
COL4A1-203ENST00000474391 RETNLBQ9BQ08 111 aa6.04□□□□□ -1.44
COL4A1-203ENST00000474391 CBY1Q9Y3M2 126 aa6.04□□□□□ -1.44
COL4A1-203ENST00000474391 C2orf91Q6ZV80 131 aa6.03□□□□□ -1.44
COL4A1-203ENST00000474391 Q8NBF4 154 aa6.03□□□□□ -1.44
COL4A1-203ENST00000474391 SPANXDQ9BXN6 97 aa6.03□□□□□ -1.44
COL4A1-203ENST00000474391 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
COL4A1-203ENST00000474391 SPINK1P00995 79 aa6.01□□□□□ -1.45
COL4A1-203ENST00000474391 TAL2Q16559 108 aa6.01□□□□□ -1.45
COL4A1-203ENST00000474391 C4orf48Q5BLP8 95 aa6.01□□□□□ -1.45
COL4A1-203ENST00000474391 SSBP3-AS1Q7Z2R9 100 aa6.01□□□□□ -1.45
COL4A1-203ENST00000474391 OR13C6PQ8NH95 151 aa6.01□□□□□ -1.45
COL4A1-203ENST00000474391 MUC2Q02817 5179 aa6□□□□□ -1.45
COL4A1-203ENST00000474391 IGLV7-46A0A075B6I9 117 aa6□□□□□ -1.45
COL4A1-203ENST00000474391 IFITM1P13164 125 aa6□□□□□ -1.45
COL4A1-203ENST00000474391 HINT1P49773 126 aaPredicted RBP6□□□□□ -1.45
COL4A1-203ENST00000474391 SCGB1D4Q6XE38 83 aa6□□□□□ -1.45
COL4A1-203ENST00000474391 Q6ZVH6 145 aa6□□□□□ -1.45
COL4A1-203ENST00000474391 IGLV9-49A0A0B4J1Y8 123 aa5.99□□□□□ -1.45
COL4A1-203ENST00000474391 RPS29P62273 56 aaKnown RBP5.99□□□□□ -1.45
COL4A1-203ENST00000474391 MOBPQ13875 183 aa5.99□□□□□ -1.45
COL4A1-203ENST00000474391 COPS9Q8WXC6 57 aa5.99□□□□□ -1.45
COL4A1-203ENST00000474391 SPRR1BP22528 89 aa5.98□□□□□ -1.45
COL4A1-203ENST00000474391 ELOF1P60002 83 aaKnown RBP5.98□□□□□ -1.45
COL4A1-203ENST00000474391 HSD52Q0P140 79 aa5.98□□□□□ -1.45
COL4A1-203ENST00000474391 FP248Q71RG6 208 aaPredicted RBP5.98□□□□□ -1.45
COL4A1-203ENST00000474391 ST20-AS1Q8NBB2 130 aa5.98□□□□□ -1.45
COL4A1-203ENST00000474391 DHRS4-AS1Q9P1J3 65 aa5.98□□□□□ -1.45
COL4A1-203ENST00000474391 M0R143 59 aa5.97□□□□□ -1.45
COL4A1-203ENST00000474391 C6orf99Q4VX62 202 aa5.97□□□□□ -1.45
COL4A1-203ENST00000474391 TRBV7-6A0A0J9YX20 115 aa5.96□□□□□ -1.46
COL4A1-203ENST00000474391 COX7BP24311 80 aa5.96□□□□□ -1.46
COL4A1-203ENST00000474391 MUSTN1Q8IVN3 82 aa5.96□□□□□ -1.46
COL4A1-203ENST00000474391 Q8N377 158 aa5.95□□□□□ -1.46
COL4A1-203ENST00000474391 CDIP1Q9H305 208 aa5.95□□□□□ -1.46
COL4A1-203ENST00000474391 BVES-AS1Q5T3Y7 98 aa5.94□□□□□ -1.46
COL4A1-203ENST00000474391 CEND1Q8N111 149 aa5.94□□□□□ -1.46
COL4A1-203ENST00000474391 A6NDN8 102 aa5.93□□□□□ -1.46
COL4A1-203ENST00000474391 KRTAP13-3Q3SY46 172 aa5.93□□□□□ -1.46
COL4A1-203ENST00000474391 C9orf153Q5TBE3 101 aa5.93□□□□□ -1.46
COL4A1-203ENST00000474391 SNHG12Q9BXW3 62 aa5.93□□□□□ -1.46
COL4A1-203ENST00000474391 TMEM238LA0A1B0GVL6 79 aa5.92□□□□□ -1.46
COL4A1-203ENST00000474391 A0A1B0GWB2 263 aa5.92□□□□□ -1.46
COL4A1-203ENST00000474391 A6NJY4 79 aa5.92□□□□□ -1.46
COL4A1-203ENST00000474391 SLC25A20O43772 301 aa5.92□□□□□ -1.46
COL4A1-203ENST00000474391 HIST1H4GQ99525 98 aa5.92□□□□□ -1.46
COL4A1-203ENST00000474391 TRAV13-2A0A0B4J235 113 aa5.91□□□□□ -1.46
COL4A1-203ENST00000474391 A4D1N5 150 aa5.9□□□□□ -1.46
COL4A1-203ENST00000474391 LAMTOR3Q9UHA4 124 aa5.9□□□□□ -1.46
COL4A1-203ENST00000474391 IGLV5-48A0A075B6I7 105 aa5.89□□□□□ -1.47
COL4A1-203ENST00000474391 TEX49A0A1B0GTD5 131 aa5.89□□□□□ -1.47
COL4A1-203ENST00000474391 FXYD2P54710 66 aa5.89□□□□□ -1.47
COL4A1-203ENST00000474391 LINC01547P58512 204 aaPredicted RBP5.89□□□□□ -1.47
COL4A1-203ENST00000474391 SMIM29Q86T20 159 aa5.89□□□□□ -1.47
COL4A1-203ENST00000474391 SMIM11BQ8TCY0 68 aa5.89□□□□□ -1.47
COL4A1-203ENST00000474391 MUC17Q685J3 4493 aa5.88□□□□□ -1.47
COL4A1-203ENST00000474391 A0A0B4J2C4 111 aa5.88□□□□□ -1.47
COL4A1-203ENST00000474391 COL5A1-AS1Q5SY13 56 aa5.88□□□□□ -1.47
COL4A1-203ENST00000474391 A0A0U1RQV1 116 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms