RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 PNMA8CA0A1B0GUJ8 204 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 C9JAW5 83 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 ARPC5O15511 151 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 IFNGP01579 166 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 MT-ND4LP03901 98 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 TRAPPC2P0DI81 140 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 TRAPPC2BP0DI82 140 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 COX4I1P13073 169 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 CKS2P33552 79 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 KRTAP12-3P60328 96 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 NEDD8Q15843 81 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 GLIPR1L1Q6UWM5 242 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 OR10AG1Q8NH19 301 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 TSC22D3Q99576 134 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 CGREF1Q99674 301 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 SMIM7Q9BQ49 75 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 BANF2Q9H503 90 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 NIT2Q9NQR4 276 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 FKBP11Q9NYL4 201 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 BET1LQ9NYM9 111 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 HSPB8Q9UJY1 196 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 TNFSF18Q9UNG2 199 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 HIGD1AQ9Y241 93 aa0.97□□□□□ -2.25
CALD1-216ENST00000473714 TRAV23DV6A0A075B6W5 121 aa0.96□□□□□ -2.26
CALD1-216ENST00000473714 LOC105371267A0A1B0GV96 52 aa0.96□□□□□ -2.26
CALD1-216ENST00000473714 TRBV6-4A0A1B0GX49 114 aa0.96□□□□□ -2.26
CALD1-216ENST00000473714 UQCRQO14949 82 aa0.96□□□□□ -2.26
CALD1-216ENST00000473714 EDF1O60869 148 aaKnown RBP0.96□□□□□ -2.26
CALD1-216ENST00000473714 HBDP02042 147 aa0.96□□□□□ -2.26
CALD1-216ENST00000473714 RNASE3P12724 160 aaKnown RBP0.96□□□□□ -2.26
CALD1-216ENST00000473714 FOXA3P55318 350 aaPredicted RBP0.96□□□□□ -2.26
CALD1-216ENST00000473714 S100A12P80511 92 aa0.96□□□□□ -2.26
CALD1-216ENST00000473714 HIST1H1AQ02539 215 aaPredicted RBP0.96□□□□□ -2.26
CALD1-216ENST00000473714 CCDC58Q4VC31 144 aa0.96□□□□□ -2.26
CALD1-216ENST00000473714 TMEM244Q5VVB8 128 aa0.96□□□□□ -2.26
CALD1-216ENST00000473714 RPL13AP3Q6NVV1 102 aa0.96□□□□□ -2.26
CALD1-216ENST00000473714 LSM10Q969L4 123 aaKnown RBP0.96□□□□□ -2.26
CALD1-216ENST00000473714 PFDN5Q99471 154 aa0.96□□□□□ -2.26
CALD1-216ENST00000473714 SMIM3Q9BZL3 60 aa0.96□□□□□ -2.26
CALD1-216ENST00000473714 NDUFA4L2Q9NRX3 87 aa0.96□□□□□ -2.26
CALD1-216ENST00000473714 CCDC167Q9P0B6 97 aa0.96□□□□□ -2.26
CALD1-216ENST00000473714 TRAV12-3A0A0B4J271 114 aa0.95□□□□□ -2.26
CALD1-216ENST00000473714 PPYP01298 95 aa0.95□□□□□ -2.26
CALD1-216ENST00000473714 TCRAP04437 139 aa0.95□□□□□ -2.26
CALD1-216ENST00000473714 ZNF25P17030 456 aaPredicted RBP0.95□□□□□ -2.26
CALD1-216ENST00000473714 NCS1P62166 190 aa0.95□□□□□ -2.26
CALD1-216ENST00000473714 UNQ6190/PRO20217Q6UXQ8 127 aa0.95□□□□□ -2.26
CALD1-216ENST00000473714 C6orf201Q7Z4U5 140 aa0.95□□□□□ -2.26
CALD1-216ENST00000473714 OR8J3Q8NGG0 315 aa0.95□□□□□ -2.26
CALD1-216ENST00000473714 CIB3Q96Q77 187 aaPredicted RBP0.95□□□□□ -2.26
CALD1-216ENST00000473714 UBE2D4Q9Y2X8 147 aa0.95□□□□□ -2.26
CALD1-216ENST00000473714 A0A087WSZ3 146 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 IGHV1-24A0A0C4DH33 117 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 C20orf202A1L168 122 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 ZNF670-ZNF695F2Z2N8 137 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 K7ERU9 68 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 CCL25O15444 150 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 SLC25A4P12235 298 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 C9orf116Q5BN46 136 aaPredicted RBP0.94□□□□□ -2.26
CALD1-216ENST00000473714 SPAG11AQ6PDA7 123 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 CLPSL2Q6UWE3 100 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 KRTAP8-1Q8IUC2 63 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 C5orf17Q8NAS9 161 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 S100A13Q99584 98 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 CYSTM1Q9H1C7 97 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 ZFP30Q9Y2G7 519 aa0.94□□□□□ -2.26
CALD1-216ENST00000473714 FAM24AA6NFZ4 105 aa0.93□□□□□ -2.26
CALD1-216ENST00000473714 IFITM5A6NNB3 132 aa0.93□□□□□ -2.26
CALD1-216ENST00000473714 JMJD7-PLA2G4BH0Y9G9 81 aa0.93□□□□□ -2.26
CALD1-216ENST00000473714 NUPR1O60356 82 aa0.93□□□□□ -2.26
CALD1-216ENST00000473714 ANGP03950 147 aaKnown RBP0.93□□□□□ -2.26
CALD1-216ENST00000473714 HMGN1P05114 100 aa0.93□□□□□ -2.26
CALD1-216ENST00000473714 SLC25A5P05141 298 aaKnown RBP0.93□□□□□ -2.26
CALD1-216ENST00000473714 IGLC1P0CG04 106 aa0.93□□□□□ -2.26
CALD1-216ENST00000473714 LINC00694P0DN24 101 aa0.93□□□□□ -2.26
CALD1-216ENST00000473714 MIR22HGQ0VDD5 57 aa0.93□□□□□ -2.26
CALD1-216ENST00000473714 LINC00299Q6ZSB3 139 aa0.93□□□□□ -2.26
CALD1-216ENST00000473714 OBSCN-AS1Q96MR7 158 aa0.93□□□□□ -2.26
CALD1-216ENST00000473714 VPS25Q9BRG1 176 aa0.93□□□□□ -2.26
CALD1-216ENST00000473714 GNG8Q9UK08 70 aa0.93□□□□□ -2.26
CALD1-216ENST00000473714 A0A087WWC5 75 aa0.92□□□□□ -2.26
CALD1-216ENST00000473714 FXYD1O00168 92 aa0.92□□□□□ -2.26
CALD1-216ENST00000473714 INE1O15225 51 aa0.92□□□□□ -2.26
CALD1-216ENST00000473714 SMIM11AP58511 58 aa0.92□□□□□ -2.26
CALD1-216ENST00000473714 QRFPP83859 136 aa0.92□□□□□ -2.26
CALD1-216ENST00000473714 RHOHQ15669 191 aa0.92□□□□□ -2.26
CALD1-216ENST00000473714 SPATA45Q537H7 98 aa0.92□□□□□ -2.26
CALD1-216ENST00000473714 CLLU1Q5K131 121 aa0.92□□□□□ -2.26
CALD1-216ENST00000473714 LINC00526Q96FQ7 95 aa0.92□□□□□ -2.26
CALD1-216ENST00000473714 TAS2R8Q9NYW2 309 aa0.92□□□□□ -2.26
CALD1-216ENST00000473714 COMMD3Q9UBI1 195 aa0.92□□□□□ -2.26
CALD1-216ENST00000473714 NDUFA12Q9UI09 145 aa0.92□□□□□ -2.26
CALD1-216ENST00000473714 PAIP2BQ9ULR5 123 aaKnown RBP0.92□□□□□ -2.26
CALD1-216ENST00000473714 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.91□□□□□ -2.26
CALD1-216ENST00000473714 TRAV30A0A087WSZ9 112 aa0.91□□□□□ -2.26
CALD1-216ENST00000473714 LOC110117498A0A087WWA1 95 aa0.91□□□□□ -2.26
CALD1-216ENST00000473714 C9orf92A6NGG3 77 aa0.91□□□□□ -2.26
CALD1-216ENST00000473714 TMEM262E9PQX1 116 aa0.91□□□□□ -2.26
CALD1-216ENST00000473714 NCR3O14931 201 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms