RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 FAM229BQ4G0N7 80 aa7.67□□□□□ -1.18
SHROOM3-204ENST00000473602 A0A087X002 238 aa7.66□□□□□ -1.18
SHROOM3-204ENST00000473602 NDUFC2O95298 119 aa7.66□□□□□ -1.18
SHROOM3-204ENST00000473602 C3orf79P0CE67 100 aa7.66□□□□□ -1.18
SHROOM3-204ENST00000473602 SPRR1AP35321 89 aa7.66□□□□□ -1.18
SHROOM3-204ENST00000473602 KRTDAPP60985 99 aa7.66□□□□□ -1.18
SHROOM3-204ENST00000473602 LINC00337Q8N6G1 96 aa7.66□□□□□ -1.18
SHROOM3-204ENST00000473602 DAND5Q8N907 189 aa7.66□□□□□ -1.18
SHROOM3-204ENST00000473602 PRO1933Q9H354 126 aa7.66□□□□□ -1.18
SHROOM3-204ENST00000473602 KCNQ1DNQ9H478 68 aa7.66□□□□□ -1.18
SHROOM3-204ENST00000473602 FAT4Q6V0I7 4981 aa7.66□□□□□ -1.18
SHROOM3-204ENST00000473602 A0A0J9YXY3 114 aa7.65□□□□□ -1.18
SHROOM3-204ENST00000473602 SPANXB1Q9NS25 103 aaPredicted RBP7.65□□□□□ -1.18
SHROOM3-204ENST00000473602 TRBV10-3A0A0K0K1G6 114 aa7.64□□□□□ -1.19
SHROOM3-204ENST00000473602 COL5A1-AS1Q5SY13 56 aa7.64□□□□□ -1.19
SHROOM3-204ENST00000473602 TYMSOSQ8TAI1 123 aa7.64□□□□□ -1.19
SHROOM3-204ENST00000473602 A0A0U1RQV1 116 aa7.63□□□□□ -1.19
SHROOM3-204ENST00000473602 TIMM17BO60830 172 aa7.63□□□□□ -1.19
SHROOM3-204ENST00000473602 HIGD2AQ9BW72 106 aa7.63□□□□□ -1.19
SHROOM3-204ENST00000473602 KRTAP9-6A0A140TA67 174 aa7.62□□□□□ -1.19
SHROOM3-204ENST00000473602 ETDCA0A1B0GVM5 59 aa7.62□□□□□ -1.19
SHROOM3-204ENST00000473602 KRTAP4-16G5E9R7 235 aaPredicted RBP7.62□□□□□ -1.19
SHROOM3-204ENST00000473602 ZNF706Q9Y5V0 76 aaPredicted RBP7.62□□□□□ -1.19
SHROOM3-204ENST00000473602 PRR4Q16378 134 aa7.61□□□□□ -1.19
SHROOM3-204ENST00000473602 KRTAP13-2Q52LG2 175 aa7.61□□□□□ -1.19
SHROOM3-204ENST00000473602 SPATA45Q537H7 98 aa7.61□□□□□ -1.19
SHROOM3-204ENST00000473602 ADAMTSL4-AS1Q5T5F5 129 aa7.61□□□□□ -1.19
SHROOM3-204ENST00000473602 ANAPC11Q9NYG5 84 aa7.61□□□□□ -1.19
SHROOM3-204ENST00000473602 ZNF815PA8K554 130 aa7.6□□□□□ -1.19
SHROOM3-204ENST00000473602 S100A7L2Q5SY68 101 aa7.6□□□□□ -1.19
SHROOM3-204ENST00000473602 SOSTDC1Q6X4U4 206 aa7.6□□□□□ -1.19
SHROOM3-204ENST00000473602 PAM16Q9Y3D7 125 aa7.6□□□□□ -1.19
SHROOM3-204ENST00000473602 IGLV6-57P01721 117 aa7.59□□□□□ -1.19
SHROOM3-204ENST00000473602 SPRR4Q96PI1 79 aa7.59□□□□□ -1.19
SHROOM3-204ENST00000473602 LITAFQ99732 161 aa7.59□□□□□ -1.19
SHROOM3-204ENST00000473602 CBY1Q9Y3M2 126 aa7.59□□□□□ -1.19
SHROOM3-204ENST00000473602 NPC2P61916 151 aa7.58□□□□□ -1.2
SHROOM3-204ENST00000473602 SPANXCQ9NY87 97 aa7.58□□□□□ -1.2
SHROOM3-204ENST00000473602 B5MCH6 92 aa7.57□□□□□ -1.2
SHROOM3-204ENST00000473602 EIF4EBP3O60516 100 aaPredicted RBP7.57□□□□□ -1.2
SHROOM3-204ENST00000473602 LINC00304Q8N9R0 145 aa7.57□□□□□ -1.2
SHROOM3-204ENST00000473602 LINC00308Q8TCZ7 52 aa7.57□□□□□ -1.2
SHROOM3-204ENST00000473602 SNHG12Q9BXW3 62 aa7.57□□□□□ -1.2
SHROOM3-204ENST00000473602 TRAV23DV6A0A075B6W5 121 aa7.56□□□□□ -1.2
SHROOM3-204ENST00000473602 Q6ZRX8 168 aa7.56□□□□□ -1.2
SHROOM3-204ENST00000473602 SMCR5Q8TEV8 140 aa7.56□□□□□ -1.2
SHROOM3-204ENST00000473602 TTTY13Q9BZ97 58 aa7.56□□□□□ -1.2
SHROOM3-204ENST00000473602 A0A1B0GV90 55 aa7.55□□□□□ -1.2
SHROOM3-204ENST00000473602 TSPAN13O95857 204 aa7.55□□□□□ -1.2
SHROOM3-204ENST00000473602 SLC25A34Q6PIV7 304 aa7.55□□□□□ -1.2
SHROOM3-204ENST00000473602 ZNF73O43830 326 aaPredicted RBP7.54□□□□□ -1.2
SHROOM3-204ENST00000473602 ANKRD39Q53RE8 183 aa7.54□□□□□ -1.2
SHROOM3-204ENST00000473602 XP32Q5T750 250 aa7.54□□□□□ -1.2
SHROOM3-204ENST00000473602 SCGB1D4Q6XE38 83 aa7.54□□□□□ -1.2
SHROOM3-204ENST00000473602 COPS9Q8WXC6 57 aa7.54□□□□□ -1.2
SHROOM3-204ENST00000473602 SPANXDQ9BXN6 97 aa7.54□□□□□ -1.2
SHROOM3-204ENST00000473602 LINC00483Q53H64 154 aa7.53□□□□□ -1.2
SHROOM3-204ENST00000473602 ATOH7Q8N100 152 aa7.53□□□□□ -1.2
SHROOM3-204ENST00000473602 C3orf22Q8N5N4 141 aa7.53□□□□□ -1.2
SHROOM3-204ENST00000473602 PPDPFQ9H3Y8 114 aa7.53□□□□□ -1.2
SHROOM3-204ENST00000473602 DLEU1O43261 78 aa7.52□□□□□ -1.21
SHROOM3-204ENST00000473602 HINT1P49773 126 aaPredicted RBP7.52□□□□□ -1.21
SHROOM3-204ENST00000473602 Q6ZVH6 145 aa7.52□□□□□ -1.21
SHROOM3-204ENST00000473602 Q9BRP9 147 aa7.52□□□□□ -1.21
SHROOM3-204ENST00000473602 IFITM1P13164 125 aa7.51□□□□□ -1.21
SHROOM3-204ENST00000473602 SPAG11AQ6PDA7 123 aa7.51□□□□□ -1.21
SHROOM3-204ENST00000473602 OR13C6PQ8NH95 151 aa7.5□□□□□ -1.21
SHROOM3-204ENST00000473602 ERC2-IT1O76042 136 aa7.49□□□□□ -1.21
SHROOM3-204ENST00000473602 GAGE2AQ6NT46 116 aa7.49□□□□□ -1.21
SHROOM3-204ENST00000473602 A6NDN8 102 aa7.48□□□□□ -1.21
SHROOM3-204ENST00000473602 COX8AP10176 69 aa7.48□□□□□ -1.21
SHROOM3-204ENST00000473602 PCP2Q8IVA1 136 aa7.48□□□□□ -1.21
SHROOM3-204ENST00000473602 MUC17Q685J3 4493 aa7.47□□□□□ -1.21
SHROOM3-204ENST00000473602 BATFQ16520 125 aa7.46□□□□□ -1.22
SHROOM3-204ENST00000473602 Q8NBF4 154 aa7.46□□□□□ -1.22
SHROOM3-204ENST00000473602 KRTAP4-8Q9BYQ9 185 aa7.45□□□□□ -1.22
SHROOM3-204ENST00000473602 DHRS4-AS1Q9P1J3 65 aa7.45□□□□□ -1.22
SHROOM3-204ENST00000473602 FSIP2Q5CZC0 6907 aa7.44□□□□□ -1.22
SHROOM3-204ENST00000473602 SPINK1P00995 79 aa7.44□□□□□ -1.22
SHROOM3-204ENST00000473602 SSBP3-AS1Q7Z2R9 100 aa7.44□□□□□ -1.22
SHROOM3-204ENST00000473602 MUSTN1Q8IVN3 82 aa7.44□□□□□ -1.22
SHROOM3-204ENST00000473602 TRBV7-6A0A0J9YX20 115 aa7.43□□□□□ -1.22
SHROOM3-204ENST00000473602 COX7BP24311 80 aa7.43□□□□□ -1.22
SHROOM3-204ENST00000473602 ELOF1P60002 83 aaKnown RBP7.43□□□□□ -1.22
SHROOM3-204ENST00000473602 UBE2V1Q13404 147 aa7.43□□□□□ -1.22
SHROOM3-204ENST00000473602 MOBPQ13875 183 aa7.43□□□□□ -1.22
SHROOM3-204ENST00000473602 C6orf99Q4VX62 202 aa7.43□□□□□ -1.22
SHROOM3-204ENST00000473602 RETNLBQ9BQ08 111 aa7.43□□□□□ -1.22
SHROOM3-204ENST00000473602 HIGD1BQ9P298 99 aa7.43□□□□□ -1.22
SHROOM3-204ENST00000473602 IGLV9-49A0A0B4J1Y8 123 aa7.42□□□□□ -1.22
SHROOM3-204ENST00000473602 HSD52Q0P140 79 aa7.42□□□□□ -1.22
SHROOM3-204ENST00000473602 TAL2Q16559 108 aa7.42□□□□□ -1.22
SHROOM3-204ENST00000473602 GTF2H5Q6ZYL4 71 aa7.42□□□□□ -1.22
SHROOM3-204ENST00000473602 TRAV13-2A0A0B4J235 113 aa7.41□□□□□ -1.22
SHROOM3-204ENST00000473602 SPRR1BP22528 89 aa7.41□□□□□ -1.22
SHROOM3-204ENST00000473602 RPS29P62273 56 aaKnown RBP7.41□□□□□ -1.22
SHROOM3-204ENST00000473602 A0A1B0GWB2 263 aa7.4□□□□□ -1.22
SHROOM3-204ENST00000473602 TPRXLQ17RH7 258 aa7.4□□□□□ -1.22
SHROOM3-204ENST00000473602 ST20-AS1Q8NBB2 130 aa7.4□□□□□ -1.22
SHROOM3-204ENST00000473602 IGLV7-46A0A075B6I9 117 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms