RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 TRAV23DV6A0A075B6W5 121 aa6.77□□□□□ -1.33
CPNE1-222ENST00000473373 LOC107984156A0A0G2JMH3 177 aa6.77□□□□□ -1.33
CPNE1-222ENST00000473373 JOSD1Q15040 202 aaPredicted RBP6.77□□□□□ -1.33
CPNE1-222ENST00000473373 KRTAP13-2Q52LG2 175 aa6.77□□□□□ -1.33
CPNE1-222ENST00000473373 ARL17AQ8IVW1 177 aa6.77□□□□□ -1.33
CPNE1-222ENST00000473373 SPRR4Q96PI1 79 aa6.77□□□□□ -1.33
CPNE1-222ENST00000473373 S100A1P23297 94 aa6.76□□□□□ -1.33
CPNE1-222ENST00000473373 ADAMTSL4-AS1Q5T5F5 129 aa6.76□□□□□ -1.33
CPNE1-222ENST00000473373 GAGE2AQ6NT46 116 aa6.76□□□□□ -1.33
CPNE1-222ENST00000473373 ATOH7Q8N100 152 aa6.76□□□□□ -1.33
CPNE1-222ENST00000473373 C3orf22Q8N5N4 141 aa6.76□□□□□ -1.33
CPNE1-222ENST00000473373 LPAP08519 4548 aa6.76□□□□□ -1.33
CPNE1-222ENST00000473373 TIMM17BO60830 172 aa6.75□□□□□ -1.33
CPNE1-222ENST00000473373 S100A6P06703 90 aa6.75□□□□□ -1.33
CPNE1-222ENST00000473373 SPRR1AP35321 89 aa6.75□□□□□ -1.33
CPNE1-222ENST00000473373 AKR1D1P51857 326 aa6.75□□□□□ -1.33
CPNE1-222ENST00000473373 COA6Q5JTJ3 125 aaKnown RBP6.75□□□□□ -1.33
CPNE1-222ENST00000473373 LINC00308Q8TCZ7 52 aa6.75□□□□□ -1.33
CPNE1-222ENST00000473373 SPANXCQ9NY87 97 aa6.75□□□□□ -1.33
CPNE1-222ENST00000473373 B5MCH6 92 aa6.74□□□□□ -1.33
CPNE1-222ENST00000473373 SOSTDC1Q6X4U4 206 aa6.74□□□□□ -1.33
CPNE1-222ENST00000473373 COPS9Q8WXC6 57 aa6.74□□□□□ -1.33
CPNE1-222ENST00000473373 RETNLBQ9BQ08 111 aa6.74□□□□□ -1.33
CPNE1-222ENST00000473373 TTTY13Q9BZ97 58 aa6.74□□□□□ -1.33
CPNE1-222ENST00000473373 IGLV9-49A0A0B4J1Y8 123 aa6.73□□□□□ -1.33
CPNE1-222ENST00000473373 HSBP1L1C9JCN9 74 aa6.73□□□□□ -1.33
CPNE1-222ENST00000473373 ZNF73O43830 326 aaPredicted RBP6.73□□□□□ -1.33
CPNE1-222ENST00000473373 Q6ZRX8 168 aa6.73□□□□□ -1.33
CPNE1-222ENST00000473373 IGLV6-57P01721 117 aa6.72□□□□□ -1.33
CPNE1-222ENST00000473373 KRTAP4-16G5E9R7 235 aaPredicted RBP6.71□□□□□ -1.34
CPNE1-222ENST00000473373 C9orf153Q5TBE3 101 aa6.71□□□□□ -1.34
CPNE1-222ENST00000473373 SPAG11AQ6PDA7 123 aa6.71□□□□□ -1.34
CPNE1-222ENST00000473373 LINC00518Q8N0U6 118 aa6.71□□□□□ -1.34
CPNE1-222ENST00000473373 MOBPQ13875 183 aa6.7□□□□□ -1.34
CPNE1-222ENST00000473373 ANKRD39Q53RE8 183 aa6.7□□□□□ -1.34
CPNE1-222ENST00000473373 Q8NBF4 154 aa6.7□□□□□ -1.34
CPNE1-222ENST00000473373 LITAFQ99732 161 aa6.7□□□□□ -1.34
CPNE1-222ENST00000473373 SPANXDQ9BXN6 97 aa6.7□□□□□ -1.34
CPNE1-222ENST00000473373 MUC2Q02817 5179 aa6.69□□□□□ -1.34
CPNE1-222ENST00000473373 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
CPNE1-222ENST00000473373 Q9BRP9 147 aa6.69□□□□□ -1.34
CPNE1-222ENST00000473373 A6NDN8 102 aa6.68□□□□□ -1.34
CPNE1-222ENST00000473373 SNRPEP62304 92 aaKnown RBP6.68□□□□□ -1.34
CPNE1-222ENST00000473373 IFITM1P13164 125 aa6.67□□□□□ -1.34
CPNE1-222ENST00000473373 HIST3H2BBQ8N257 126 aa6.67□□□□□ -1.34
CPNE1-222ENST00000473373 KRTAP9-2Q9BYQ4 174 aa6.67□□□□□ -1.34
CPNE1-222ENST00000473373 IGLV7-46A0A075B6I9 117 aa6.66□□□□□ -1.34
CPNE1-222ENST00000473373 COX7BP24311 80 aa6.66□□□□□ -1.34
CPNE1-222ENST00000473373 CTAG1AP78358 180 aa6.66□□□□□ -1.34
CPNE1-222ENST00000473373 LINC00483Q53H64 154 aa6.66□□□□□ -1.34
CPNE1-222ENST00000473373 Q6ZVH6 145 aa6.66□□□□□ -1.34
CPNE1-222ENST00000473373 PCP2Q8IVA1 136 aa6.66□□□□□ -1.34
CPNE1-222ENST00000473373 HIST1H2BLQ99880 126 aa6.66□□□□□ -1.34
CPNE1-222ENST00000473373 CDIP1Q9H305 208 aa6.66□□□□□ -1.34
CPNE1-222ENST00000473373 DHRS4-AS1Q9P1J3 65 aa6.66□□□□□ -1.34
CPNE1-222ENST00000473373 SCGB1D1O95968 90 aa6.65□□□□□ -1.34
CPNE1-222ENST00000473373 C6orf99Q4VX62 202 aa6.65□□□□□ -1.34
CPNE1-222ENST00000473373 SLC25A34Q6PIV7 304 aa6.65□□□□□ -1.34
CPNE1-222ENST00000473373 SPINK1P00995 79 aa6.64□□□□□ -1.35
CPNE1-222ENST00000473373 TAL2Q16559 108 aa6.64□□□□□ -1.35
CPNE1-222ENST00000473373 MUSTN1Q8IVN3 82 aa6.64□□□□□ -1.35
CPNE1-222ENST00000473373 ST20-AS1Q8NBB2 130 aa6.64□□□□□ -1.35
CPNE1-222ENST00000473373 SSBP3-AS1Q7Z2R9 100 aa6.63□□□□□ -1.35
CPNE1-222ENST00000473373 DEFB105AQ8NG35 78 aa6.63□□□□□ -1.35
CPNE1-222ENST00000473373 TRAV13-2A0A0B4J235 113 aa6.62□□□□□ -1.35
CPNE1-222ENST00000473373 LAMTOR3Q9UHA4 124 aa6.62□□□□□ -1.35
CPNE1-222ENST00000473373 C5orf52A6NGY3 159 aa6.61□□□□□ -1.35
CPNE1-222ENST00000473373 ELOF1P60002 83 aaKnown RBP6.61□□□□□ -1.35
CPNE1-222ENST00000473373 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
CPNE1-222ENST00000473373 A0A1B0GWB2 263 aa6.6□□□□□ -1.35
CPNE1-222ENST00000473373 FP248Q71RG6 208 aaPredicted RBP6.59□□□□□ -1.35
CPNE1-222ENST00000473373 NHP2Q9NX24 153 aaKnown RBP6.59□□□□□ -1.35
CPNE1-222ENST00000473373 SLC25A20O43772 301 aa6.58□□□□□ -1.36
CPNE1-222ENST00000473373 VAMP3Q15836 100 aa6.58□□□□□ -1.36
CPNE1-222ENST00000473373 TPRXLQ17RH7 258 aa6.58□□□□□ -1.36
CPNE1-222ENST00000473373 Q1RN00 199 aa6.58□□□□□ -1.36
CPNE1-222ENST00000473373 HRCT1Q6UXD1 115 aa6.58□□□□□ -1.36
CPNE1-222ENST00000473373 HIST1H4GQ99525 98 aa6.58□□□□□ -1.36
CPNE1-222ENST00000473373 TRBV7-6A0A0J9YX20 115 aa6.57□□□□□ -1.36
CPNE1-222ENST00000473373 A0A0U1RQV1 116 aa6.57□□□□□ -1.36
CPNE1-222ENST00000473373 TEX49A0A1B0GTD5 131 aa6.56□□□□□ -1.36
CPNE1-222ENST00000473373 A4D1N5 150 aa6.56□□□□□ -1.36
CPNE1-222ENST00000473373 SMIM11BQ8TCY0 68 aa6.56□□□□□ -1.36
CPNE1-222ENST00000473373 RPS29P62273 56 aaKnown RBP6.55□□□□□ -1.36
CPNE1-222ENST00000473373 LIMD2Q9BT23 127 aa6.55□□□□□ -1.36
CPNE1-222ENST00000473373 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
CPNE1-222ENST00000473373 C12orf57Q99622 126 aa6.54□□□□□ -1.36
CPNE1-222ENST00000473373 F8WEM9 126 aa6.53□□□□□ -1.36
CPNE1-222ENST00000473373 SPRR1BP22528 89 aa6.53□□□□□ -1.36
CPNE1-222ENST00000473373 Q8N377 158 aa6.53□□□□□ -1.36
CPNE1-222ENST00000473373 PRO1933Q9H354 126 aa6.53□□□□□ -1.36
CPNE1-222ENST00000473373 PAM16Q9Y3D7 125 aa6.53□□□□□ -1.36
CPNE1-222ENST00000473373 COX8AP10176 69 aa6.52□□□□□ -1.37
CPNE1-222ENST00000473373 SPATA45Q537H7 98 aa6.52□□□□□ -1.37
CPNE1-222ENST00000473373 VAMP8Q9BV40 100 aa6.52□□□□□ -1.37
CPNE1-222ENST00000473373 H7C2G1 150 aa6.51□□□□□ -1.37
CPNE1-222ENST00000473373 C14orf144Q96I85 54 aa6.51□□□□□ -1.37
CPNE1-222ENST00000473373 RAB37Q96AX2 223 aa6.5□□□□□ -1.37
CPNE1-222ENST00000473373 hADV29S1A0JD25 119 aa6.49□□□□□ -1.37
CPNE1-222ENST00000473373 SNCGO76070 127 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms