RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 RPL37AP61513 92 aaKnown RBP4.52□□□□□ -1.69
CKS1B-205ENST00000473344 C14orf177Q52M58 125 aa4.52□□□□□ -1.69
CKS1B-205ENST00000473344 C2orf48Q96LS8 159 aa4.52□□□□□ -1.69
CKS1B-205ENST00000473344 C9orf85Q96MD7 179 aa4.52□□□□□ -1.69
CKS1B-205ENST00000473344 JPT2Q9H910 190 aa4.52□□□□□ -1.69
CKS1B-205ENST00000473344 KLK12Q9UKR0 248 aa4.52□□□□□ -1.69
CKS1B-205ENST00000473344 PYGO1Q9Y3Y4 419 aa4.52□□□□□ -1.69
CKS1B-205ENST00000473344 V9GYY9 64 aa4.52□□□□□ -1.69
CKS1B-205ENST00000473344 IGHV1-58A0A0C4DH39 117 aa4.51□□□□□ -1.69
CKS1B-205ENST00000473344 TRBV27A0A0K0K1C4 114 aa4.51□□□□□ -1.69
CKS1B-205ENST00000473344 RNASE3P12724 160 aaKnown RBP4.51□□□□□ -1.69
CKS1B-205ENST00000473344 POLR2KP53803 58 aaKnown RBP4.51□□□□□ -1.69
CKS1B-205ENST00000473344 KRTAP10-4P60372 401 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-205ENST00000473344 AMELXQ99217 191 aa4.51□□□□□ -1.69
CKS1B-205ENST00000473344 C1orf43Q9BWL3 253 aa4.51□□□□□ -1.69
CKS1B-205ENST00000473344 C11orf21Q9P2W6 132 aa4.51□□□□□ -1.69
CKS1B-205ENST00000473344 PKHD1L1Q86WI1 4243 aa4.51□□□□□ -1.69
CKS1B-205ENST00000473344 TRAV13-2A0A0B4J235 113 aa4.5□□□□□ -1.69
CKS1B-205ENST00000473344 FAM236DA0A1B0GTK5 79 aa4.5□□□□□ -1.69
CKS1B-205ENST00000473344 H0YGX0 51 aa4.5□□□□□ -1.69
CKS1B-205ENST00000473344 I3L3M4 83 aa4.5□□□□□ -1.69
CKS1B-205ENST00000473344 CRPP02741 224 aa4.5□□□□□ -1.69
CKS1B-205ENST00000473344 BAALC-AS2P0C853 105 aa4.5□□□□□ -1.69
CKS1B-205ENST00000473344 FAM236CP0DP71 79 aa4.5□□□□□ -1.69
CKS1B-205ENST00000473344 PIK3CD-AS1Q5SR53 167 aa4.5□□□□□ -1.69
CKS1B-205ENST00000473344 FAM74A4Q5TZK3 123 aa4.5□□□□□ -1.69
CKS1B-205ENST00000473344 C14orf178Q8N769 122 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-205ENST00000473344 CHCHD7Q9BUK0 85 aa4.5□□□□□ -1.69
CKS1B-205ENST00000473344 NDUFA12Q9UI09 145 aa4.5□□□□□ -1.69
CKS1B-205ENST00000473344 TRAV26-2A0A0B4J265 109 aa4.49□□□□□ -1.69
CKS1B-205ENST00000473344 TINCRA0A1B0GVN0 87 aa4.49□□□□□ -1.69
CKS1B-205ENST00000473344 PFN2P35080 140 aa4.49□□□□□ -1.69
CKS1B-205ENST00000473344 Q9UF83 564 aa4.49□□□□□ -1.69
CKS1B-205ENST00000473344 H3BQ85 93 aa4.48□□□□□ -1.69
CKS1B-205ENST00000473344 GAS8-AS1O95177 125 aa4.48□□□□□ -1.69
CKS1B-205ENST00000473344 RPL36AP83881 106 aaKnown RBP4.48□□□□□ -1.69
CKS1B-205ENST00000473344 HRCT1Q6UXD1 115 aa4.48□□□□□ -1.69
CKS1B-205ENST00000473344 RPL36ALQ969Q0 106 aaKnown RBP4.48□□□□□ -1.69
CKS1B-205ENST00000473344 KRTAP3-1Q9BYR8 98 aa4.48□□□□□ -1.69
CKS1B-205ENST00000473344 LRP2P98164 4655 aa4.47□□□□□ -1.69
CKS1B-205ENST00000473344 A0A087WWL8 130 aa4.47□□□□□ -1.69
CKS1B-205ENST00000473344 TRBV10-1A0A0K0K1A3 114 aa4.47□□□□□ -1.69
CKS1B-205ENST00000473344 USP17L23D6RBM5 183 aa4.47□□□□□ -1.69
CKS1B-205ENST00000473344 F5H697 171 aa4.47□□□□□ -1.69
CKS1B-205ENST00000473344 JMJD7-PLA2G4BH0Y9G9 81 aa4.47□□□□□ -1.69
CKS1B-205ENST00000473344 NDUFA1O15239 70 aa4.47□□□□□ -1.69
CKS1B-205ENST00000473344 TSHBP01222 138 aa4.47□□□□□ -1.69
CKS1B-205ENST00000473344 ANGP03950 147 aaKnown RBP4.47□□□□□ -1.69
CKS1B-205ENST00000473344 TSPEAR-AS2P59090 65 aa4.47□□□□□ -1.69
CKS1B-205ENST00000473344 DGAT2L7PQ6IED9 249 aa4.47□□□□□ -1.69
CKS1B-205ENST00000473344 C20orf203Q8NBC4 194 aa4.47□□□□□ -1.69
CKS1B-205ENST00000473344 RPL39LQ96EH5 51 aaKnown RBP4.47□□□□□ -1.69
CKS1B-205ENST00000473344 TMEM243Q9BU79 118 aa4.47□□□□□ -1.69
CKS1B-205ENST00000473344 TRBV6-8A0A0A6YYG3 113 aa4.46□□□□□ -1.7
CKS1B-205ENST00000473344 SEC61GP60059 68 aa4.46□□□□□ -1.7
CKS1B-205ENST00000473344 Q5XG85 94 aa4.46□□□□□ -1.7
CKS1B-205ENST00000473344 ENHOQ6UWT2 76 aa4.46□□□□□ -1.7
CKS1B-205ENST00000473344 Q6ZRU5 148 aa4.46□□□□□ -1.7
CKS1B-205ENST00000473344 CLEC2BQ92478 149 aa4.46□□□□□ -1.7
CKS1B-205ENST00000473344 TRAV7A0A075B6U4 112 aa4.45□□□□□ -1.7
CKS1B-205ENST00000473344 C4orf26Q17RF5 130 aa4.45□□□□□ -1.7
CKS1B-205ENST00000473344 C1orf195Q5TG92 126 aa4.45□□□□□ -1.7
CKS1B-205ENST00000473344 SUMO4Q6EEV6 95 aa4.45□□□□□ -1.7
CKS1B-205ENST00000473344 C9orf163Q8N9P6 203 aa4.45□□□□□ -1.7
CKS1B-205ENST00000473344 LITAFQ99732 161 aa4.45□□□□□ -1.7
CKS1B-205ENST00000473344 IGLV4-3A0A075B6K6 122 aa4.44□□□□□ -1.7
CKS1B-205ENST00000473344 RPL28P46779 137 aaKnown RBP4.44□□□□□ -1.7
CKS1B-205ENST00000473344 SMCR5Q8TEV8 140 aa4.44□□□□□ -1.7
CKS1B-205ENST00000473344 DSCR8Q96T75 97 aa4.44□□□□□ -1.7
CKS1B-205ENST00000473344 UBL5Q9BZL1 73 aa4.44□□□□□ -1.7
CKS1B-205ENST00000473344 KIF25-AS1Q9Y6Z4 181 aa4.44□□□□□ -1.7
CKS1B-205ENST00000473344 TNXBP22105 4242 aa4.44□□□□□ -1.7
CKS1B-205ENST00000473344 MT1HL1P0DM35 61 aa4.43□□□□□ -1.7
CKS1B-205ENST00000473344 CLPSL2Q6UWE3 100 aa4.43□□□□□ -1.7
CKS1B-205ENST00000473344 LINC00269Q8N2A0 174 aa4.43□□□□□ -1.7
CKS1B-205ENST00000473344 LINC00308Q8TCZ7 52 aa4.43□□□□□ -1.7
CKS1B-205ENST00000473344 UBE2D4Q9Y2X8 147 aa4.43□□□□□ -1.7
CKS1B-205ENST00000473344 IGHV3-64A0A075B6Q5 118 aa4.42□□□□□ -1.7
CKS1B-205ENST00000473344 A0A0J9YXV3 536 aa4.42□□□□□ -1.7
CKS1B-205ENST00000473344 PANO1I0J062 215 aa4.42□□□□□ -1.7
CKS1B-205ENST00000473344 PDE6GP18545 87 aa4.42□□□□□ -1.7
CKS1B-205ENST00000473344 RPL39P62891 51 aaKnown RBP4.42□□□□□ -1.7
CKS1B-205ENST00000473344 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
CKS1B-205ENST00000473344 OBSCN-AS1Q96MR7 158 aa4.42□□□□□ -1.7
CKS1B-205ENST00000473344 IGLV10-54A0A075B6I4 117 aa4.41□□□□□ -1.7
CKS1B-205ENST00000473344 IGLV5-45A0A087WSX0 123 aa4.41□□□□□ -1.7
CKS1B-205ENST00000473344 CCKP06307 115 aa4.41□□□□□ -1.7
CKS1B-205ENST00000473344 XCL1P47992 114 aa4.41□□□□□ -1.7
CKS1B-205ENST00000473344 CNBPP62633 177 aaKnown RBP4.41□□□□□ -1.7
CKS1B-205ENST00000473344 KLKP1Q107X0 134 aa4.41□□□□□ -1.7
CKS1B-205ENST00000473344 C6orf226Q5I0X4 101 aa4.41□□□□□ -1.7
CKS1B-205ENST00000473344 PRR34Q9NV39 138 aa4.41□□□□□ -1.7
CKS1B-205ENST00000473344 A0A087WYN8 130 aa4.4□□□□□ -1.71
CKS1B-205ENST00000473344 M0QY20 66 aa4.4□□□□□ -1.71
CKS1B-205ENST00000473344 ERC2-IT1O76042 136 aa4.4□□□□□ -1.71
CKS1B-205ENST00000473344 REG3AQ06141 175 aa4.4□□□□□ -1.71
CKS1B-205ENST00000473344 ORMDL1Q9P0S3 153 aa4.4□□□□□ -1.71
CKS1B-205ENST00000473344 IGKV3D-7A0A0C4DH55 119 aa4.39□□□□□ -1.71
CKS1B-205ENST00000473344 TMEM256-PLSCR3K7ERE1 68 aa4.39□□□□□ -1.71
CKS1B-205ENST00000473344 SLPIP03973 132 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms