RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 KRTAP4-16G5E9R7 235 aaPredicted RBP5.5□□□□□ -1.53
GGPS1-204ENST00000471812 SYS1-DBNDD2H3BUS1 97 aa5.5□□□□□ -1.53
GGPS1-204ENST00000471812 PLNP26678 52 aa5.5□□□□□ -1.53
GGPS1-204ENST00000471812 PLEKHB2Q96CS7 222 aa5.5□□□□□ -1.53
GGPS1-204ENST00000471812 C3orf79P0CE67 100 aa5.49□□□□□ -1.53
GGPS1-204ENST00000471812 HERV-K104P63124 156 aa5.49□□□□□ -1.53
GGPS1-204ENST00000471812 HIGD2AQ9BW72 106 aa5.49□□□□□ -1.53
GGPS1-204ENST00000471812 MAP1LC3CQ9BXW4 147 aa5.49□□□□□ -1.53
GGPS1-204ENST00000471812 A0A0J9YXY3 114 aa5.48□□□□□ -1.53
GGPS1-204ENST00000471812 ERC2-IT1O76042 136 aa5.48□□□□□ -1.53
GGPS1-204ENST00000471812 CRYGAP11844 174 aa5.48□□□□□ -1.53
GGPS1-204ENST00000471812 SPRR1AP35321 89 aa5.48□□□□□ -1.53
GGPS1-204ENST00000471812 LINC01545Q5VT33 79 aa5.48□□□□□ -1.53
GGPS1-204ENST00000471812 SFTA2Q6UW10 78 aa5.48□□□□□ -1.53
GGPS1-204ENST00000471812 TYMSOSQ8TAI1 123 aa5.48□□□□□ -1.53
GGPS1-204ENST00000471812 LITAFQ99732 161 aa5.48□□□□□ -1.53
GGPS1-204ENST00000471812 RETNLBQ9BQ08 111 aa5.48□□□□□ -1.53
GGPS1-204ENST00000471812 E9PLD3 99 aa5.47□□□□□ -1.53
GGPS1-204ENST00000471812 LGALS3P17931 250 aaKnown RBP5.47□□□□□ -1.53
GGPS1-204ENST00000471812 RPL13AP40429 203 aaKnown RBP5.47□□□□□ -1.53
GGPS1-204ENST00000471812 SMCR5Q8TEV8 140 aa5.47□□□□□ -1.53
GGPS1-204ENST00000471812 SPRR4Q96PI1 79 aa5.47□□□□□ -1.53
GGPS1-204ENST00000471812 PPDPFQ9H3Y8 114 aa5.47□□□□□ -1.53
GGPS1-204ENST00000471812 LOC107984156A0A0G2JMH3 177 aa5.46□□□□□ -1.54
GGPS1-204ENST00000471812 ATP6V1G1O75348 118 aa5.46□□□□□ -1.54
GGPS1-204ENST00000471812 PRR4Q16378 134 aa5.46□□□□□ -1.54
GGPS1-204ENST00000471812 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
GGPS1-204ENST00000471812 COA6Q5JTJ3 125 aaKnown RBP5.46□□□□□ -1.54
GGPS1-204ENST00000471812 ARL17AQ8IVW1 177 aa5.46□□□□□ -1.54
GGPS1-204ENST00000471812 ATOH7Q8N100 152 aa5.46□□□□□ -1.54
GGPS1-204ENST00000471812 KCNQ1DNQ9H478 68 aa5.46□□□□□ -1.54
GGPS1-204ENST00000471812 KRTDAPP60985 99 aa5.45□□□□□ -1.54
GGPS1-204ENST00000471812 HERVK_113P61574 105 aa5.45□□□□□ -1.54
GGPS1-204ENST00000471812 FAM229BQ4G0N7 80 aa5.45□□□□□ -1.54
GGPS1-204ENST00000471812 Q9BRP9 147 aa5.45□□□□□ -1.54
GGPS1-204ENST00000471812 KRTAP9-8Q9BYQ0 159 aa5.45□□□□□ -1.54
GGPS1-204ENST00000471812 NMUP48645 174 aa5.44□□□□□ -1.54
GGPS1-204ENST00000471812 MUC17Q685J3 4493 aa5.44□□□□□ -1.54
GGPS1-204ENST00000471812 IGLV6-57P01721 117 aa5.43□□□□□ -1.54
GGPS1-204ENST00000471812 DDTP30046 118 aa5.43□□□□□ -1.54
GGPS1-204ENST00000471812 PET117Q6UWS5 81 aa5.43□□□□□ -1.54
GGPS1-204ENST00000471812 LINC00337Q8N6G1 96 aa5.43□□□□□ -1.54
GGPS1-204ENST00000471812 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
GGPS1-204ENST00000471812 ETDCA0A1B0GVM5 59 aa5.42□□□□□ -1.54
GGPS1-204ENST00000471812 TRBV10-2A0A0K0K1G8 114 aa5.41□□□□□ -1.54
GGPS1-204ENST00000471812 ZNF815PA8K554 130 aa5.41□□□□□ -1.54
GGPS1-204ENST00000471812 PCP2Q8IVA1 136 aa5.41□□□□□ -1.54
GGPS1-204ENST00000471812 LINC00308Q8TCZ7 52 aa5.41□□□□□ -1.54
GGPS1-204ENST00000471812 SPANXB1Q9NS25 103 aaPredicted RBP5.41□□□□□ -1.54
GGPS1-204ENST00000471812 LINC00587B1AMM8 73 aa5.4□□□□□ -1.54
GGPS1-204ENST00000471812 NDUFC2O95298 119 aa5.4□□□□□ -1.54
GGPS1-204ENST00000471812 GAGE2AQ6NT46 116 aa5.4□□□□□ -1.54
GGPS1-204ENST00000471812 ST20-AS1Q8NBB2 130 aa5.4□□□□□ -1.54
GGPS1-204ENST00000471812 MUC2Q02817 5179 aa5.39□□□□□ -1.55
GGPS1-204ENST00000471812 Q6ZRX8 168 aa5.39□□□□□ -1.55
GGPS1-204ENST00000471812 HIST3H2BBQ8N257 126 aa5.39□□□□□ -1.55
GGPS1-204ENST00000471812 TRAV23DV6A0A075B6W5 121 aa5.38□□□□□ -1.55
GGPS1-204ENST00000471812 LINC00483Q53H64 154 aa5.38□□□□□ -1.55
GGPS1-204ENST00000471812 S100A7L2Q5SY68 101 aa5.38□□□□□ -1.55
GGPS1-204ENST00000471812 Q8NBF4 154 aa5.38□□□□□ -1.55
GGPS1-204ENST00000471812 MIEN1Q9BRT3 115 aa5.38□□□□□ -1.55
GGPS1-204ENST00000471812 TIMM17BO60830 172 aa5.37□□□□□ -1.55
GGPS1-204ENST00000471812 HIST1H2BLQ99880 126 aa5.37□□□□□ -1.55
GGPS1-204ENST00000471812 IGLV9-49A0A0B4J1Y8 123 aa5.36□□□□□ -1.55
GGPS1-204ENST00000471812 ZNF73O43830 326 aaPredicted RBP5.36□□□□□ -1.55
GGPS1-204ENST00000471812 MOBPQ13875 183 aa5.36□□□□□ -1.55
GGPS1-204ENST00000471812 SPANXCQ9NY87 97 aa5.36□□□□□ -1.55
GGPS1-204ENST00000471812 OR13C6PQ8NH95 151 aa5.35□□□□□ -1.55
GGPS1-204ENST00000471812 SPANXDQ9BXN6 97 aa5.34□□□□□ -1.55
GGPS1-204ENST00000471812 ZNF706Q9Y5V0 76 aaPredicted RBP5.34□□□□□ -1.55
GGPS1-204ENST00000471812 IGLV7-46A0A075B6I9 117 aa5.33□□□□□ -1.56
GGPS1-204ENST00000471812 MUSTN1Q8IVN3 82 aa5.33□□□□□ -1.56
GGPS1-204ENST00000471812 A0A0G2JQZ4 141 aa5.32□□□□□ -1.56
GGPS1-204ENST00000471812 C20orf202A1L168 122 aa5.32□□□□□ -1.56
GGPS1-204ENST00000471812 SNRPEP62304 92 aaKnown RBP5.32□□□□□ -1.56
GGPS1-204ENST00000471812 C6orf99Q4VX62 202 aa5.32□□□□□ -1.56
GGPS1-204ENST00000471812 SCGB1D4Q6XE38 83 aa5.32□□□□□ -1.56
GGPS1-204ENST00000471812 S100A1P23297 94 aa5.31□□□□□ -1.56
GGPS1-204ENST00000471812 COX7BP24311 80 aa5.29□□□□□ -1.56
GGPS1-204ENST00000471812 LINC01547P58512 204 aaPredicted RBP5.29□□□□□ -1.56
GGPS1-204ENST00000471812 ELOF1P60002 83 aaKnown RBP5.29□□□□□ -1.56
GGPS1-204ENST00000471812 S100A12P80511 92 aa5.29□□□□□ -1.56
GGPS1-204ENST00000471812 C9orf153Q5TBE3 101 aa5.29□□□□□ -1.56
GGPS1-204ENST00000471812 Q8N377 158 aa5.29□□□□□ -1.56
GGPS1-204ENST00000471812 S100A2P29034 98 aa5.28□□□□□ -1.56
GGPS1-204ENST00000471812 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
GGPS1-204ENST00000471812 KRTAP13-3Q3SY46 172 aa5.28□□□□□ -1.56
GGPS1-204ENST00000471812 HRCT1Q6UXD1 115 aa5.28□□□□□ -1.56
GGPS1-204ENST00000471812 KRTAP4-1Q9BYQ7 146 aa5.28□□□□□ -1.56
GGPS1-204ENST00000471812 A6NDN8 102 aa5.27□□□□□ -1.57
GGPS1-204ENST00000471812 C5orf52A6NGY3 159 aa5.27□□□□□ -1.57
GGPS1-204ENST00000471812 SPRR1BP22528 89 aa5.27□□□□□ -1.57
GGPS1-204ENST00000471812 Q1RN00 199 aa5.27□□□□□ -1.57
GGPS1-204ENST00000471812 SPAG11AQ6PDA7 123 aa5.27□□□□□ -1.57
GGPS1-204ENST00000471812 SMIM29Q86T20 159 aa5.27□□□□□ -1.57
GGPS1-204ENST00000471812 DEFB105AQ8NG35 78 aa5.27□□□□□ -1.57
GGPS1-204ENST00000471812 SMIM11BQ8TCY0 68 aa5.27□□□□□ -1.57
GGPS1-204ENST00000471812 FAT4Q6V0I7 4981 aa5.26□□□□□ -1.57
GGPS1-204ENST00000471812 IFITM1P13164 125 aa5.26□□□□□ -1.57
GGPS1-204ENST00000471812 JOSD1Q15040 202 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms