RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 IGLV6-57P01721 117 aa2.83□□□□□ -1.96
VPS50-210ENST00000471188 MP68P56378 58 aa2.83□□□□□ -1.96
VPS50-210ENST00000471188 LINC00208Q96KT6 92 aa2.83□□□□□ -1.96
VPS50-210ENST00000471188 DNAJC9-AS1A6NH13 148 aa2.83□□□□□ -1.96
VPS50-210ENST00000471188 ADORA2A-AS1P86434 159 aa2.83□□□□□ -1.96
VPS50-210ENST00000471188 KIAA0087Q14695 138 aa2.83□□□□□ -1.96
VPS50-210ENST00000471188 MUC6Q6W4X9 2439 aa2.82□□□□□ -1.96
VPS50-210ENST00000471188 VPS13CQ709C8 3753 aa2.82□□□□□ -1.96
VPS50-210ENST00000471188 CCL24O00175 119 aa2.82□□□□□ -1.96
VPS50-210ENST00000471188 WFDC13Q8IUB5 93 aa2.82□□□□□ -1.96
VPS50-210ENST00000471188 CYP4F30PQ9H0H9 118 aa2.82□□□□□ -1.96
VPS50-210ENST00000471188 CYSRT1A8MQ03 144 aa2.82□□□□□ -1.96
VPS50-210ENST00000471188 C8orf87E5RJ46 101 aa2.82□□□□□ -1.96
VPS50-210ENST00000471188 DEFB112Q30KQ8 113 aa2.82□□□□□ -1.96
VPS50-210ENST00000471188 ODF3L2Q3SX64 289 aa2.82□□□□□ -1.96
VPS50-210ENST00000471188 C7orf65Q6ZTY9 151 aa2.82□□□□□ -1.96
VPS50-210ENST00000471188 LCA10Q71F78 164 aa2.82□□□□□ -1.96
VPS50-210ENST00000471188 Q8N9P0 234 aaPredicted RBP2.82□□□□□ -1.96
VPS50-210ENST00000471188 REG3AQ06141 175 aa2.81□□□□□ -1.96
VPS50-210ENST00000471188 DEFB114Q30KQ6 69 aa2.81□□□□□ -1.96
VPS50-210ENST00000471188 C16orf74Q96GX8 76 aa2.81□□□□□ -1.96
VPS50-210ENST00000471188 K7EQZ3 153 aa2.81□□□□□ -1.96
VPS50-210ENST00000471188 ELOF1P60002 83 aaKnown RBP2.81□□□□□ -1.96
VPS50-210ENST00000471188 FBXL19-AS1Q494R0 122 aa2.81□□□□□ -1.96
VPS50-210ENST00000471188 WFDC10BQ8IUB3 73 aa2.81□□□□□ -1.96
VPS50-210ENST00000471188 ESM1Q9NQ30 184 aa2.81□□□□□ -1.96
VPS50-210ENST00000471188 ZCCHC13Q8WW36 166 aaKnown RBP2.81□□□□□ -1.96
VPS50-210ENST00000471188 WFDC10AQ9H1F0 79 aa2.81□□□□□ -1.96
VPS50-210ENST00000471188 PKD1L2Q7Z442 2459 aa2.81□□□□□ -1.96
VPS50-210ENST00000471188 NCOR2Q9Y618 2525 aa2.81□□□□□ -1.96
VPS50-210ENST00000471188 KPRPQ5T749 579 aaPredicted RBP2.8□□□□□ -1.96
VPS50-210ENST00000471188 PHF5AQ7RTV0 110 aaKnown RBP2.8□□□□□ -1.96
VPS50-210ENST00000471188 IGF2RP11717 2491 aa2.8□□□□□ -1.96
VPS50-210ENST00000471188 GCN1Q92616 2671 aaKnown RBP2.8□□□□□ -1.96
VPS50-210ENST00000471188 A6NN06 94 aa2.8□□□□□ -1.96
VPS50-210ENST00000471188 MSMBP08118 114 aa2.8□□□□□ -1.96
VPS50-210ENST00000471188 NKAPP1Q8N9T2 125 aa2.8□□□□□ -1.96
VPS50-210ENST00000471188 NAV2Q8IVL1 2488 aa2.8□□□□□ -1.96
VPS50-210ENST00000471188 IGHV4-30-2A0A087WSY4 118 aa2.8□□□□□ -1.96
VPS50-210ENST00000471188 A0A0J9YWU9 116 aa2.8□□□□□ -1.96
VPS50-210ENST00000471188 A0A1B0GUV1 79 aa2.8□□□□□ -1.96
VPS50-210ENST00000471188 EPG5Q9HCE0 2579 aa2.79□□□□□ -1.96
VPS50-210ENST00000471188 LRRK2Q5S007 2527 aa2.79□□□□□ -1.96
VPS50-210ENST00000471188 FBN2P35556 2912 aa2.79□□□□□ -1.96
VPS50-210ENST00000471188 IGHV4-30-4P0DP06 118 aa2.79□□□□□ -1.96
VPS50-210ENST00000471188 C1orf137Q5JT78 98 aa2.79□□□□□ -1.96
VPS50-210ENST00000471188 SPAG11AQ6PDA7 123 aa2.79□□□□□ -1.96
VPS50-210ENST00000471188 TEX15Q9BXT5 2789 aa2.79□□□□□ -1.96
VPS50-210ENST00000471188 ZANQ9Y493 2812 aa2.79□□□□□ -1.96
VPS50-210ENST00000471188 ZNF462Q96JM2 2506 aa2.79□□□□□ -1.96
VPS50-210ENST00000471188 POLQO75417 2590 aa2.79□□□□□ -1.96
VPS50-210ENST00000471188 LCE6AA0A183 80 aa2.78□□□□□ -1.96
VPS50-210ENST00000471188 MAPK1IP1LQ8NDC0 245 aa2.78□□□□□ -1.96
VPS50-210ENST00000471188 PRAC1Q96KF2 57 aa2.78□□□□□ -1.96
VPS50-210ENST00000471188 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.96
VPS50-210ENST00000471188 LOC101927531A0A1B0GV80 90 aa2.78□□□□□ -1.96
VPS50-210ENST00000471188 DSCR10P59022 87 aa2.78□□□□□ -1.96
VPS50-210ENST00000471188 MOBPQ13875 183 aa2.78□□□□□ -1.96
VPS50-210ENST00000471188 USP24Q9UPU5 2620 aa2.78□□□□□ -1.96
VPS50-210ENST00000471188 CELSR2Q9HCU4 2923 aa2.78□□□□□ -1.96
VPS50-210ENST00000471188 NF1P21359 2839 aa2.78□□□□□ -1.97
VPS50-210ENST00000471188 A0A1W2PNM2 257 aa2.78□□□□□ -1.97
VPS50-210ENST00000471188 H0Y9P7 68 aa2.78□□□□□ -1.97
VPS50-210ENST00000471188 Q75L30 129 aa2.78□□□□□ -1.97
VPS50-210ENST00000471188 CAMK2N2Q96S95 79 aa2.78□□□□□ -1.97
VPS50-210ENST00000471188 C6orf48Q9UBA6 75 aa2.78□□□□□ -1.97
VPS50-210ENST00000471188 ACACBO00763 2458 aa2.78□□□□□ -1.97
VPS50-210ENST00000471188 UBR5O95071 2799 aaPredicted RBP2.77□□□□□ -1.97
VPS50-210ENST00000471188 NIPBLQ6KC79 2804 aaeCLIP2.77□□□□□ -1.97
VPS50-210ENST00000471188 B4DSR2 109 aa2.77□□□□□ -1.97
VPS50-210ENST00000471188 COA5Q86WW8 74 aa2.77□□□□□ -1.97
VPS50-210ENST00000471188 KRTAP9-8Q9BYQ0 159 aa2.77□□□□□ -1.97
VPS50-210ENST00000471188 HTN3P15516 51 aa2.77□□□□□ -1.97
VPS50-210ENST00000471188 Q8N377 158 aa2.77□□□□□ -1.97
VPS50-210ENST00000471188 CCL19Q99731 98 aa2.77□□□□□ -1.97
VPS50-210ENST00000471188 ZNF702PQ9H963 129 aa2.77□□□□□ -1.97
VPS50-210ENST00000471188 PRO0255Q9UI72 69 aa2.77□□□□□ -1.97
VPS50-210ENST00000471188 SETXQ7Z333 2677 aaKnown RBP2.76□□□□□ -1.97
VPS50-210ENST00000471188 WWC2-AS2Q96NR7 200 aa2.76□□□□□ -1.97
VPS50-210ENST00000471188 MTORP42345 2549 aa2.76□□□□□ -1.97
VPS50-210ENST00000471188 ANK2Q01484 3957 aa2.76□□□□□ -1.97
VPS50-210ENST00000471188 CENPEQ02224 2701 aa2.76□□□□□ -1.97
VPS50-210ENST00000471188 DEFB4AO15263 64 aa2.76□□□□□ -1.97
VPS50-210ENST00000471188 GIG44P09565 113 aaPredicted RBP2.76□□□□□ -1.97
VPS50-210ENST00000471188 VPREB1P12018 145 aa2.76□□□□□ -1.97
VPS50-210ENST00000471188 Q8NBF4 154 aa2.76□□□□□ -1.97
VPS50-210ENST00000471188 CCDC168Q8NDH2 2452 aa2.76□□□□□ -1.97
VPS50-210ENST00000471188 UTP20O75691 2785 aaKnown RBP2.76□□□□□ -1.97
VPS50-210ENST00000471188 LINC00313P59037 77 aa2.76□□□□□ -1.97
VPS50-210ENST00000471188 PCOTHQ58A44 107 aa2.76□□□□□ -1.97
VPS50-210ENST00000471188 NBPF19A0A087WUL8 3843 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 MXRA5Q9NR99 2828 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 A0A0G2JQZ4 141 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 A0A1W2PNN7 141 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 DSCR9P59020 149 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 SERTAD4-AS1Q5TG53 156 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 CASC2Q6XLA1 102 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 C4orf3Q8WVX3 66 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 CHD8Q9HCK8 2581 aa2.75□□□□□ -1.97
VPS50-210ENST00000471188 HIVEP2P31629 2446 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms