RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 SPAG11AQ6PDA7 123 aa1.43□□□□□ -2.18
UBXN4-206ENST00000470687 SMIM7Q9BQ49 75 aa1.43□□□□□ -2.18
UBXN4-206ENST00000470687 RNASE7Q9H1E1 156 aaKnown RBP1.43□□□□□ -2.18
UBXN4-206ENST00000470687 NXT2Q9NPJ8 142 aaKnown RBP1.43□□□□□ -2.18
UBXN4-206ENST00000470687 NAT8Q9UHE5 227 aa1.43□□□□□ -2.18
UBXN4-206ENST00000470687 PLECQ15149 4684 aaKnown RBP1.43□□□□□ -2.18
UBXN4-206ENST00000470687 VPS13DQ5THJ4 4388 aa1.43□□□□□ -2.18
UBXN4-206ENST00000470687 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.42□□□□□ -2.18
UBXN4-206ENST00000470687 IGKV2-29A2NJV5 120 aaPredicted RBP1.42□□□□□ -2.18
UBXN4-206ENST00000470687 LINC00587B1AMM8 73 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 MT-ND4LP03901 98 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 CRYGAP11844 174 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 SPAG11BQ08648 103 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 COX17Q14061 63 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 FAM229BQ4G0N7 80 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 C1orf195Q5TG92 126 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 ALKAL2Q6UX46 152 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 TMEM136Q6ZRR5 245 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 AKAP14Q86UN6 197 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 Q8IZM0 81 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 RPL39LQ96EH5 51 aaKnown RBP1.42□□□□□ -2.18
UBXN4-206ENST00000470687 TMEM141Q96I45 108 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 SMIM2Q9BVW6 85 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 GNB1LQ9BYB4 327 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 TMEM242Q9NWH2 141 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 V9GYV3 84 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 PKHD1P08F94 4074 aa1.42□□□□□ -2.18
UBXN4-206ENST00000470687 TRAV9-1A0A075B6T8 112 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 A0A1B0GVG6 124 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 A0A1B0GW54 56 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 A0A1W2PNN7 141 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 F8VRH5 84 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 H3BRM9 83 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 IGLV6-57P01721 117 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 SRP19P09132 144 aaKnown RBP1.41□□□□□ -2.18
UBXN4-206ENST00000470687 RAB14P61106 215 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 UBE2BP63146 152 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 S100A12P80511 92 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 MRPL51Q4U2R6 128 aaKnown RBP1.41□□□□□ -2.18
UBXN4-206ENST00000470687 C5orf38Q86SI9 138 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 Q8N8P6 123 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 AMELXQ99217 191 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 CYSLTR1Q9Y271 337 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 HECTD4Q9Y4D8 3996 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 ABCA13Q86UQ4 5058 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 PKD1P98161 4303 aa1.41□□□□□ -2.18
UBXN4-206ENST00000470687 IGIPA6NJ69 53 aa1.4□□□□□ -2.19
UBXN4-206ENST00000470687 D6R8Y8 96 aa1.4□□□□□ -2.19
UBXN4-206ENST00000470687 BCE1O60756 84 aa1.4□□□□□ -2.19
UBXN4-206ENST00000470687 FABP9Q0Z7S8 132 aa1.4□□□□□ -2.19
UBXN4-206ENST00000470687 UNQ6190/PRO20217Q6UXQ8 127 aa1.4□□□□□ -2.19
UBXN4-206ENST00000470687 FP248Q71RG6 208 aaPredicted RBP1.4□□□□□ -2.19
UBXN4-206ENST00000470687 PRELID3AQ96N28 172 aa1.4□□□□□ -2.19
UBXN4-206ENST00000470687 C6orf48Q9UBA6 75 aa1.4□□□□□ -2.19
UBXN4-206ENST00000470687 C22orf24Q9Y442 160 aa1.4□□□□□ -2.19
UBXN4-206ENST00000470687 IGKV2D-26A0A0A0MRZ7 120 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 LINC01546A6NGU7 62 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 SPINK1P00995 79 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 NPYP01303 97 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 S100PP25815 95 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 RAB5BP61020 215 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 RPS29P62273 56 aaKnown RBP1.39□□□□□ -2.19
UBXN4-206ENST00000470687 IFITM2Q01629 132 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 ADIRFQ15847 76 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 TPRXLQ17RH7 258 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 KRTAP13-2Q52LG2 175 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 PHF5AQ7RTV0 110 aaKnown RBP1.39□□□□□ -2.19
UBXN4-206ENST00000470687 FAM19A2Q8N3H0 131 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 TOMM6Q96B49 74 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 SCGB3A1Q96QR1 104 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 NDUFA12Q9UI09 145 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 FAT2Q9NYQ8 4349 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 DNAH11Q96DT5 4516 aa1.39□□□□□ -2.19
UBXN4-206ENST00000470687 DNAH2Q9P225 4427 aa1.38□□□□□ -2.19
UBXN4-206ENST00000470687 HSPG2P98160 4391 aa1.38□□□□□ -2.19
UBXN4-206ENST00000470687 RPL39P62891 51 aaKnown RBP1.38□□□□□ -2.19
UBXN4-206ENST00000470687 JOSD1Q15040 202 aaPredicted RBP1.38□□□□□ -2.19
UBXN4-206ENST00000470687 Q6ZUT4 128 aa1.38□□□□□ -2.19
UBXN4-206ENST00000470687 SSBP3-AS1Q7Z2R9 100 aa1.38□□□□□ -2.19
UBXN4-206ENST00000470687 ADM2Q7Z4H4 148 aa1.38□□□□□ -2.19
UBXN4-206ENST00000470687 MIEN1Q9BRT3 115 aa1.38□□□□□ -2.19
UBXN4-206ENST00000470687 CST9LQ9H4G1 147 aa1.38□□□□□ -2.19
UBXN4-206ENST00000470687 CDKN2A-AS1Q9UH64 79 aa1.38□□□□□ -2.19
UBXN4-206ENST00000470687 DNAH10Q8IVF4 4471 aa1.38□□□□□ -2.19
UBXN4-206ENST00000470687 DNAH6Q9C0G6 4158 aa1.37□□□□□ -2.19
UBXN4-206ENST00000470687 DNAH17Q9UFH2 4485 aa1.37□□□□□ -2.19
UBXN4-206ENST00000470687 A0A1B0GU33 70 aa1.37□□□□□ -2.19
UBXN4-206ENST00000470687 HINT1P49773 126 aaPredicted RBP1.37□□□□□ -2.19
UBXN4-206ENST00000470687 MRPL54Q6P161 138 aaKnown RBP1.37□□□□□ -2.19
UBXN4-206ENST00000470687 C2orf82Q6UX34 121 aa1.37□□□□□ -2.19
UBXN4-206ENST00000470687 LINC00304Q8N9R0 145 aa1.37□□□□□ -2.19
UBXN4-206ENST00000470687 COX7B2Q8TF08 81 aa1.37□□□□□ -2.19
UBXN4-206ENST00000470687 SMCO4Q9NRQ5 59 aa1.37□□□□□ -2.19
UBXN4-206ENST00000470687 TOMM7Q9P0U1 55 aa1.37□□□□□ -2.19
UBXN4-206ENST00000470687 R4GN34 69 aa1.37□□□□□ -2.19
UBXN4-206ENST00000470687 LOC107984156A0A0G2JMH3 177 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 TRBV10-2A0A0K0K1G8 114 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 M0R378 163 aa1.36□□□□□ -2.19
UBXN4-206ENST00000470687 APOBP04114 4563 aaKnown RBP1.36□□□□□ -2.19
UBXN4-206ENST00000470687 IGKV4-1P06312 121 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms