RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 COX6B2Q6YFQ2 88 aa4.82□□□□□ -1.64
XRN1-208ENST00000470537 A0A0U1RRA0 63 aa4.81□□□□□ -1.64
XRN1-208ENST00000470537 C5orf52A6NGY3 159 aa4.81□□□□□ -1.64
XRN1-208ENST00000470537 S100PP25815 95 aa4.81□□□□□ -1.64
XRN1-208ENST00000470537 HERV-K104P63124 156 aa4.81□□□□□ -1.64
XRN1-208ENST00000470537 MEIG1Q5JSS6 88 aa4.81□□□□□ -1.64
XRN1-208ENST00000470537 SLC25A34Q6PIV7 304 aa4.81□□□□□ -1.64
XRN1-208ENST00000470537 TRBV10-3A0A0K0K1G6 114 aa4.8□□□□□ -1.64
XRN1-208ENST00000470537 NCR3O14931 201 aa4.8□□□□□ -1.64
XRN1-208ENST00000470537 BAGE3Q86Y29 109 aa4.8□□□□□ -1.64
XRN1-208ENST00000470537 TRBV10-2A0A0K0K1G8 114 aa4.79□□□□□ -1.64
XRN1-208ENST00000470537 SMIM13P0DJ93 91 aa4.79□□□□□ -1.64
XRN1-208ENST00000470537 HINT1P49773 126 aaPredicted RBP4.79□□□□□ -1.64
XRN1-208ENST00000470537 Q6ZRX8 168 aa4.79□□□□□ -1.64
XRN1-208ENST00000470537 MIR7-3HGQ8N6C7 128 aa4.79□□□□□ -1.64
XRN1-208ENST00000470537 CBY1Q9Y3M2 126 aa4.79□□□□□ -1.64
XRN1-208ENST00000470537 C11orf86A6NJI1 115 aa4.78□□□□□ -1.64
XRN1-208ENST00000470537 HBDP02042 147 aa4.78□□□□□ -1.64
XRN1-208ENST00000470537 LINC00614P0C842 121 aa4.78□□□□□ -1.64
XRN1-208ENST00000470537 DDTP30046 118 aa4.78□□□□□ -1.64
XRN1-208ENST00000470537 C9orf92A6NGG3 77 aa4.77□□□□□ -1.65
XRN1-208ENST00000470537 ERC2-IT1O76042 136 aa4.77□□□□□ -1.65
XRN1-208ENST00000470537 IGLV6-57P01721 117 aa4.77□□□□□ -1.65
XRN1-208ENST00000470537 FABP9Q0Z7S8 132 aa4.77□□□□□ -1.65
XRN1-208ENST00000470537 S100A7L2Q5SY68 101 aa4.77□□□□□ -1.65
XRN1-208ENST00000470537 MIEN1Q9BRT3 115 aa4.77□□□□□ -1.65
XRN1-208ENST00000470537 SEC11CQ9BY50 192 aa4.77□□□□□ -1.65
XRN1-208ENST00000470537 MYMXA0A1B0GTQ4 84 aa4.76□□□□□ -1.65
XRN1-208ENST00000470537 IFITM2Q01629 132 aa4.76□□□□□ -1.65
XRN1-208ENST00000470537 Q9BRP9 147 aa4.76□□□□□ -1.65
XRN1-208ENST00000470537 CHTOPQ9Y3Y2 248 aaKnown RBP4.76□□□□□ -1.65
XRN1-208ENST00000470537 TMEM223A0PJW6 202 aa4.75□□□□□ -1.65
XRN1-208ENST00000470537 COMMD7Q86VX2 200 aa4.75□□□□□ -1.65
XRN1-208ENST00000470537 SPANXB1Q9NS25 103 aaPredicted RBP4.75□□□□□ -1.65
XRN1-208ENST00000470537 LOC107984156A0A0G2JMH3 177 aa4.74□□□□□ -1.65
XRN1-208ENST00000470537 CD164Q04900 197 aa4.74□□□□□ -1.65
XRN1-208ENST00000470537 ARL17AQ8IVW1 177 aa4.74□□□□□ -1.65
XRN1-208ENST00000470537 LAMTOR3Q9UHA4 124 aa4.74□□□□□ -1.65
XRN1-208ENST00000470537 NDUFC2O95298 119 aa4.73□□□□□ -1.65
XRN1-208ENST00000470537 CFC1P0CG37 223 aa4.73□□□□□ -1.65
XRN1-208ENST00000470537 TRAV23DV6A0A075B6W5 121 aa4.72□□□□□ -1.65
XRN1-208ENST00000470537 A0A096LNJ9 63 aa4.72□□□□□ -1.65
XRN1-208ENST00000470537 TRAV12-1A0A0B4J245 112 aa4.72□□□□□ -1.65
XRN1-208ENST00000470537 ZNF73O43830 326 aaPredicted RBP4.72□□□□□ -1.65
XRN1-208ENST00000470537 HRCT1Q6UXD1 115 aa4.72□□□□□ -1.65
XRN1-208ENST00000470537 RPL37P61927 97 aaKnown RBP4.71□□□□□ -1.66
XRN1-208ENST00000470537 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
XRN1-208ENST00000470537 PRO1933Q9H354 126 aa4.71□□□□□ -1.66
XRN1-208ENST00000470537 DHRS4-AS1Q9P1J3 65 aa4.71□□□□□ -1.66
XRN1-208ENST00000470537 H7C2G1 150 aa4.7□□□□□ -1.66
XRN1-208ENST00000470537 SPRR1BP22528 89 aa4.7□□□□□ -1.66
XRN1-208ENST00000470537 PMCHL1Q16048 86 aa4.7□□□□□ -1.66
XRN1-208ENST00000470537 Q5XG85 94 aa4.7□□□□□ -1.66
XRN1-208ENST00000470537 C18orf32Q8TCD1 76 aa4.7□□□□□ -1.66
XRN1-208ENST00000470537 IFI27L1Q96BM0 104 aa4.7□□□□□ -1.66
XRN1-208ENST00000470537 AKR1D1P51857 326 aa4.69□□□□□ -1.66
XRN1-208ENST00000470537 UQCC3Q6UW78 93 aa4.69□□□□□ -1.66
XRN1-208ENST00000470537 ST20-AS1Q8NBB2 130 aa4.69□□□□□ -1.66
XRN1-208ENST00000470537 TRAPPC1Q9Y5R8 145 aa4.69□□□□□ -1.66
XRN1-208ENST00000470537 NMUP48645 174 aa4.68□□□□□ -1.66
XRN1-208ENST00000470537 TAL2Q16559 108 aa4.68□□□□□ -1.66
XRN1-208ENST00000470537 TMEM218A2RU14 115 aa4.67□□□□□ -1.66
XRN1-208ENST00000470537 RHEBQ15382 184 aa4.67□□□□□ -1.66
XRN1-208ENST00000470537 Q6Q795 121 aa4.67□□□□□ -1.66
XRN1-208ENST00000470537 CHCHD1Q96BP2 118 aaKnown RBP4.67□□□□□ -1.66
XRN1-208ENST00000470537 URB1-AS1Q96HZ7 61 aa4.67□□□□□ -1.66
XRN1-208ENST00000470537 A0A0A0MQY5 61 aa4.66□□□□□ -1.66
XRN1-208ENST00000470537 LEPROTO15243 131 aa4.66□□□□□ -1.66
XRN1-208ENST00000470537 TCL1BO95988 128 aa4.66□□□□□ -1.66
XRN1-208ENST00000470537 HERVK_113P61574 105 aa4.66□□□□□ -1.66
XRN1-208ENST00000470537 ATP11AUNQ6ZP68 121 aa4.66□□□□□ -1.66
XRN1-208ENST00000470537 IGKV2D-30A0A075B6S6 120 aa4.65□□□□□ -1.67
XRN1-208ENST00000470537 TEX49A0A1B0GTD5 131 aa4.65□□□□□ -1.67
XRN1-208ENST00000470537 J3QQQ9 107 aa4.65□□□□□ -1.67
XRN1-208ENST00000470537 LGALS3P17931 250 aaKnown RBP4.65□□□□□ -1.67
XRN1-208ENST00000470537 PLNP26678 52 aa4.65□□□□□ -1.67
XRN1-208ENST00000470537 C10orf91Q5T1B1 145 aa4.65□□□□□ -1.67
XRN1-208ENST00000470537 C1orf195Q5TG92 126 aa4.65□□□□□ -1.67
XRN1-208ENST00000470537 CLLU1Q5K131 121 aa4.64□□□□□ -1.67
XRN1-208ENST00000470537 OR13C6PQ8NH95 151 aa4.64□□□□□ -1.67
XRN1-208ENST00000470537 RPS10P5Q9NQ39 176 aa4.64□□□□□ -1.67
XRN1-208ENST00000470537 Q1RN00 199 aa4.63□□□□□ -1.67
XRN1-208ENST00000470537 SMIM29Q86T20 159 aa4.63□□□□□ -1.67
XRN1-208ENST00000470537 DEFB105AQ8NG35 78 aa4.63□□□□□ -1.67
XRN1-208ENST00000470537 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
XRN1-208ENST00000470537 C20orf202A1L168 122 aa4.62□□□□□ -1.67
XRN1-208ENST00000470537 HSBP1O75506 76 aa4.62□□□□□ -1.67
XRN1-208ENST00000470537 SPANXCQ9NY87 97 aa4.62□□□□□ -1.67
XRN1-208ENST00000470537 TRBV20-1A0A075B6N2 111 aa4.61□□□□□ -1.67
XRN1-208ENST00000470537 H0Y8G0 127 aa4.61□□□□□ -1.67
XRN1-208ENST00000470537 COX7BP24311 80 aa4.61□□□□□ -1.67
XRN1-208ENST00000470537 LINC00518Q8N0U6 118 aa4.61□□□□□ -1.67
XRN1-208ENST00000470537 SPANXDQ9BXN6 97 aa4.61□□□□□ -1.67
XRN1-208ENST00000470537 LINC00846Q9NV44 126 aa4.61□□□□□ -1.67
XRN1-208ENST00000470537 TSPEAR-AS2P59090 65 aa4.6□□□□□ -1.67
XRN1-208ENST00000470537 ELOF1P60002 83 aaKnown RBP4.6□□□□□ -1.67
XRN1-208ENST00000470537 TRBV7-6A0A0J9YX20 115 aa4.59□□□□□ -1.67
XRN1-208ENST00000470537 DPM2O94777 84 aa4.59□□□□□ -1.67
XRN1-208ENST00000470537 LEPROTL1O95214 131 aa4.59□□□□□ -1.67
XRN1-208ENST00000470537 NPC2P61916 151 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms