RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 TRAV23DV6A0A075B6W5 121 aa6.41□□□□□ -1.38
SMC1A-206ENST00000470241 PRLHP81277 87 aa6.41□□□□□ -1.38
SMC1A-206ENST00000470241 FAM19A1Q7Z5A9 133 aa6.41□□□□□ -1.38
SMC1A-206ENST00000470241 CEND1Q8N111 149 aa6.41□□□□□ -1.38
SMC1A-206ENST00000470241 A6NDN8 102 aa6.4□□□□□ -1.38
SMC1A-206ENST00000470241 RPL28P46779 137 aaKnown RBP6.4□□□□□ -1.38
SMC1A-206ENST00000470241 UBE2AP49459 152 aa6.4□□□□□ -1.38
SMC1A-206ENST00000470241 HSD52Q0P140 79 aa6.4□□□□□ -1.38
SMC1A-206ENST00000470241 LRP1Q07954 4544 aaKnown RBP6.39□□□□□ -1.39
SMC1A-206ENST00000470241 TRAV13-2A0A0B4J235 113 aa6.39□□□□□ -1.39
SMC1A-206ENST00000470241 B5MCH6 92 aa6.39□□□□□ -1.39
SMC1A-206ENST00000470241 ZNF73O43830 326 aaPredicted RBP6.39□□□□□ -1.39
SMC1A-206ENST00000470241 FXYD2P54710 66 aa6.39□□□□□ -1.39
SMC1A-206ENST00000470241 DIRC1Q969H9 104 aa6.39□□□□□ -1.39
SMC1A-206ENST00000470241 CBY1Q9Y3M2 126 aa6.39□□□□□ -1.39
SMC1A-206ENST00000470241 MYCBP2O75592 4640 aa6.38□□□□□ -1.39
SMC1A-206ENST00000470241 ETDCA0A1B0GVM5 59 aa6.38□□□□□ -1.39
SMC1A-206ENST00000470241 H0Y9J4 135 aa6.38□□□□□ -1.39
SMC1A-206ENST00000470241 CFC1BP0CG36 223 aa6.38□□□□□ -1.39
SMC1A-206ENST00000470241 CFC1P0CG37 223 aa6.38□□□□□ -1.39
SMC1A-206ENST00000470241 A0A0B4J2C4 111 aa6.36□□□□□ -1.39
SMC1A-206ENST00000470241 RPL13AP40429 203 aaKnown RBP6.36□□□□□ -1.39
SMC1A-206ENST00000470241 C6orf99Q4VX62 202 aa6.36□□□□□ -1.39
SMC1A-206ENST00000470241 Q6ZRX8 168 aa6.36□□□□□ -1.39
SMC1A-206ENST00000470241 SMIM11BQ8TCY0 68 aa6.36□□□□□ -1.39
SMC1A-206ENST00000470241 SMCR5Q8TEV8 140 aa6.36□□□□□ -1.39
SMC1A-206ENST00000470241 FLG2Q5D862 2391 aaPredicted RBP6.36□□□□□ -1.39
SMC1A-206ENST00000470241 TMEM238LA0A1B0GVL6 79 aa6.35□□□□□ -1.39
SMC1A-206ENST00000470241 A6NJY4 79 aa6.35□□□□□ -1.39
SMC1A-206ENST00000470241 TSTD3H0UI37 97 aa6.35□□□□□ -1.39
SMC1A-206ENST00000470241 Q9BRP9 147 aa6.35□□□□□ -1.39
SMC1A-206ENST00000470241 HIGD2AQ9BW72 106 aa6.35□□□□□ -1.39
SMC1A-206ENST00000470241 KRTAP1-4P0C5Y4 121 aa6.34□□□□□ -1.39
SMC1A-206ENST00000470241 CTAG1AP78358 180 aa6.34□□□□□ -1.39
SMC1A-206ENST00000470241 BVES-AS1Q5T3Y7 98 aa6.34□□□□□ -1.39
SMC1A-206ENST00000470241 RAB37Q96AX2 223 aa6.34□□□□□ -1.39
SMC1A-206ENST00000470241 TRBV7-6A0A0J9YX20 115 aa6.33□□□□□ -1.4
SMC1A-206ENST00000470241 COX7BP24311 80 aa6.33□□□□□ -1.4
SMC1A-206ENST00000470241 HINT1P49773 126 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-206ENST00000470241 ELOF1P60002 83 aaKnown RBP6.33□□□□□ -1.4
SMC1A-206ENST00000470241 NHP2Q9NX24 153 aaKnown RBP6.33□□□□□ -1.4
SMC1A-206ENST00000470241 A0A1B0GWB2 263 aa6.32□□□□□ -1.4
SMC1A-206ENST00000470241 KRTAP29-1A8MX34 341 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-206ENST00000470241 H7C2G1 150 aa6.32□□□□□ -1.4
SMC1A-206ENST00000470241 ERC2-IT1O76042 136 aa6.32□□□□□ -1.4
SMC1A-206ENST00000470241 OXTP01178 125 aa6.32□□□□□ -1.4
SMC1A-206ENST00000470241 K7ERJ3 54 aa6.31□□□□□ -1.4
SMC1A-206ENST00000470241 LINC01600Q96MT4 127 aa6.31□□□□□ -1.4
SMC1A-206ENST00000470241 PRO1854Q9UHT4 67 aa6.31□□□□□ -1.4
SMC1A-206ENST00000470241 TNXBP22105 4242 aa6.3□□□□□ -1.4
SMC1A-206ENST00000470241 SPRR4Q96PI1 79 aa6.3□□□□□ -1.4
SMC1A-206ENST00000470241 M0R143 59 aa6.29□□□□□ -1.4
SMC1A-206ENST00000470241 MT1HL1P0DM35 61 aa6.29□□□□□ -1.4
SMC1A-206ENST00000470241 ANAPC11Q9NYG5 84 aa6.29□□□□□ -1.4
SMC1A-206ENST00000470241 DHRS4-AS1Q9P1J3 65 aa6.29□□□□□ -1.4
SMC1A-206ENST00000470241 VAMP3Q15836 100 aa6.28□□□□□ -1.4
SMC1A-206ENST00000470241 Q1RN00 199 aa6.28□□□□□ -1.4
SMC1A-206ENST00000470241 PRR26Q8N8Z3 221 aa6.28□□□□□ -1.4
SMC1A-206ENST00000470241 A0A087X002 238 aa6.27□□□□□ -1.41
SMC1A-206ENST00000470241 KRTAP10-8P60410 259 aa6.27□□□□□ -1.41
SMC1A-206ENST00000470241 ST20-AS1Q8NBB2 130 aa6.27□□□□□ -1.41
SMC1A-206ENST00000470241 ZNF706Q9Y5V0 76 aaPredicted RBP6.27□□□□□ -1.41
SMC1A-206ENST00000470241 FAM229BQ4G0N7 80 aa6.26□□□□□ -1.41
SMC1A-206ENST00000470241 LINC00483Q53H64 154 aa6.26□□□□□ -1.41
SMC1A-206ENST00000470241 GAGE2AQ6NT46 116 aa6.26□□□□□ -1.41
SMC1A-206ENST00000470241 LINC00575Q6W349 94 aa6.26□□□□□ -1.41
SMC1A-206ENST00000470241 J3QL48 77 aa6.25□□□□□ -1.41
SMC1A-206ENST00000470241 TSPAN13O95857 204 aa6.25□□□□□ -1.41
SMC1A-206ENST00000470241 TRIAP1O43715 76 aa6.24□□□□□ -1.41
SMC1A-206ENST00000470241 CRYGAP11844 174 aa6.24□□□□□ -1.41
SMC1A-206ENST00000470241 KRTAP13-2Q52LG2 175 aa6.24□□□□□ -1.41
SMC1A-206ENST00000470241 H0YGX0 51 aa6.23□□□□□ -1.41
SMC1A-206ENST00000470241 SPRR1BP22528 89 aa6.23□□□□□ -1.41
SMC1A-206ENST00000470241 BATFQ16520 125 aa6.23□□□□□ -1.41
SMC1A-206ENST00000470241 FAM218AQ96MZ4 157 aa6.23□□□□□ -1.41
SMC1A-206ENST00000470241 hADV29S1A0JD25 119 aa6.22□□□□□ -1.41
SMC1A-206ENST00000470241 SLC25A20O43772 301 aa6.22□□□□□ -1.41
SMC1A-206ENST00000470241 LINC01547P58512 204 aaPredicted RBP6.22□□□□□ -1.41
SMC1A-206ENST00000470241 C3orf22Q8N5N4 141 aa6.22□□□□□ -1.41
SMC1A-206ENST00000470241 IGLV5-48A0A075B6I7 105 aa6.21□□□□□ -1.42
SMC1A-206ENST00000470241 PSMB2P49721 201 aa6.21□□□□□ -1.42
SMC1A-206ENST00000470241 DEFB105AQ8NG35 78 aa6.21□□□□□ -1.42
SMC1A-206ENST00000470241 Q6ZQY7 126 aa6.2□□□□□ -1.42
SMC1A-206ENST00000470241 TEX49A0A1B0GTD5 131 aa6.19□□□□□ -1.42
SMC1A-206ENST00000470241 COX6CP09669 75 aa6.19□□□□□ -1.42
SMC1A-206ENST00000470241 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.19□□□□□ -1.42
SMC1A-206ENST00000470241 Q8N377 158 aa6.19□□□□□ -1.42
SMC1A-206ENST00000470241 TYMSOSQ8TAI1 123 aa6.19□□□□□ -1.42
SMC1A-206ENST00000470241 CLEC2BQ92478 149 aa6.19□□□□□ -1.42
SMC1A-206ENST00000470241 SNHG12Q9BXW3 62 aa6.19□□□□□ -1.42
SMC1A-206ENST00000470241 A0A1B0GX51 115 aa6.18□□□□□ -1.42
SMC1A-206ENST00000470241 SMIM29Q86T20 159 aa6.18□□□□□ -1.42
SMC1A-206ENST00000470241 NAA38Q9BRA0 125 aaKnown RBP6.18□□□□□ -1.42
SMC1A-206ENST00000470241 DMBT1Q9UGM3 2413 aaPredicted RBP6.18□□□□□ -1.42
SMC1A-206ENST00000470241 IGLV9-49A0A0B4J1Y8 123 aa6.17□□□□□ -1.42
SMC1A-206ENST00000470241 PCP4L1A6NKN8 68 aa6.17□□□□□ -1.42
SMC1A-206ENST00000470241 HERC1Q15751 4861 aa6.17□□□□□ -1.42
SMC1A-206ENST00000470241 TAX1BP3O14907 124 aa6.16□□□□□ -1.42
SMC1A-206ENST00000470241 SNCGO76070 127 aa6.16□□□□□ -1.42
SMC1A-206ENST00000470241 SCGB1C2P0DMR2 95 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 218.6 ms