RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 KRTAP5-10Q6L8G5 202 aa0.87□□□□□ -2.27
BRCA2-202ENST00000470094 UBL5Q9BZL1 73 aa0.87□□□□□ -2.27
BRCA2-202ENST00000470094 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
BRCA2-202ENST00000470094 AHCTF1Q8WYP5 2266 aa0.86□□□□□ -2.27
BRCA2-202ENST00000470094 Q96NJ1 140 aa0.86□□□□□ -2.27
BRCA2-202ENST00000470094 CNFNQ9BYD5 112 aa0.86□□□□□ -2.27
BRCA2-202ENST00000470094 TMEM167BQ9NRX6 74 aa0.86□□□□□ -2.27
BRCA2-202ENST00000470094 CADP27708 2225 aa0.86□□□□□ -2.27
BRCA2-202ENST00000470094 URB1O60287 2271 aaKnown RBP0.85□□□□□ -2.27
BRCA2-202ENST00000470094 CPSF4LA6NMK7 179 aaKnown RBP0.85□□□□□ -2.27
BRCA2-202ENST00000470094 COX17Q14061 63 aa0.85□□□□□ -2.27
BRCA2-202ENST00000470094 AHNAK2Q8IVF2 5795 aa0.84□□□□□ -2.27
BRCA2-202ENST00000470094 DEFB131BA0A096LNP1 70 aa0.84□□□□□ -2.27
BRCA2-202ENST00000470094 ETDCA0A1B0GVM5 59 aa0.84□□□□□ -2.27
BRCA2-202ENST00000470094 M0R1W7 72 aa0.84□□□□□ -2.27
BRCA2-202ENST00000470094 M0R3E3 92 aa0.84□□□□□ -2.27
BRCA2-202ENST00000470094 LY6G6CO95867 125 aa0.84□□□□□ -2.27
BRCA2-202ENST00000470094 FXYD6P3P58550 94 aa0.84□□□□□ -2.27
BRCA2-202ENST00000470094 PDE4DIPQ5VU43 2346 aa0.83□□□□□ -2.28
BRCA2-202ENST00000470094 TRGV1A0A0A0MS02 117 aa0.83□□□□□ -2.28
BRCA2-202ENST00000470094 NDUFA4O00483 81 aa0.83□□□□□ -2.28
BRCA2-202ENST00000470094 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.83□□□□□ -2.28
BRCA2-202ENST00000470094 FDCSPQ8NFU4 85 aa0.83□□□□□ -2.28
BRCA2-202ENST00000470094 SSC5DA1L4H1 1573 aa0.83□□□□□ -2.28
BRCA2-202ENST00000470094 ASXL3Q9C0F0 2248 aa0.83□□□□□ -2.28
BRCA2-202ENST00000470094 ABCA1O95477 2261 aa0.82□□□□□ -2.28
BRCA2-202ENST00000470094 CNOT1A5YKK6 2376 aaKnown RBP0.82□□□□□ -2.28
BRCA2-202ENST00000470094 SPINK4O60575 86 aa0.82□□□□□ -2.28
BRCA2-202ENST00000470094 COX7BP24311 80 aa0.82□□□□□ -2.28
BRCA2-202ENST00000470094 CRIP1P50238 77 aa0.82□□□□□ -2.28
BRCA2-202ENST00000470094 PRB3Q04118 309 aaPredicted RBP0.82□□□□□ -2.28
BRCA2-202ENST00000470094 WFDC9Q8NEX5 89 aa0.82□□□□□ -2.28
BRCA2-202ENST00000470094 GAFA1Q96PS6 74 aa0.82□□□□□ -2.28
BRCA2-202ENST00000470094 GVQW2A0A096LPI5 108 aaPredicted RBP0.81□□□□□ -2.28
BRCA2-202ENST00000470094 LYNX1G3V0Z9 82 aa0.81□□□□□ -2.28
BRCA2-202ENST00000470094 NDUFA3O95167 84 aa0.81□□□□□ -2.28
BRCA2-202ENST00000470094 SPINK9Q5DT21 86 aa0.81□□□□□ -2.28
BRCA2-202ENST00000470094 SMIM11BQ8TCY0 68 aa0.81□□□□□ -2.28
BRCA2-202ENST00000470094 NOTCH1P46531 2555 aa0.8□□□□□ -2.28
BRCA2-202ENST00000470094 MRPL33O75394 65 aaKnown RBP0.8□□□□□ -2.28
BRCA2-202ENST00000470094 DEFB112Q30KQ8 113 aa0.8□□□□□ -2.28
BRCA2-202ENST00000470094 LINC01590Q5TEZ4 76 aa0.8□□□□□ -2.28
BRCA2-202ENST00000470094 LINC00308Q8TCZ7 52 aa0.8□□□□□ -2.28
BRCA2-202ENST00000470094 SMIM2Q9BVW6 85 aa0.8□□□□□ -2.28
BRCA2-202ENST00000470094 TNRC6CQ9HCJ0 1690 aaKnown RBP0.79□□□□□ -2.28
BRCA2-202ENST00000470094 A0A1B0GU69 56 aa0.79□□□□□ -2.28
BRCA2-202ENST00000470094 G3V318 75 aa0.79□□□□□ -2.28
BRCA2-202ENST00000470094 NDUFA1O15239 70 aa0.79□□□□□ -2.28
BRCA2-202ENST00000470094 ACYP2P14621 99 aa0.79□□□□□ -2.28
BRCA2-202ENST00000470094 POLR2KP53803 58 aaKnown RBP0.79□□□□□ -2.28
BRCA2-202ENST00000470094 LINC00158P58513 81 aa0.79□□□□□ -2.28
BRCA2-202ENST00000470094 HAMPP81172 84 aa0.79□□□□□ -2.28
BRCA2-202ENST00000470094 COX6B2Q6YFQ2 88 aa0.79□□□□□ -2.28
BRCA2-202ENST00000470094 PTPRQQ9UMZ3 2332 aa0.78□□□□□ -2.28
BRCA2-202ENST00000470094 Q6ZRX8 168 aa0.78□□□□□ -2.28
BRCA2-202ENST00000470094 Q8IZM0 81 aa0.78□□□□□ -2.28
BRCA2-202ENST00000470094 ARHGAP5-AS1Q96IT6 56 aa0.78□□□□□ -2.28
BRCA2-202ENST00000470094 A0A0C4DFX4 3053 aa0.78□□□□□ -2.29
BRCA2-202ENST00000470094 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.77□□□□□ -2.29
BRCA2-202ENST00000470094 A0A0D9SG42 100 aa0.77□□□□□ -2.29
BRCA2-202ENST00000470094 TFF3Q07654 80 aa0.77□□□□□ -2.29
BRCA2-202ENST00000470094 RPS27LQ71UM5 84 aaKnown RBP0.77□□□□□ -2.29
BRCA2-202ENST00000470094 C10orf95Q9H7T3 257 aa0.77□□□□□ -2.29
BRCA2-202ENST00000470094 CDKN2A-AS1Q9UH64 79 aa0.77□□□□□ -2.29
BRCA2-202ENST00000470094 FBN2P35556 2912 aa0.76□□□□□ -2.29
BRCA2-202ENST00000470094 USF3Q68DE3 2245 aa0.76□□□□□ -2.29
BRCA2-202ENST00000470094 IGLV5-48A0A075B6I7 105 aa0.76□□□□□ -2.29
BRCA2-202ENST00000470094 K7EQZ3 153 aa0.76□□□□□ -2.29
BRCA2-202ENST00000470094 RPL38P63173 70 aaKnown RBP0.76□□□□□ -2.29
BRCA2-202ENST00000470094 DEFB123Q8N688 67 aa0.76□□□□□ -2.29
BRCA2-202ENST00000470094 TP53AIP1Q9HCN2 124 aa0.76□□□□□ -2.29
BRCA2-202ENST00000470094 TENM3Q9P273 2699 aa0.76□□□□□ -2.29
BRCA2-202ENST00000470094 NAV3Q8IVL0 2385 aa0.76□□□□□ -2.29
BRCA2-202ENST00000470094 ZDBF2Q9HCK1 2354 aa0.76□□□□□ -2.29
BRCA2-202ENST00000470094 TIMM8BQ9Y5J9 83 aaPredicted RBP0.75□□□□□ -2.29
BRCA2-202ENST00000470094 CACNA1EQ15878 2313 aa0.75□□□□□ -2.29
BRCA2-202ENST00000470094 PLCE1Q9P212 2302 aa0.75□□□□□ -2.29
BRCA2-202ENST00000470094 DOPEY2Q9Y3R5 2298 aa0.75□□□□□ -2.29
BRCA2-202ENST00000470094 PIEZO2Q9H5I5 2752 aa0.74□□□□□ -2.29
BRCA2-202ENST00000470094 KNL1Q8NG31 2342 aa0.74□□□□□ -2.29
BRCA2-202ENST00000470094 SPTY2D1-AS1A0A0U1RR47 76 aa0.74□□□□□ -2.29
BRCA2-202ENST00000470094 LOC730098B7Z3J9 87 aa0.74□□□□□ -2.29
BRCA2-202ENST00000470094 IAPPP10997 89 aa0.74□□□□□ -2.29
BRCA2-202ENST00000470094 REV3LO60673 3130 aa0.74□□□□□ -2.29
BRCA2-202ENST00000470094 FAM208BQ5VWN6 2430 aa0.74□□□□□ -2.29
BRCA2-202ENST00000470094 PTPRZ1P23471 2315 aaPredicted RBP0.73□□□□□ -2.29
BRCA2-202ENST00000470094 TPRP12270 2363 aaKnown RBP0.73□□□□□ -2.29
BRCA2-202ENST00000470094 I3L2K1 104 aa0.73□□□□□ -2.29
BRCA2-202ENST00000470094 SSBP3-AS1Q7Z2R9 100 aa0.73□□□□□ -2.29
BRCA2-202ENST00000470094 PRO3102Q9H379 93 aa0.73□□□□□ -2.29
BRCA2-202ENST00000470094 CHD7Q9P2D1 2997 aa0.73□□□□□ -2.29
BRCA2-202ENST00000470094 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
BRCA2-202ENST00000470094 MEGF8Q7Z7M0 2845 aa0.72□□□□□ -2.29
BRCA2-202ENST00000470094 H0YAA0 97 aa0.72□□□□□ -2.29
BRCA2-202ENST00000470094 CRIPTQ9P021 101 aa0.72□□□□□ -2.29
BRCA2-202ENST00000470094 APCP25054 2843 aa0.72□□□□□ -2.29
BRCA2-202ENST00000470094 PKDREJQ9NTG1 2253 aa0.72□□□□□ -2.29
BRCA2-202ENST00000470094 WNK2Q9Y3S1 2297 aa0.72□□□□□ -2.29
BRCA2-202ENST00000470094 OTOGQ6ZRI0 2925 aa0.71□□□□□ -2.3
BRCA2-202ENST00000470094 CCL22O00626 93 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms