RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 C9orf153Q5TBE3 101 aa9.53□□□□□ -0.88
CBWD3-205ENST00000469687 COX7CP15954 63 aa9.53□□□□□ -0.88
CBWD3-205ENST00000469687 TRBV7-4A0A0J9YYF1 115 aa9.52□□□□□ -0.89
CBWD3-205ENST00000469687 RPL37AP8A6NKH3 93 aa9.51□□□□□ -0.89
CBWD3-205ENST00000469687 ATP5EP2Q5VTU8 51 aa9.51□□□□□ -0.89
CBWD3-205ENST00000469687 H3BQ85 93 aa9.51□□□□□ -0.89
CBWD3-205ENST00000469687 KCNQ1DNQ9H478 68 aa9.51□□□□□ -0.89
CBWD3-205ENST00000469687 TLX1NBP0CAT3 122 aa9.5□□□□□ -0.89
CBWD3-205ENST00000469687 Q6ZVQ6 151 aa9.5□□□□□ -0.89
CBWD3-205ENST00000469687 KRTAP7-1Q8IUC3 87 aa9.5□□□□□ -0.89
CBWD3-205ENST00000469687 STAB2Q8WWQ8 2551 aa9.5□□□□□ -0.89
CBWD3-205ENST00000469687 LINC01547P58512 204 aaPredicted RBP9.48□□□□□ -0.89
CBWD3-205ENST00000469687 UPK3BQ9BT76 320 aa9.48□□□□□ -0.89
CBWD3-205ENST00000469687 CYSTM1Q9H1C7 97 aa9.48□□□□□ -0.89
CBWD3-205ENST00000469687 HAMPP81172 84 aa9.48□□□□□ -0.89
CBWD3-205ENST00000469687 PDE6GP18545 87 aa9.47□□□□□ -0.89
CBWD3-205ENST00000469687 DNAH7Q8WXX0 4024 aa9.47□□□□□ -0.89
CBWD3-205ENST00000469687 DEFB105AQ8NG35 78 aa9.47□□□□□ -0.89
CBWD3-205ENST00000469687 GHRHP01286 108 aa9.46□□□□□ -0.9
CBWD3-205ENST00000469687 SERP2Q8N6R1 65 aa9.46□□□□□ -0.9
CBWD3-205ENST00000469687 KRTAP1-5Q9BYS1 174 aa9.46□□□□□ -0.9
CBWD3-205ENST00000469687 PLA2G2DQ9UNK4 145 aa9.46□□□□□ -0.9
CBWD3-205ENST00000469687 CSMD3Q7Z407 3707 aa9.45□□□□□ -0.9
CBWD3-205ENST00000469687 FAM19A5Q7Z5A7 132 aaPredicted RBP9.44□□□□□ -0.9
CBWD3-205ENST00000469687 Q9BRP9 147 aa9.44□□□□□ -0.9
CBWD3-205ENST00000469687 IGLV1-50A0A075B6I6 118 aa9.44□□□□□ -0.9
CBWD3-205ENST00000469687 KRTAP4-16G5E9R7 235 aaPredicted RBP9.44□□□□□ -0.9
CBWD3-205ENST00000469687 CRYGAP11844 174 aa9.44□□□□□ -0.9
CBWD3-205ENST00000469687 SCXQ7RTU7 201 aa9.44□□□□□ -0.9
CBWD3-205ENST00000469687 Q8N377 158 aa9.44□□□□□ -0.9
CBWD3-205ENST00000469687 RMI2Q96E14 147 aa9.44□□□□□ -0.9
CBWD3-205ENST00000469687 Q6ZRX8 168 aa9.43□□□□□ -0.9
CBWD3-205ENST00000469687 IGLV5-37A0A075B6J1 123 aa9.41□□□□□ -0.9
CBWD3-205ENST00000469687 PLECQ15149 4684 aaKnown RBP9.41□□□□□ -0.9
CBWD3-205ENST00000469687 TENM2Q9NT68 2774 aa9.41□□□□□ -0.9
CBWD3-205ENST00000469687 SPRR1AP35321 89 aa9.4□□□□□ -0.9
CBWD3-205ENST00000469687 SMIM20Q8N5G0 67 aa9.4□□□□□ -0.9
CBWD3-205ENST00000469687 ST20-AS1Q8NBB2 130 aa9.4□□□□□ -0.9
CBWD3-205ENST00000469687 PRYO14603 147 aa9.4□□□□□ -0.91
CBWD3-205ENST00000469687 MRPL55Q7Z7F7 128 aaKnown RBP9.4□□□□□ -0.91
CBWD3-205ENST00000469687 LOC107984640A0A0U1RRK4 108 aa9.39□□□□□ -0.91
CBWD3-205ENST00000469687 ETDCA0A1B0GVM5 59 aa9.39□□□□□ -0.91
CBWD3-205ENST00000469687 CXCL6P80162 114 aa9.39□□□□□ -0.91
CBWD3-205ENST00000469687 ERC2-IT1O76042 136 aa9.38□□□□□ -0.91
CBWD3-205ENST00000469687 DYNC2H1Q8NCM8 4307 aaKnown RBP9.38□□□□□ -0.91
CBWD3-205ENST00000469687 C3orf84H3BNL1 204 aa9.37□□□□□ -0.91
CBWD3-205ENST00000469687 DHRS4-AS1Q9P1J3 65 aa9.37□□□□□ -0.91
CBWD3-205ENST00000469687 IGLV5-48A0A075B6I7 105 aa9.35□□□□□ -0.91
CBWD3-205ENST00000469687 A0A096LNI7 61 aa9.35□□□□□ -0.91
CBWD3-205ENST00000469687 IGKV2-24A0A0C4DH68 120 aa9.35□□□□□ -0.91
CBWD3-205ENST00000469687 Q8N9L7 120 aa9.34□□□□□ -0.91
CBWD3-205ENST00000469687 MDFIQ99750 246 aa9.33□□□□□ -0.92
CBWD3-205ENST00000469687 APLNQ9ULZ1 77 aa9.33□□□□□ -0.92
CBWD3-205ENST00000469687 UBE2BP63146 152 aa9.33□□□□□ -0.92
CBWD3-205ENST00000469687 UBE2DNLQ8IWF7 75 aa9.33□□□□□ -0.92
CBWD3-205ENST00000469687 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.32□□□□□ -0.92
CBWD3-205ENST00000469687 A0A1W2PNN7 141 aa9.32□□□□□ -0.92
CBWD3-205ENST00000469687 PSCAO43653 123 aa9.32□□□□□ -0.92
CBWD3-205ENST00000469687 TNP2Q05952 138 aa9.31□□□□□ -0.92
CBWD3-205ENST00000469687 REG3GQ6UW15 175 aa9.31□□□□□ -0.92
CBWD3-205ENST00000469687 A0A1W2PNM2 257 aa9.31□□□□□ -0.92
CBWD3-205ENST00000469687 NREPQ16612 68 aa9.3□□□□□ -0.92
CBWD3-205ENST00000469687 C20orf197Q8N268 126 aa9.3□□□□□ -0.92
CBWD3-205ENST00000469687 C16orf90A8MZG2 172 aa9.29□□□□□ -0.92
CBWD3-205ENST00000469687 CNBPP62633 177 aaKnown RBP9.29□□□□□ -0.92
CBWD3-205ENST00000469687 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
CBWD3-205ENST00000469687 STARD9Q9P2P6 4700 aa9.28□□□□□ -0.92
CBWD3-205ENST00000469687 BPY2O14599 106 aa9.28□□□□□ -0.92
CBWD3-205ENST00000469687 CHTF8P0CG12 524 aa9.28□□□□□ -0.92
CBWD3-205ENST00000469687 PRLHP81277 87 aa9.27□□□□□ -0.92
CBWD3-205ENST00000469687 TRAV7A0A075B6U4 112 aa9.27□□□□□ -0.93
CBWD3-205ENST00000469687 IGKV4-1P06312 121 aa9.27□□□□□ -0.93
CBWD3-205ENST00000469687 SRRM2Q9UQ35 2752 aaKnown RBP9.26□□□□□ -0.93
CBWD3-205ENST00000469687 A0A0G2JQZ4 141 aa9.26□□□□□ -0.93
CBWD3-205ENST00000469687 SMIM29Q86T20 159 aa9.26□□□□□ -0.93
CBWD3-205ENST00000469687 KRTAP11-1Q8IUC1 163 aa9.26□□□□□ -0.93
CBWD3-205ENST00000469687 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
CBWD3-205ENST00000469687 B9D2Q9BPU9 175 aa9.25□□□□□ -0.93
CBWD3-205ENST00000469687 BCE1O60756 84 aa9.24□□□□□ -0.93
CBWD3-205ENST00000469687 TMEM258P61165 79 aa9.24□□□□□ -0.93
CBWD3-205ENST00000469687 Q8NBF4 154 aa9.23□□□□□ -0.93
CBWD3-205ENST00000469687 PRKDCP78527 4128 aaKnown RBP9.23□□□□□ -0.93
CBWD3-205ENST00000469687 PHF5AQ7RTV0 110 aaKnown RBP9.23□□□□□ -0.93
CBWD3-205ENST00000469687 HIGD2AQ9BW72 106 aa9.22□□□□□ -0.93
CBWD3-205ENST00000469687 SNURFQ9Y675 71 aa9.22□□□□□ -0.93
CBWD3-205ENST00000469687 LINC00476Q8WZB0 136 aa9.21□□□□□ -0.94
CBWD3-205ENST00000469687 LRCOL1A6NCL2 159 aa9.2□□□□□ -0.94
CBWD3-205ENST00000469687 SPRR4Q96PI1 79 aa9.2□□□□□ -0.94
CBWD3-205ENST00000469687 DPH3Q96FX2 82 aa9.19□□□□□ -0.94
CBWD3-205ENST00000469687 VPS13DQ5THJ4 4388 aa9.19□□□□□ -0.94
CBWD3-205ENST00000469687 NBDYA0A0U1RRE5 68 aa9.18□□□□□ -0.94
CBWD3-205ENST00000469687 J3KT08 172 aa9.18□□□□□ -0.94
CBWD3-205ENST00000469687 C14orf177Q52M58 125 aa9.18□□□□□ -0.94
CBWD3-205ENST00000469687 H7BZZ5 65 aa9.17□□□□□ -0.94
CBWD3-205ENST00000469687 PANO1I0J062 215 aa9.17□□□□□ -0.94
CBWD3-205ENST00000469687 IGFL1Q6UW32 110 aa9.17□□□□□ -0.94
CBWD3-205ENST00000469687 OXTP01178 125 aa9.16□□□□□ -0.94
CBWD3-205ENST00000469687 KLKP1Q107X0 134 aa9.16□□□□□ -0.94
CBWD3-205ENST00000469687 Q6ZRN7 208 aaPredicted RBP9.16□□□□□ -0.94
CBWD3-205ENST00000469687 C9orf163Q8N9P6 203 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms