RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 C9orf163Q8N9P6 203 aa4.62□□□□□ -1.67
CD46-212ENST00000469535 C9orf129Q5T035 196 aaKnown RBP4.62□□□□□ -1.67
CD46-212ENST00000469535 H3BPC8 53 aa4.61□□□□□ -1.67
CD46-212ENST00000469535 Q6ZSA8 131 aa4.61□□□□□ -1.67
CD46-212ENST00000469535 SETD2Q9BYW2 2564 aaPredicted RBP4.61□□□□□ -1.67
CD46-212ENST00000469535 F8P00451 2351 aa4.61□□□□□ -1.67
CD46-212ENST00000469535 C8orf17Q9NRJ1 99 aa4.61□□□□□ -1.67
CD46-212ENST00000469535 KCNQ1DNQ9H478 68 aa4.6□□□□□ -1.67
CD46-212ENST00000469535 ZNF575Q86XF7 245 aa4.6□□□□□ -1.67
CD46-212ENST00000469535 A0A1B0GVX0 72 aa4.59□□□□□ -1.67
CD46-212ENST00000469535 KRTAP1-3Q8IUG1 177 aa4.59□□□□□ -1.67
CD46-212ENST00000469535 CEP295Q9C0D2 2601 aa4.59□□□□□ -1.67
CD46-212ENST00000469535 POLQO75417 2590 aa4.59□□□□□ -1.68
CD46-212ENST00000469535 A0A0D9SG42 100 aa4.59□□□□□ -1.68
CD46-212ENST00000469535 IGLV7-46A0A075B6I9 117 aa4.58□□□□□ -1.68
CD46-212ENST00000469535 GIG44P09565 113 aaPredicted RBP4.58□□□□□ -1.68
CD46-212ENST00000469535 ACANP16112 2415 aa4.57□□□□□ -1.68
CD46-212ENST00000469535 PRR34Q9NV39 138 aa4.57□□□□□ -1.68
CD46-212ENST00000469535 MTORP42345 2549 aa4.57□□□□□ -1.68
CD46-212ENST00000469535 CENPFP49454 3210 aa4.56□□□□□ -1.68
CD46-212ENST00000469535 Q8N1X5 172 aa4.56□□□□□ -1.68
CD46-212ENST00000469535 LINC00612Q8N6U2 182 aa4.56□□□□□ -1.68
CD46-212ENST00000469535 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
CD46-212ENST00000469535 KRTAP1-1Q07627 177 aa4.56□□□□□ -1.68
CD46-212ENST00000469535 PKD1L2Q7Z442 2459 aa4.56□□□□□ -1.68
CD46-212ENST00000469535 COA5Q86WW8 74 aa4.56□□□□□ -1.68
CD46-212ENST00000469535 PRR26Q8N8Z3 221 aa4.56□□□□□ -1.68
CD46-212ENST00000469535 SPRR4Q96PI1 79 aa4.56□□□□□ -1.68
CD46-212ENST00000469535 IGLV5-48A0A075B6I7 105 aa4.55□□□□□ -1.68
CD46-212ENST00000469535 USP9YO00507 2555 aaPredicted RBP4.55□□□□□ -1.68
CD46-212ENST00000469535 PRR15Q8IV56 129 aa4.55□□□□□ -1.68
CD46-212ENST00000469535 Q8N377 158 aa4.55□□□□□ -1.68
CD46-212ENST00000469535 SMCPP49901 116 aaPredicted RBP4.54□□□□□ -1.68
CD46-212ENST00000469535 TLX1NBP0CAT3 122 aa4.54□□□□□ -1.68
CD46-212ENST00000469535 CNBPP62633 177 aaKnown RBP4.53□□□□□ -1.68
CD46-212ENST00000469535 LITAFQ99732 161 aa4.53□□□□□ -1.68
CD46-212ENST00000469535 KLK9Q2XQG4 91 aa4.53□□□□□ -1.68
CD46-212ENST00000469535 ERC2-IT1O76042 136 aa4.52□□□□□ -1.69
CD46-212ENST00000469535 UQCR11O14957 56 aa4.52□□□□□ -1.69
CD46-212ENST00000469535 PLA2G2DQ9UNK4 145 aa4.52□□□□□ -1.69
CD46-212ENST00000469535 MIR22HGQ0VDD5 57 aa4.5□□□□□ -1.69
CD46-212ENST00000469535 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.5□□□□□ -1.69
CD46-212ENST00000469535 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
CD46-212ENST00000469535 C4orf26Q17RF5 130 aa4.49□□□□□ -1.69
CD46-212ENST00000469535 EIF4EBP3O60516 100 aaPredicted RBP4.48□□□□□ -1.69
CD46-212ENST00000469535 Q5VSD8 79 aa4.48□□□□□ -1.69
CD46-212ENST00000469535 A8MUN3 132 aa4.47□□□□□ -1.69
CD46-212ENST00000469535 GOLGB1Q14789 3259 aaKnown RBP4.47□□□□□ -1.69
CD46-212ENST00000469535 PRO0461Q9UI25 63 aa4.46□□□□□ -1.69
CD46-212ENST00000469535 FAM104AQ969W3 186 aa4.46□□□□□ -1.7
CD46-212ENST00000469535 HECTD1Q9ULT8 2610 aa4.45□□□□□ -1.7
CD46-212ENST00000469535 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
CD46-212ENST00000469535 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
CD46-212ENST00000469535 A0A1W2PNM2 257 aa4.42□□□□□ -1.7
CD46-212ENST00000469535 EPG5Q9HCE0 2579 aa4.42□□□□□ -1.7
CD46-212ENST00000469535 LCE6AA0A183 80 aa4.41□□□□□ -1.7
CD46-212ENST00000469535 FLNBO75369 2602 aaKnown RBP4.41□□□□□ -1.7
CD46-212ENST00000469535 S4R3F8 94 aa4.4□□□□□ -1.7
CD46-212ENST00000469535 CD164Q04900 197 aa4.4□□□□□ -1.71
CD46-212ENST00000469535 SEC61BP60468 96 aaKnown RBP4.4□□□□□ -1.71
CD46-212ENST00000469535 CYP4F30PQ9H0H9 118 aa4.39□□□□□ -1.71
CD46-212ENST00000469535 MGAM2Q2M2H8 2515 aa4.39□□□□□ -1.71
CD46-212ENST00000469535 USP24Q9UPU5 2620 aa4.39□□□□□ -1.71
CD46-212ENST00000469535 LINC00483Q53H64 154 aa4.38□□□□□ -1.71
CD46-212ENST00000469535 PLAC8Q9NZF1 115 aa4.38□□□□□ -1.71
CD46-212ENST00000469535 FAM229BQ4G0N7 80 aa4.38□□□□□ -1.71
CD46-212ENST00000469535 CSAG1Q6PB30 78 aa4.37□□□□□ -1.71
CD46-212ENST00000469535 HRES1P13985 223 aa4.37□□□□□ -1.71
CD46-212ENST00000469535 ZCCHC13Q8WW36 166 aaKnown RBP4.35□□□□□ -1.71
CD46-212ENST00000469535 KRTAP10-1P60331 282 aa4.35□□□□□ -1.71
CD46-212ENST00000469535 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
CD46-212ENST00000469535 KRTAP10-2P60368 255 aa4.34□□□□□ -1.71
CD46-212ENST00000469535 RPS28P62857 69 aaKnown RBP4.34□□□□□ -1.71
CD46-212ENST00000469535 CR1P17927 2039 aa4.33□□□□□ -1.72
CD46-212ENST00000469535 R4GN34 69 aa4.32□□□□□ -1.72
CD46-212ENST00000469535 A0A1B0GU33 70 aa4.32□□□□□ -1.72
CD46-212ENST00000469535 BPTFQ12830 3046 aa4.32□□□□□ -1.72
CD46-212ENST00000469535 WIPF1O43516 503 aa4.31□□□□□ -1.72
CD46-212ENST00000469535 KLKP1Q107X0 134 aa4.3□□□□□ -1.72
CD46-212ENST00000469535 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
CD46-212ENST00000469535 SPINK7P58062 85 aa4.3□□□□□ -1.72
CD46-212ENST00000469535 OXTP01178 125 aa4.29□□□□□ -1.72
CD46-212ENST00000469535 SPANXA2-OT1Q8N9U9 137 aa4.29□□□□□ -1.72
CD46-212ENST00000469535 Q1T7F1 81 aa4.28□□□□□ -1.72
CD46-212ENST00000469535 Q8N9P0 234 aaPredicted RBP4.28□□□□□ -1.72
CD46-212ENST00000469535 PLAC4Q8WY50 150 aa4.28□□□□□ -1.72
CD46-212ENST00000469535 H7BZZ5 65 aa4.28□□□□□ -1.72
CD46-212ENST00000469535 HELZ2Q9BYK8 2649 aaKnown RBP4.26□□□□□ -1.73
CD46-212ENST00000469535 FLNAP21333 2647 aaKnown RBP4.26□□□□□ -1.73
CD46-212ENST00000469535 LCA10Q71F78 164 aa4.26□□□□□ -1.73
CD46-212ENST00000469535 UTRNP46939 3433 aa4.26□□□□□ -1.73
CD46-212ENST00000469535 ITPR3Q14573 2671 aa4.25□□□□□ -1.73
CD46-212ENST00000469535 MMP24-AS1A0A0U1RRL7 71 aa4.24□□□□□ -1.73
CD46-212ENST00000469535 M0QZ58 72 aa4.24□□□□□ -1.73
CD46-212ENST00000469535 Q5W150 140 aa4.24□□□□□ -1.73
CD46-212ENST00000469535 DNAH12Q6ZR08 3092 aa4.24□□□□□ -1.73
CD46-212ENST00000469535 DMAC1Q96GE9 116 aa4.23□□□□□ -1.73
CD46-212ENST00000469535 ATRQ13535 2644 aa4.23□□□□□ -1.73
CD46-212ENST00000469535 MAST4O15021 2626 aa4.22□□□□□ -1.73
CD46-212ENST00000469535 Q8NDZ9 215 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms