RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 TRBV10-3A0A0K0K1G6 114 aa2.68□□□□□ -1.98
PTPN4-209ENST00000469511 ETDCA0A1B0GVM5 59 aa2.68□□□□□ -1.98
PTPN4-209ENST00000469511 PPBPP02775 128 aa2.68□□□□□ -1.98
PTPN4-209ENST00000469511 SEC11AP67812 179 aa2.68□□□□□ -1.98
PTPN4-209ENST00000469511 ADIRFQ15847 76 aa2.68□□□□□ -1.98
PTPN4-209ENST00000469511 KRTAP20-1Q3LI63 56 aa2.68□□□□□ -1.98
PTPN4-209ENST00000469511 KCNQ1DNQ9H478 68 aa2.68□□□□□ -1.98
PTPN4-209ENST00000469511 MAP1LC3AQ9H492 121 aa2.68□□□□□ -1.98
PTPN4-209ENST00000469511 CST9LQ9H4G1 147 aa2.68□□□□□ -1.98
PTPN4-209ENST00000469511 A0A0G2JQZ4 141 aa2.67□□□□□ -1.98
PTPN4-209ENST00000469511 A0A1B0GW15 77 aa2.67□□□□□ -1.98
PTPN4-209ENST00000469511 F8W036 122 aa2.67□□□□□ -1.98
PTPN4-209ENST00000469511 H7C2G1 150 aa2.67□□□□□ -1.98
PTPN4-209ENST00000469511 KRTAP10-10P60014 251 aa2.67□□□□□ -1.98
PTPN4-209ENST00000469511 ALKAL2Q6UX46 152 aa2.67□□□□□ -1.98
PTPN4-209ENST00000469511 TOMM6Q96B49 74 aa2.67□□□□□ -1.98
PTPN4-209ENST00000469511 ZNF22P17026 224 aaPredicted RBP2.66□□□□□ -1.98
PTPN4-209ENST00000469511 ORMDL2Q53FV1 153 aa2.66□□□□□ -1.98
PTPN4-209ENST00000469511 C1orf195Q5TG92 126 aa2.66□□□□□ -1.98
PTPN4-209ENST00000469511 ERASQ7Z444 233 aa2.66□□□□□ -1.98
PTPN4-209ENST00000469511 SCGB3A1Q96QR1 104 aa2.66□□□□□ -1.98
PTPN4-209ENST00000469511 LINC00158P58513 81 aa2.65□□□□□ -1.99
PTPN4-209ENST00000469511 COX17Q14061 63 aa2.65□□□□□ -1.99
PTPN4-209ENST00000469511 SLC51BQ86UW2 128 aa2.65□□□□□ -1.99
PTPN4-209ENST00000469511 BOD1L2Q8IYS8 172 aa2.65□□□□□ -1.99
PTPN4-209ENST00000469511 S100A8P05109 93 aa2.64□□□□□ -1.99
PTPN4-209ENST00000469511 SMIM13P0DJ93 91 aa2.64□□□□□ -1.99
PTPN4-209ENST00000469511 PMVKQ15126 192 aa2.64□□□□□ -1.99
PTPN4-209ENST00000469511 NAT8Q9UHE5 227 aa2.64□□□□□ -1.99
PTPN4-209ENST00000469511 TRAV9-1A0A075B6T8 112 aa2.63□□□□□ -1.99
PTPN4-209ENST00000469511 IGLC3P0DOY3 106 aa2.63□□□□□ -1.99
PTPN4-209ENST00000469511 Q6ZRX8 168 aa2.63□□□□□ -1.99
PTPN4-209ENST00000469511 LIMD2Q9BT23 127 aa2.63□□□□□ -1.99
PTPN4-209ENST00000469511 NXT2Q9NPJ8 142 aaKnown RBP2.63□□□□□ -1.99
PTPN4-209ENST00000469511 LAMTOR2Q9Y2Q5 125 aa2.63□□□□□ -1.99
PTPN4-209ENST00000469511 C11orf86A6NJI1 115 aa2.62□□□□□ -1.99
PTPN4-209ENST00000469511 H3BRM9 83 aa2.62□□□□□ -1.99
PTPN4-209ENST00000469511 RGS21Q2M5E4 152 aa2.62□□□□□ -1.99
PTPN4-209ENST00000469511 MIR7-3HGQ8N6C7 128 aa2.62□□□□□ -1.99
PTPN4-209ENST00000469511 A0A096LNJ9 63 aa2.61□□□□□ -1.99
PTPN4-209ENST00000469511 C20orf202A1L168 122 aa2.61□□□□□ -1.99
PTPN4-209ENST00000469511 K7EMI3 77 aa2.61□□□□□ -1.99
PTPN4-209ENST00000469511 NDUFA6P56556 154 aa2.61□□□□□ -1.99
PTPN4-209ENST00000469511 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
PTPN4-209ENST00000469511 ATP5L2Q7Z4Y8 100 aa2.61□□□□□ -1.99
PTPN4-209ENST00000469511 SPRR1BP22528 89 aa2.6□□□□□ -1.99
PTPN4-209ENST00000469511 DDTP30046 118 aa2.6□□□□□ -1.99
PTPN4-209ENST00000469511 Q1RN00 199 aa2.6□□□□□ -1.99
PTPN4-209ENST00000469511 LINC00846Q9NV44 126 aa2.6□□□□□ -1.99
PTPN4-209ENST00000469511 KMT2DO14686 5537 aa2.59□□□□□ -1.99
PTPN4-209ENST00000469511 LINC01546A6NGU7 62 aa2.59□□□□□ -1.99
PTPN4-209ENST00000469511 LGALS3P17931 250 aaKnown RBP2.59□□□□□ -1.99
PTPN4-209ENST00000469511 TMEM170BQ5T4T1 132 aa2.59□□□□□ -1.99
PTPN4-209ENST00000469511 CD164Q04900 197 aa2.58□□□□□ -2
PTPN4-209ENST00000469511 PMCHL1Q16048 86 aa2.58□□□□□ -2
PTPN4-209ENST00000469511 MEIG1Q5JSS6 88 aa2.58□□□□□ -2
PTPN4-209ENST00000469511 Q5XG85 94 aa2.58□□□□□ -2
PTPN4-209ENST00000469511 ATP11AUNQ6ZP68 121 aa2.58□□□□□ -2
PTPN4-209ENST00000469511 TCTE3Q8IZS6 198 aa2.58□□□□□ -2
PTPN4-209ENST00000469511 OBSCN-AS1Q96MR7 158 aa2.58□□□□□ -2
PTPN4-209ENST00000469511 C20orf166-AS1Q96NR2 134 aa2.58□□□□□ -2
PTPN4-209ENST00000469511 TMEM223A0PJW6 202 aa2.57□□□□□ -2
PTPN4-209ENST00000469511 G0S2P27469 103 aa2.57□□□□□ -2
PTPN4-209ENST00000469511 SOSTDC1Q6X4U4 206 aa2.57□□□□□ -2
PTPN4-209ENST00000469511 BAGE3Q86Y29 109 aa2.57□□□□□ -2
PTPN4-209ENST00000469511 DEFB105AQ8NG35 78 aa2.57□□□□□ -2
PTPN4-209ENST00000469511 RPS10P5Q9NQ39 176 aa2.57□□□□□ -2
PTPN4-209ENST00000469511 DHRS4-AS1Q9P1J3 65 aa2.57□□□□□ -2
PTPN4-209ENST00000469511 TRAV23DV6A0A075B6W5 121 aa2.56□□□□□ -2
PTPN4-209ENST00000469511 ZNF73O43830 326 aaPredicted RBP2.56□□□□□ -2
PTPN4-209ENST00000469511 DSCR10P59022 87 aa2.56□□□□□ -2
PTPN4-209ENST00000469511 TSPEAR-AS2P59090 65 aa2.56□□□□□ -2
PTPN4-209ENST00000469511 PCP2Q8IVA1 136 aa2.56□□□□□ -2
PTPN4-209ENST00000469511 PRO1933Q9H354 126 aa2.56□□□□□ -2
PTPN4-209ENST00000469511 LAMTOR3Q9UHA4 124 aa2.56□□□□□ -2
PTPN4-209ENST00000469511 MDN1Q9NU22 5596 aa2.56□□□□□ -2
PTPN4-209ENST00000469511 LOC107984156A0A0G2JMH3 177 aa2.55□□□□□ -2
PTPN4-209ENST00000469511 TRBV10-2A0A0K0K1G8 114 aa2.55□□□□□ -2
PTPN4-209ENST00000469511 NPC2P61916 151 aa2.55□□□□□ -2
PTPN4-209ENST00000469511 JOSD1Q15040 202 aaPredicted RBP2.55□□□□□ -2
PTPN4-209ENST00000469511 S100A7L2Q5SY68 101 aa2.55□□□□□ -2
PTPN4-209ENST00000469511 ARL17AQ8IVW1 177 aa2.55□□□□□ -2
PTPN4-209ENST00000469511 AKR1D1P51857 326 aa2.54□□□□□ -2
PTPN4-209ENST00000469511 S100A12P80511 92 aa2.54□□□□□ -2
PTPN4-209ENST00000469511 PEA15Q15121 130 aa2.54□□□□□ -2
PTPN4-209ENST00000469511 SFTA2Q6UW10 78 aa2.54□□□□□ -2
PTPN4-209ENST00000469511 TRBV20-1A0A075B6N2 111 aa2.53□□□□□ -2
PTPN4-209ENST00000469511 FAM236DA0A1B0GTK5 79 aa2.53□□□□□ -2
PTPN4-209ENST00000469511 KRTAP2-3P0C7H8 128 aa2.53□□□□□ -2
PTPN4-209ENST00000469511 FAM236CP0DP71 79 aa2.53□□□□□ -2
PTPN4-209ENST00000469511 HRES1P13985 223 aa2.53□□□□□ -2
PTPN4-209ENST00000469511 TAL2Q16559 108 aa2.53□□□□□ -2
PTPN4-209ENST00000469511 FA2HQ7L5A8 372 aa2.53□□□□□ -2
PTPN4-209ENST00000469511 Q96NJ1 140 aa2.53□□□□□ -2
PTPN4-209ENST00000469511 KRTAP2-4Q9BYR9 128 aa2.53□□□□□ -2
PTPN4-209ENST00000469511 SPANXB1Q9NS25 103 aaPredicted RBP2.53□□□□□ -2
PTPN4-209ENST00000469511 LINC01549A6NIU2 74 aa2.52□□□□□ -2.01
PTPN4-209ENST00000469511 HBDP02042 147 aa2.52□□□□□ -2.01
PTPN4-209ENST00000469511 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
PTPN4-209ENST00000469511 KRTAP10-12P60413 245 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms