RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 A0A087WYN8 130 aa5.12□□□□□ -1.59
NPHP3-204ENST00000469232 LBHQ53QV2 105 aaPredicted RBP5.12□□□□□ -1.59
NPHP3-204ENST00000469232 C7orf33Q8WU49 177 aa5.12□□□□□ -1.59
NPHP3-204ENST00000469232 TMEM126AQ9H061 195 aa5.12□□□□□ -1.59
NPHP3-204ENST00000469232 MRPL55Q7Z7F7 128 aaKnown RBP5.11□□□□□ -1.59
NPHP3-204ENST00000469232 KCNQ1DNQ9H478 68 aa5.11□□□□□ -1.59
NPHP3-204ENST00000469232 IGLV1-50A0A075B6I6 118 aa5.1□□□□□ -1.59
NPHP3-204ENST00000469232 TRBV10-3A0A0K0K1G6 114 aa5.1□□□□□ -1.59
NPHP3-204ENST00000469232 K7ERJ3 54 aa5.1□□□□□ -1.59
NPHP3-204ENST00000469232 TAX1BP3O14907 124 aa5.1□□□□□ -1.59
NPHP3-204ENST00000469232 SPRR1AP35321 89 aa5.1□□□□□ -1.59
NPHP3-204ENST00000469232 COL5A1-AS1Q5SY13 56 aa5.1□□□□□ -1.59
NPHP3-204ENST00000469232 LINC00167Q96N53 147 aa5.1□□□□□ -1.59
NPHP3-204ENST00000469232 KRTAP4-16G5E9R7 235 aaPredicted RBP5.09□□□□□ -1.59
NPHP3-204ENST00000469232 M0QXV9 152 aa5.09□□□□□ -1.59
NPHP3-204ENST00000469232 NCR3O14931 201 aa5.09□□□□□ -1.59
NPHP3-204ENST00000469232 RPL28P46779 137 aaKnown RBP5.09□□□□□ -1.59
NPHP3-204ENST00000469232 FAM19A5Q7Z5A7 132 aaPredicted RBP5.09□□□□□ -1.59
NPHP3-204ENST00000469232 NKAPP1Q8N9T2 125 aa5.09□□□□□ -1.59
NPHP3-204ENST00000469232 RAB37Q96AX2 223 aa5.09□□□□□ -1.59
NPHP3-204ENST00000469232 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
NPHP3-204ENST00000469232 CBY1Q9Y3M2 126 aa5.09□□□□□ -1.59
NPHP3-204ENST00000469232 TRBV7-6A0A0J9YX20 115 aa5.08□□□□□ -1.6
NPHP3-204ENST00000469232 TSPAN13O95857 204 aa5.08□□□□□ -1.6
NPHP3-204ENST00000469232 RPL13AP40429 203 aaKnown RBP5.08□□□□□ -1.6
NPHP3-204ENST00000469232 CIRBP-AS1Q8TBR5 109 aa5.08□□□□□ -1.6
NPHP3-204ENST00000469232 PRYO14603 147 aa5.08□□□□□ -1.6
NPHP3-204ENST00000469232 XGP55808 180 aa5.08□□□□□ -1.6
NPHP3-204ENST00000469232 BATFQ16520 125 aa5.08□□□□□ -1.6
NPHP3-204ENST00000469232 SCXQ7RTU7 201 aa5.08□□□□□ -1.6
NPHP3-204ENST00000469232 KRTAP11-1Q8IUC1 163 aa5.08□□□□□ -1.6
NPHP3-204ENST00000469232 SMIM11BQ8TCY0 68 aa5.08□□□□□ -1.6
NPHP3-204ENST00000469232 PHF5AQ7RTV0 110 aaKnown RBP5.07□□□□□ -1.6
NPHP3-204ENST00000469232 S100A7L2Q5SY68 101 aa5.06□□□□□ -1.6
NPHP3-204ENST00000469232 TRAV23DV6A0A075B6W5 121 aa5.05□□□□□ -1.6
NPHP3-204ENST00000469232 OR13C6PQ8NH95 151 aa5.05□□□□□ -1.6
NPHP3-204ENST00000469232 H0Y9J4 135 aa5.05□□□□□ -1.6
NPHP3-204ENST00000469232 TRIAP1O43715 76 aa5.05□□□□□ -1.6
NPHP3-204ENST00000469232 ZNF73O43830 326 aaPredicted RBP5.05□□□□□ -1.6
NPHP3-204ENST00000469232 KRTAP13-1Q8IUC0 172 aa5.05□□□□□ -1.6
NPHP3-204ENST00000469232 GAGE10A6NGK3 116 aa5.04□□□□□ -1.6
NPHP3-204ENST00000469232 RPL37AP8A6NKH3 93 aa5.04□□□□□ -1.6
NPHP3-204ENST00000469232 CDK2AP2O75956 126 aa5.04□□□□□ -1.6
NPHP3-204ENST00000469232 ELOF1P60002 83 aaKnown RBP5.04□□□□□ -1.6
NPHP3-204ENST00000469232 C6orf99Q4VX62 202 aa5.04□□□□□ -1.6
NPHP3-204ENST00000469232 FAT1Q14517 4588 aa5.04□□□□□ -1.6
NPHP3-204ENST00000469232 EPPK1P58107 5090 aaKnown RBP5.03□□□□□ -1.6
NPHP3-204ENST00000469232 HSPG2P98160 4391 aa5.03□□□□□ -1.6
NPHP3-204ENST00000469232 B5MCH6 92 aa5.03□□□□□ -1.6
NPHP3-204ENST00000469232 H0YGX0 51 aa5.03□□□□□ -1.6
NPHP3-204ENST00000469232 REG3GQ6UW15 175 aa5.03□□□□□ -1.6
NPHP3-204ENST00000469232 DIRC1Q969H9 104 aa5.03□□□□□ -1.6
NPHP3-204ENST00000469232 DPH3Q96FX2 82 aa5.03□□□□□ -1.6
NPHP3-204ENST00000469232 A0A1B0GX51 115 aa5.02□□□□□ -1.61
NPHP3-204ENST00000469232 A0A1W2PPM0 123 aa5.02□□□□□ -1.61
NPHP3-204ENST00000469232 H3BUT2 72 aa5.02□□□□□ -1.61
NPHP3-204ENST00000469232 BCE1O60756 84 aa5.02□□□□□ -1.61
NPHP3-204ENST00000469232 INAFM2P0DMQ5 153 aa5.02□□□□□ -1.61
NPHP3-204ENST00000469232 PSORS1C2Q9UIG4 136 aa5.02□□□□□ -1.61
NPHP3-204ENST00000469232 RYR1P21817 5038 aa5.02□□□□□ -1.61
NPHP3-204ENST00000469232 H7C2G1 150 aa5.01□□□□□ -1.61
NPHP3-204ENST00000469232 Q6ZRX8 168 aa5.01□□□□□ -1.61
NPHP3-204ENST00000469232 COX6CP09669 75 aa5.01□□□□□ -1.61
NPHP3-204ENST00000469232 KRTAP10-4P60372 401 aaPredicted RBP5.01□□□□□ -1.61
NPHP3-204ENST00000469232 UBE2BP63146 152 aa5.01□□□□□ -1.61
NPHP3-204ENST00000469232 VAMP3Q15836 100 aa5.01□□□□□ -1.61
NPHP3-204ENST00000469232 Q1RN00 199 aa5.01□□□□□ -1.61
NPHP3-204ENST00000469232 LYRM7Q5U5X0 104 aa5.01□□□□□ -1.61
NPHP3-204ENST00000469232 LINC00575Q6W349 94 aa5.01□□□□□ -1.61
NPHP3-204ENST00000469232 VPS13BQ7Z7G8 4022 aa5□□□□□ -1.61
NPHP3-204ENST00000469232 TRBV20-1A0A075B6N2 111 aa5□□□□□ -1.61
NPHP3-204ENST00000469232 LST1O00453 97 aa5□□□□□ -1.61
NPHP3-204ENST00000469232 COX7BP24311 80 aa5□□□□□ -1.61
NPHP3-204ENST00000469232 FAM218AQ96MZ4 157 aa5□□□□□ -1.61
NPHP3-204ENST00000469232 NAA38Q9BRA0 125 aaKnown RBP5□□□□□ -1.61
NPHP3-204ENST00000469232 Q9BRP9 147 aa5□□□□□ -1.61
NPHP3-204ENST00000469232 TRACP01848 142 aa4.99□□□□□ -1.61
NPHP3-204ENST00000469232 ETDCA0A1B0GVM5 59 aa4.98□□□□□ -1.61
NPHP3-204ENST00000469232 FABP2P12104 132 aa4.98□□□□□ -1.61
NPHP3-204ENST00000469232 PSMB2P49721 201 aa4.98□□□□□ -1.61
NPHP3-204ENST00000469232 HAMPP81172 84 aa4.98□□□□□ -1.61
NPHP3-204ENST00000469232 SMCR5Q8TEV8 140 aa4.98□□□□□ -1.61
NPHP3-204ENST00000469232 LINC01600Q96MT4 127 aa4.98□□□□□ -1.61
NPHP3-204ENST00000469232 DHRS4-AS1Q9P1J3 65 aa4.98□□□□□ -1.61
NPHP3-204ENST00000469232 KIAA1109Q2LD37 5005 aa4.98□□□□□ -1.61
NPHP3-204ENST00000469232 TCL1BO95988 128 aa4.97□□□□□ -1.61
NPHP3-204ENST00000469232 K7EP34 96 aa4.97□□□□□ -1.61
NPHP3-204ENST00000469232 ZNF861PO60384 105 aa4.97□□□□□ -1.61
NPHP3-204ENST00000469232 IGLV7-43P04211 117 aa4.97□□□□□ -1.61
NPHP3-204ENST00000469232 CLEC2BQ92478 149 aa4.97□□□□□ -1.61
NPHP3-204ENST00000469232 SRRM2Q9UQ35 2752 aaKnown RBP4.96□□□□□ -1.62
NPHP3-204ENST00000469232 SCGB1C2P0DMR2 95 aa4.96□□□□□ -1.62
NPHP3-204ENST00000469232 C1orf137Q5JT78 98 aa4.96□□□□□ -1.62
NPHP3-204ENST00000469232 FAM19A1Q7Z5A9 133 aa4.96□□□□□ -1.62
NPHP3-204ENST00000469232 SPCS1Q9Y6A9 102 aa4.96□□□□□ -1.62
NPHP3-204ENST00000469232 PKHD1L1Q86WI1 4243 aa4.95□□□□□ -1.62
NPHP3-204ENST00000469232 IGLV5-48A0A075B6I7 105 aa4.95□□□□□ -1.62
NPHP3-204ENST00000469232 hADV29S1A0JD25 119 aa4.95□□□□□ -1.62
NPHP3-204ENST00000469232 ERC2-IT1O76042 136 aa4.95□□□□□ -1.62
NPHP3-204ENST00000469232 LINC01547P58512 204 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms