RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 M0R2N4 97 aa6.84□□□□□ -1.31
NUP50-214ENST00000469163 Q8N9L7 120 aa6.84□□□□□ -1.31
NUP50-214ENST00000469163 PRR15LQ9BU68 103 aa6.84□□□□□ -1.31
NUP50-214ENST00000469163 IGKV2-28A0A075B6P5 120 aa6.84□□□□□ -1.32
NUP50-214ENST00000469163 IGKV2D-28P01615 120 aa6.84□□□□□ -1.32
NUP50-214ENST00000469163 KRTAP10-11P60412 298 aa6.84□□□□□ -1.32
NUP50-214ENST00000469163 LENEPQ9Y5L5 61 aa6.83□□□□□ -1.32
NUP50-214ENST00000469163 A0A0J9YWU9 116 aa6.83□□□□□ -1.32
NUP50-214ENST00000469163 MED14OSP0DP75 135 aa6.83□□□□□ -1.32
NUP50-214ENST00000469163 COX6A2Q02221 97 aa6.83□□□□□ -1.32
NUP50-214ENST00000469163 CELA1Q9UNI1 258 aa6.82□□□□□ -1.32
NUP50-214ENST00000469163 A6NN06 94 aa6.81□□□□□ -1.32
NUP50-214ENST00000469163 ERC2-IT1O76042 136 aa6.81□□□□□ -1.32
NUP50-214ENST00000469163 CXCL6P80162 114 aa6.81□□□□□ -1.32
NUP50-214ENST00000469163 PSCAO43653 123 aa6.81□□□□□ -1.32
NUP50-214ENST00000469163 COX7B2Q8TF08 81 aa6.81□□□□□ -1.32
NUP50-214ENST00000469163 FAM104AQ969W3 186 aa6.8□□□□□ -1.32
NUP50-214ENST00000469163 ANGP03950 147 aaKnown RBP6.79□□□□□ -1.32
NUP50-214ENST00000469163 Q6ZQT0 140 aa6.79□□□□□ -1.32
NUP50-214ENST00000469163 NTM-AS1Q6ZSK4 140 aa6.79□□□□□ -1.32
NUP50-214ENST00000469163 C16orf74Q96GX8 76 aa6.79□□□□□ -1.32
NUP50-214ENST00000469163 FAM30AQ9NZY2 134 aa6.79□□□□□ -1.32
NUP50-214ENST00000469163 TRBV6-8A0A0A6YYG3 113 aa6.79□□□□□ -1.32
NUP50-214ENST00000469163 PRAC1Q96KF2 57 aa6.79□□□□□ -1.32
NUP50-214ENST00000469163 CMC4P56277 68 aaPredicted RBP6.78□□□□□ -1.32
NUP50-214ENST00000469163 Q8N814 137 aa6.78□□□□□ -1.32
NUP50-214ENST00000469163 SMIM1B2RUZ4 78 aa6.78□□□□□ -1.32
NUP50-214ENST00000469163 SPART-AS1P0CW21 52 aa6.78□□□□□ -1.32
NUP50-214ENST00000469163 CCL18P55774 89 aa6.77□□□□□ -1.32
NUP50-214ENST00000469163 LINC00467Q9BRT7 94 aa6.77□□□□□ -1.32
NUP50-214ENST00000469163 GIG44P09565 113 aaPredicted RBP6.77□□□□□ -1.33
NUP50-214ENST00000469163 LINC01554Q52M75 96 aa6.77□□□□□ -1.33
NUP50-214ENST00000469163 IGLV5-39A0A0G2JS06 123 aa6.76□□□□□ -1.33
NUP50-214ENST00000469163 K7EQD1 137 aa6.76□□□□□ -1.33
NUP50-214ENST00000469163 OCR1Q9BZK8 76 aa6.76□□□□□ -1.33
NUP50-214ENST00000469163 LINC00242Q5T6M2 205 aa6.75□□□□□ -1.33
NUP50-214ENST00000469163 UBE2DNLQ8IWF7 75 aa6.75□□□□□ -1.33
NUP50-214ENST00000469163 C19orf73Q9NVV2 129 aa6.75□□□□□ -1.33
NUP50-214ENST00000469163 KLK12Q9UKR0 248 aa6.75□□□□□ -1.33
NUP50-214ENST00000469163 DEFB131BA0A096LNP1 70 aa6.74□□□□□ -1.33
NUP50-214ENST00000469163 LINC00313P59037 77 aa6.73□□□□□ -1.33
NUP50-214ENST00000469163 LIMD2Q9BT23 127 aa6.73□□□□□ -1.33
NUP50-214ENST00000469163 IGLV5-45A0A087WSX0 123 aa6.72□□□□□ -1.33
NUP50-214ENST00000469163 CHCHD7Q9BUK0 85 aa6.72□□□□□ -1.33
NUP50-214ENST00000469163 KLK9Q2XQG4 91 aa6.72□□□□□ -1.33
NUP50-214ENST00000469163 X6R8D5 127 aa6.71□□□□□ -1.33
NUP50-214ENST00000469163 PRO0255Q9UI72 69 aa6.71□□□□□ -1.34
NUP50-214ENST00000469163 C9orf116Q5BN46 136 aaPredicted RBP6.71□□□□□ -1.34
NUP50-214ENST00000469163 ZNF706Q9Y5V0 76 aaPredicted RBP6.71□□□□□ -1.34
NUP50-214ENST00000469163 PRR3P79522 188 aaKnown RBP6.7□□□□□ -1.34
NUP50-214ENST00000469163 CSMD3Q7Z407 3707 aa6.7□□□□□ -1.34
NUP50-214ENST00000469163 IGKV2D-24A0A075B6R9 120 aa6.7□□□□□ -1.34
NUP50-214ENST00000469163 K7EIL1 84 aa6.7□□□□□ -1.34
NUP50-214ENST00000469163 MP68P56378 58 aa6.7□□□□□ -1.34
NUP50-214ENST00000469163 MOBPQ13875 183 aa6.7□□□□□ -1.34
NUP50-214ENST00000469163 LOC110117498A0A087WWA1 95 aa6.69□□□□□ -1.34
NUP50-214ENST00000469163 TRBV6-4A0A1B0GX49 114 aa6.69□□□□□ -1.34
NUP50-214ENST00000469163 KPRPQ5T749 579 aaPredicted RBP6.69□□□□□ -1.34
NUP50-214ENST00000469163 SMIM29Q86T20 159 aa6.69□□□□□ -1.34
NUP50-214ENST00000469163 IGLV4-60A0A075B6I1 120 aa6.68□□□□□ -1.34
NUP50-214ENST00000469163 C6orf99Q4VX62 202 aa6.68□□□□□ -1.34
NUP50-214ENST00000469163 Q8N9P0 234 aaPredicted RBP6.68□□□□□ -1.34
NUP50-214ENST00000469163 MUC7Q8TAX7 377 aa6.68□□□□□ -1.34
NUP50-214ENST00000469163 CDC42SE1Q9NRR8 79 aa6.68□□□□□ -1.34
NUP50-214ENST00000469163 CYP4F30PQ9H0H9 118 aa6.68□□□□□ -1.34
NUP50-214ENST00000469163 PDE6GP18545 87 aa6.67□□□□□ -1.34
NUP50-214ENST00000469163 HIGD2BQ4VC39 106 aa6.67□□□□□ -1.34
NUP50-214ENST00000469163 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.67□□□□□ -1.34
NUP50-214ENST00000469163 CSNK1G2-AS1Q8NCQ2 148 aa6.67□□□□□ -1.34
NUP50-214ENST00000469163 A8MTW9 85 aa6.67□□□□□ -1.34
NUP50-214ENST00000469163 IGKV4-1P06312 121 aa6.67□□□□□ -1.34
NUP50-214ENST00000469163 LINC00167Q96N53 147 aa6.67□□□□□ -1.34
NUP50-214ENST00000469163 Q6ZQY7 126 aa6.65□□□□□ -1.34
NUP50-214ENST00000469163 WFDC10BQ8IUB3 73 aa6.65□□□□□ -1.34
NUP50-214ENST00000469163 B9D2Q9BPU9 175 aa6.65□□□□□ -1.34
NUP50-214ENST00000469163 ADM2Q7Z4H4 148 aa6.65□□□□□ -1.35
NUP50-214ENST00000469163 C10orf25Q5T742 122 aa6.64□□□□□ -1.35
NUP50-214ENST00000469163 CMYA5Q8N3K9 4069 aa6.64□□□□□ -1.35
NUP50-214ENST00000469163 LINC00208Q96KT6 92 aa6.64□□□□□ -1.35
NUP50-214ENST00000469163 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.63□□□□□ -1.35
NUP50-214ENST00000469163 Q75L30 129 aa6.63□□□□□ -1.35
NUP50-214ENST00000469163 Q8NAQ8 132 aa6.63□□□□□ -1.35
NUP50-214ENST00000469163 ANK2Q01484 3957 aa6.63□□□□□ -1.35
NUP50-214ENST00000469163 C3orf84H3BNL1 204 aa6.62□□□□□ -1.35
NUP50-214ENST00000469163 RETNLBQ9BQ08 111 aa6.62□□□□□ -1.35
NUP50-214ENST00000469163 CDC42SE2Q9NRR3 84 aa6.62□□□□□ -1.35
NUP50-214ENST00000469163 CASC2Q6XLA1 102 aa6.61□□□□□ -1.35
NUP50-214ENST00000469163 LINC00612Q8N6U2 182 aa6.61□□□□□ -1.35
NUP50-214ENST00000469163 LINC00575Q6W349 94 aa6.6□□□□□ -1.35
NUP50-214ENST00000469163 LOC101927531A0A1B0GV80 90 aa6.6□□□□□ -1.35
NUP50-214ENST00000469163 REG3AQ06141 175 aa6.6□□□□□ -1.35
NUP50-214ENST00000469163 NDUFB1O75438 58 aa6.59□□□□□ -1.35
NUP50-214ENST00000469163 LY6G6CO95867 125 aa6.59□□□□□ -1.35
NUP50-214ENST00000469163 ST20-AS1Q8NBB2 130 aa6.59□□□□□ -1.35
NUP50-214ENST00000469163 DNHD1Q96M86 4753 aa6.58□□□□□ -1.36
NUP50-214ENST00000469163 ETDCA0A1B0GVM5 59 aa6.58□□□□□ -1.36
NUP50-214ENST00000469163 XAGE1AQ9HD64 81 aa6.57□□□□□ -1.36
NUP50-214ENST00000469163 COL7A1Q02388 2944 aa6.57□□□□□ -1.36
NUP50-214ENST00000469163 CHCHD10Q8WYQ3 142 aaPredicted RBP6.57□□□□□ -1.36
NUP50-214ENST00000469163 MEGF8Q7Z7M0 2845 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms