RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 ETDCA0A1B0GVM5 59 aa11.93□□□□□ -0.5
NPHP4-206ENST00000468253 CRYGAP11844 174 aa11.91□□□□□ -0.5
NPHP4-206ENST00000468253 FAM229BQ4G0N7 80 aa11.91□□□□□ -0.5
NPHP4-206ENST00000468253 B5MCH6 92 aa11.9□□□□□ -0.5
NPHP4-206ENST00000468253 HIGD2AQ9BW72 106 aa11.9□□□□□ -0.5
NPHP4-206ENST00000468253 TRAV23DV6A0A075B6W5 121 aa11.89□□□□□ -0.51
NPHP4-206ENST00000468253 MUSTN1Q8IVN3 82 aa11.89□□□□□ -0.51
NPHP4-206ENST00000468253 JOSD1Q15040 202 aaPredicted RBP11.88□□□□□ -0.51
NPHP4-206ENST00000468253 ZNF73O43830 326 aaPredicted RBP11.87□□□□□ -0.51
NPHP4-206ENST00000468253 OR13C6PQ8NH95 151 aa11.87□□□□□ -0.51
NPHP4-206ENST00000468253 DLEU1O43261 78 aa11.86□□□□□ -0.51
NPHP4-206ENST00000468253 COX8AP10176 69 aa11.86□□□□□ -0.51
NPHP4-206ENST00000468253 SMCR5Q8TEV8 140 aa11.86□□□□□ -0.51
NPHP4-206ENST00000468253 HINT1P49773 126 aaPredicted RBP11.85□□□□□ -0.51
NPHP4-206ENST00000468253 Q6ZRX8 168 aa11.85□□□□□ -0.51
NPHP4-206ENST00000468253 ZNF706Q9Y5V0 76 aaPredicted RBP11.85□□□□□ -0.51
NPHP4-206ENST00000468253 HMCN2Q8NDA2 5059 aa11.85□□□□□ -0.51
NPHP4-206ENST00000468253 A0A087X002 238 aa11.84□□□□□ -0.51
NPHP4-206ENST00000468253 ANAPC11Q9NYG5 84 aa11.84□□□□□ -0.51
NPHP4-206ENST00000468253 SPRR4Q96PI1 79 aa11.83□□□□□ -0.52
NPHP4-206ENST00000468253 TYMSOSQ8TAI1 123 aa11.81□□□□□ -0.52
NPHP4-206ENST00000468253 Q9BRP9 147 aa11.8□□□□□ -0.52
NPHP4-206ENST00000468253 TRAV13-2A0A0B4J235 113 aa11.79□□□□□ -0.52
NPHP4-206ENST00000468253 KRTAP13-2Q52LG2 175 aa11.79□□□□□ -0.52
NPHP4-206ENST00000468253 VAMP8Q9BV40 100 aa11.79□□□□□ -0.52
NPHP4-206ENST00000468253 TRBV7-6A0A0J9YX20 115 aa11.78□□□□□ -0.52
NPHP4-206ENST00000468253 SPATA45Q537H7 98 aa11.78□□□□□ -0.52
NPHP4-206ENST00000468253 A6NDN8 102 aa11.77□□□□□ -0.53
NPHP4-206ENST00000468253 LINC00483Q53H64 154 aa11.77□□□□□ -0.53
NPHP4-206ENST00000468253 PAM16Q9Y3D7 125 aa11.77□□□□□ -0.53
NPHP4-206ENST00000468253 ERC2-IT1O76042 136 aa11.76□□□□□ -0.53
NPHP4-206ENST00000468253 C14orf144Q96I85 54 aa11.76□□□□□ -0.53
NPHP4-206ENST00000468253 TMA7Q9Y2S6 64 aaKnown RBP11.76□□□□□ -0.53
NPHP4-206ENST00000468253 CTAG1AP78358 180 aa11.75□□□□□ -0.53
NPHP4-206ENST00000468253 DHRS4-AS1Q9P1J3 65 aa11.75□□□□□ -0.53
NPHP4-206ENST00000468253 HIGD1BQ9P298 99 aa11.75□□□□□ -0.53
NPHP4-206ENST00000468253 C6orf99Q4VX62 202 aa11.74□□□□□ -0.53
NPHP4-206ENST00000468253 SLC25A34Q6PIV7 304 aa11.74□□□□□ -0.53
NPHP4-206ENST00000468253 HIST1H4GQ99525 98 aa11.74□□□□□ -0.53
NPHP4-206ENST00000468253 A4D1N5 150 aa11.73□□□□□ -0.53
NPHP4-206ENST00000468253 ELOF1P60002 83 aaKnown RBP11.73□□□□□ -0.53
NPHP4-206ENST00000468253 PYY3Q5JQD4 70 aa11.73□□□□□ -0.53
NPHP4-206ENST00000468253 COX7BP24311 80 aa11.72□□□□□ -0.53
NPHP4-206ENST00000468253 GAGE2AQ6NT46 116 aa11.71□□□□□ -0.53
NPHP4-206ENST00000468253 A0A1B0GWB2 263 aa11.69□□□□□ -0.54
NPHP4-206ENST00000468253 C3orf22Q8N5N4 141 aa11.68□□□□□ -0.54
NPHP4-206ENST00000468253 LINC00304Q8N9R0 145 aa11.67□□□□□ -0.54
NPHP4-206ENST00000468253 SMIM11BQ8TCY0 68 aa11.67□□□□□ -0.54
NPHP4-206ENST00000468253 SPAG11AQ6PDA7 123 aa11.66□□□□□ -0.54
NPHP4-206ENST00000468253 TAL2Q16559 108 aa11.65□□□□□ -0.54
NPHP4-206ENST00000468253 C2orf91Q6ZV80 131 aa11.65□□□□□ -0.54
NPHP4-206ENST00000468253 SSBP3-AS1Q7Z2R9 100 aa11.65□□□□□ -0.54
NPHP4-206ENST00000468253 SPRR1BP22528 89 aa11.64□□□□□ -0.55
NPHP4-206ENST00000468253 VAMP3Q15836 100 aa11.64□□□□□ -0.55
NPHP4-206ENST00000468253 ST20-AS1Q8NBB2 130 aa11.63□□□□□ -0.55
NPHP4-206ENST00000468253 TSPAN13O95857 204 aa11.62□□□□□ -0.55
NPHP4-206ENST00000468253 CFC1BP0CG36 223 aa11.6□□□□□ -0.55
NPHP4-206ENST00000468253 CFC1P0CG37 223 aa11.6□□□□□ -0.55
NPHP4-206ENST00000468253 NHP2Q9NX24 153 aaKnown RBP11.6□□□□□ -0.55
NPHP4-206ENST00000468253 C4orf48Q5BLP8 95 aa11.59□□□□□ -0.55
NPHP4-206ENST00000468253 CEND1Q8N111 149 aa11.58□□□□□ -0.56
NPHP4-206ENST00000468253 Q8NBF4 154 aa11.57□□□□□ -0.56
NPHP4-206ENST00000468253 A0A0B4J2C4 111 aa11.56□□□□□ -0.56
NPHP4-206ENST00000468253 TEX49A0A1B0GTD5 131 aa11.56□□□□□ -0.56
NPHP4-206ENST00000468253 C12orf57Q99622 126 aa11.56□□□□□ -0.56
NPHP4-206ENST00000468253 IGLV9-49A0A0B4J1Y8 123 aa11.55□□□□□ -0.56
NPHP4-206ENST00000468253 TMEM238LA0A1B0GVL6 79 aa11.55□□□□□ -0.56
NPHP4-206ENST00000468253 A6NJY4 79 aa11.55□□□□□ -0.56
NPHP4-206ENST00000468253 SLC25A20O43772 301 aa11.55□□□□□ -0.56
NPHP4-206ENST00000468253 SPINK1P00995 79 aa11.55□□□□□ -0.56
NPHP4-206ENST00000468253 LINC00575Q6W349 94 aa11.55□□□□□ -0.56
NPHP4-206ENST00000468253 RAB37Q96AX2 223 aa11.55□□□□□ -0.56
NPHP4-206ENST00000468253 LAMTOR3Q9UHA4 124 aa11.55□□□□□ -0.56
NPHP4-206ENST00000468253 MOBPQ13875 183 aa11.54□□□□□ -0.56
NPHP4-206ENST00000468253 BVES-AS1Q5T3Y7 98 aa11.54□□□□□ -0.56
NPHP4-206ENST00000468253 UQCR10Q9UDW1 63 aa11.54□□□□□ -0.56
NPHP4-206ENST00000468253 LRP2P98164 4655 aa11.54□□□□□ -0.56
NPHP4-206ENST00000468253 IGLV5-48A0A075B6I7 105 aa11.53□□□□□ -0.56
NPHP4-206ENST00000468253 HSD52Q0P140 79 aa11.51□□□□□ -0.57
NPHP4-206ENST00000468253 PRR4Q16378 134 aa11.51□□□□□ -0.57
NPHP4-206ENST00000468253 DEFB105AQ8NG35 78 aa11.51□□□□□ -0.57
NPHP4-206ENST00000468253 LINC01547P58512 204 aaPredicted RBP11.5□□□□□ -0.57
NPHP4-206ENST00000468253 hADV29S1A0JD25 119 aa11.49□□□□□ -0.57
NPHP4-206ENST00000468253 RPS29P62273 56 aaKnown RBP11.49□□□□□ -0.57
NPHP4-206ENST00000468253 PRO1854Q9UHT4 67 aa11.49□□□□□ -0.57
NPHP4-206ENST00000468253 FXYD2P54710 66 aa11.48□□□□□ -0.57
NPHP4-206ENST00000468253 C9orf153Q5TBE3 101 aa11.48□□□□□ -0.57
NPHP4-206ENST00000468253 UBR4Q5T4S7 5183 aa11.47□□□□□ -0.57
NPHP4-206ENST00000468253 H0YGX0 51 aa11.47□□□□□ -0.57
NPHP4-206ENST00000468253 SMIM29Q86T20 159 aa11.47□□□□□ -0.57
NPHP4-206ENST00000468253 H7C2G1 150 aa11.46□□□□□ -0.57
NPHP4-206ENST00000468253 Q8N377 158 aa11.46□□□□□ -0.57
NPHP4-206ENST00000468253 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.44□□□□□ -0.58
NPHP4-206ENST00000468253 SNCGO76070 127 aa11.43□□□□□ -0.58
NPHP4-206ENST00000468253 Q1RN00 199 aa11.42□□□□□ -0.58
NPHP4-206ENST00000468253 PRO1933Q9H354 126 aa11.42□□□□□ -0.58
NPHP4-206ENST00000468253 SMIM6P0DI80 62 aa11.41□□□□□ -0.58
NPHP4-206ENST00000468253 Q6ZQY7 126 aa11.41□□□□□ -0.58
NPHP4-206ENST00000468253 CD164Q04900 197 aa11.4□□□□□ -0.58
NPHP4-206ENST00000468253 FP248Q71RG6 208 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms