RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 FAM229BQ4G0N7 80 aa8.26□□□□□ -1.09
CCHCR1-211ENST00000467553 KRTAP13-2Q52LG2 175 aa8.26□□□□□ -1.09
CCHCR1-211ENST00000467553 MUC2Q02817 5179 aa8.26□□□□□ -1.09
CCHCR1-211ENST00000467553 IGLV6-57P01721 117 aa8.25□□□□□ -1.09
CCHCR1-211ENST00000467553 SNRPEP62304 92 aaKnown RBP8.25□□□□□ -1.09
CCHCR1-211ENST00000467553 OR13C6PQ8NH95 151 aa8.25□□□□□ -1.09
CCHCR1-211ENST00000467553 B5MCH6 92 aa8.24□□□□□ -1.09
CCHCR1-211ENST00000467553 CTAG1AP78358 180 aa8.24□□□□□ -1.09
CCHCR1-211ENST00000467553 PCP2Q8IVA1 136 aa8.24□□□□□ -1.09
CCHCR1-211ENST00000467553 SPANXCQ9NY87 97 aa8.24□□□□□ -1.09
CCHCR1-211ENST00000467553 TRAV23DV6A0A075B6W5 121 aa8.23□□□□□ -1.09
CCHCR1-211ENST00000467553 A0A0U1RQV1 116 aa8.23□□□□□ -1.09
CCHCR1-211ENST00000467553 SPRR4Q96PI1 79 aa8.23□□□□□ -1.09
CCHCR1-211ENST00000467553 ZNF706Q9Y5V0 76 aaPredicted RBP8.23□□□□□ -1.09
CCHCR1-211ENST00000467553 PPDPFQ9H3Y8 114 aa8.22□□□□□ -1.09
CCHCR1-211ENST00000467553 HSBP1L1C9JCN9 74 aa8.21□□□□□ -1.1
CCHCR1-211ENST00000467553 C3orf22Q8N5N4 141 aa8.21□□□□□ -1.1
CCHCR1-211ENST00000467553 SPANXDQ9BXN6 97 aa8.21□□□□□ -1.1
CCHCR1-211ENST00000467553 ZNF73O43830 326 aaPredicted RBP8.2□□□□□ -1.1
CCHCR1-211ENST00000467553 ERC2-IT1O76042 136 aa8.2□□□□□ -1.1
CCHCR1-211ENST00000467553 SCGB1D1O95968 90 aa8.2□□□□□ -1.1
CCHCR1-211ENST00000467553 LINC00518Q8N0U6 118 aa8.2□□□□□ -1.1
CCHCR1-211ENST00000467553 CBY1Q9Y3M2 126 aa8.2□□□□□ -1.1
CCHCR1-211ENST00000467553 C5orf52A6NGY3 159 aa8.19□□□□□ -1.1
CCHCR1-211ENST00000467553 HINT1P49773 126 aaPredicted RBP8.19□□□□□ -1.1
CCHCR1-211ENST00000467553 GAGE2AQ6NT46 116 aa8.19□□□□□ -1.1
CCHCR1-211ENST00000467553 Q6ZRX8 168 aa8.19□□□□□ -1.1
CCHCR1-211ENST00000467553 LINC00304Q8N9R0 145 aa8.19□□□□□ -1.1
CCHCR1-211ENST00000467553 Q9BRP9 147 aa8.19□□□□□ -1.1
CCHCR1-211ENST00000467553 IFITM1P13164 125 aa8.18□□□□□ -1.1
CCHCR1-211ENST00000467553 JOSD1Q15040 202 aaPredicted RBP8.18□□□□□ -1.1
CCHCR1-211ENST00000467553 MUSTN1Q8IVN3 82 aa8.18□□□□□ -1.1
CCHCR1-211ENST00000467553 COPS9Q8WXC6 57 aa8.18□□□□□ -1.1
CCHCR1-211ENST00000467553 Q6ZVH6 145 aa8.17□□□□□ -1.1
CCHCR1-211ENST00000467553 A6NDN8 102 aa8.14□□□□□ -1.11
CCHCR1-211ENST00000467553 LINC00483Q53H64 154 aa8.13□□□□□ -1.11
CCHCR1-211ENST00000467553 C4orf48Q5BLP8 95 aa8.13□□□□□ -1.11
CCHCR1-211ENST00000467553 IGLV9-49A0A0B4J1Y8 123 aa8.12□□□□□ -1.11
CCHCR1-211ENST00000467553 C6orf99Q4VX62 202 aa8.12□□□□□ -1.11
CCHCR1-211ENST00000467553 ST20-AS1Q8NBB2 130 aa8.12□□□□□ -1.11
CCHCR1-211ENST00000467553 COX7BP24311 80 aa8.11□□□□□ -1.11
CCHCR1-211ENST00000467553 MUC17Q685J3 4493 aa8.1□□□□□ -1.11
CCHCR1-211ENST00000467553 TPRXLQ17RH7 258 aa8.1□□□□□ -1.11
CCHCR1-211ENST00000467553 SPAG11AQ6PDA7 123 aa8.1□□□□□ -1.11
CCHCR1-211ENST00000467553 Q8NBF4 154 aa8.1□□□□□ -1.11
CCHCR1-211ENST00000467553 RETNLBQ9BQ08 111 aa8.1□□□□□ -1.11
CCHCR1-211ENST00000467553 DHRS4-AS1Q9P1J3 65 aa8.09□□□□□ -1.11
CCHCR1-211ENST00000467553 TRAV13-2A0A0B4J235 113 aa8.08□□□□□ -1.12
CCHCR1-211ENST00000467553 ELOF1P60002 83 aaKnown RBP8.08□□□□□ -1.12
CCHCR1-211ENST00000467553 MOBPQ13875 183 aa8.08□□□□□ -1.12
CCHCR1-211ENST00000467553 SSBP3-AS1Q7Z2R9 100 aa8.07□□□□□ -1.12
CCHCR1-211ENST00000467553 COX8AP10176 69 aa8.06□□□□□ -1.12
CCHCR1-211ENST00000467553 TRBV7-6A0A0J9YX20 115 aa8.05□□□□□ -1.12
CCHCR1-211ENST00000467553 A4D1N5 150 aa8.05□□□□□ -1.12
CCHCR1-211ENST00000467553 TAL2Q16559 108 aa8.05□□□□□ -1.12
CCHCR1-211ENST00000467553 C9orf153Q5TBE3 101 aa8.05□□□□□ -1.12
CCHCR1-211ENST00000467553 SMIM11BQ8TCY0 68 aa8.05□□□□□ -1.12
CCHCR1-211ENST00000467553 C14orf144Q96I85 54 aa8.05□□□□□ -1.12
CCHCR1-211ENST00000467553 HIST1H4GQ99525 98 aa8.05□□□□□ -1.12
CCHCR1-211ENST00000467553 CDIP1Q9H305 208 aa8.05□□□□□ -1.12
CCHCR1-211ENST00000467553 PAM16Q9Y3D7 125 aa8.05□□□□□ -1.12
CCHCR1-211ENST00000467553 IGLV7-46A0A075B6I9 117 aa8.04□□□□□ -1.12
CCHCR1-211ENST00000467553 SPATA45Q537H7 98 aa8.04□□□□□ -1.12
CCHCR1-211ENST00000467553 DEFB105AQ8NG35 78 aa8.04□□□□□ -1.12
CCHCR1-211ENST00000467553 A0A1B0GWB2 263 aa8.03□□□□□ -1.12
CCHCR1-211ENST00000467553 VAMP8Q9BV40 100 aa8.03□□□□□ -1.12
CCHCR1-211ENST00000467553 DLEU1O43261 78 aa8.02□□□□□ -1.13
CCHCR1-211ENST00000467553 SPINK1P00995 79 aa8.02□□□□□ -1.13
CCHCR1-211ENST00000467553 FP248Q71RG6 208 aaPredicted RBP8.02□□□□□ -1.13
CCHCR1-211ENST00000467553 SPRR1BP22528 89 aa8.01□□□□□ -1.13
CCHCR1-211ENST00000467553 SLC25A34Q6PIV7 304 aa8.01□□□□□ -1.13
CCHCR1-211ENST00000467553 C12orf57Q99622 126 aa8.01□□□□□ -1.13
CCHCR1-211ENST00000467553 LAMTOR3Q9UHA4 124 aa8.01□□□□□ -1.13
CCHCR1-211ENST00000467553 VAMP3Q15836 100 aa8□□□□□ -1.13
CCHCR1-211ENST00000467553 TMA7Q9Y2S6 64 aaKnown RBP8□□□□□ -1.13
CCHCR1-211ENST00000467553 FAT4Q6V0I7 4981 aa8□□□□□ -1.13
CCHCR1-211ENST00000467553 TEX49A0A1B0GTD5 131 aa7.98□□□□□ -1.13
CCHCR1-211ENST00000467553 Q1RN00 199 aa7.98□□□□□ -1.13
CCHCR1-211ENST00000467553 LCE2AQ5TA79 106 aaPredicted RBP7.98□□□□□ -1.13
CCHCR1-211ENST00000467553 SLC25A20O43772 301 aa7.97□□□□□ -1.13
CCHCR1-211ENST00000467553 NHP2Q9NX24 153 aaKnown RBP7.97□□□□□ -1.13
CCHCR1-211ENST00000467553 HIGD1BQ9P298 99 aa7.96□□□□□ -1.14
CCHCR1-211ENST00000467553 HRCT1Q6UXD1 115 aa7.95□□□□□ -1.14
CCHCR1-211ENST00000467553 H7C2G1 150 aa7.94□□□□□ -1.14
CCHCR1-211ENST00000467553 LINC01547P58512 204 aaPredicted RBP7.94□□□□□ -1.14
CCHCR1-211ENST00000467553 PYY3Q5JQD4 70 aa7.94□□□□□ -1.14
CCHCR1-211ENST00000467553 LINC00575Q6W349 94 aa7.94□□□□□ -1.14
CCHCR1-211ENST00000467553 C2orf91Q6ZV80 131 aa7.94□□□□□ -1.14
CCHCR1-211ENST00000467553 IGLV5-48A0A075B6I7 105 aa7.93□□□□□ -1.14
CCHCR1-211ENST00000467553 CFC1BP0CG36 223 aa7.93□□□□□ -1.14
CCHCR1-211ENST00000467553 CFC1P0CG37 223 aa7.93□□□□□ -1.14
CCHCR1-211ENST00000467553 RPS29P62273 56 aaKnown RBP7.93□□□□□ -1.14
CCHCR1-211ENST00000467553 SMIM29Q86T20 159 aa7.93□□□□□ -1.14
CCHCR1-211ENST00000467553 Q8N377 158 aa7.93□□□□□ -1.14
CCHCR1-211ENST00000467553 RAB37Q96AX2 223 aa7.93□□□□□ -1.14
CCHCR1-211ENST00000467553 hADV29S1A0JD25 119 aa7.92□□□□□ -1.14
CCHCR1-211ENST00000467553 KRTAP9-2Q9BYQ4 174 aa7.92□□□□□ -1.14
CCHCR1-211ENST00000467553 PRO1933Q9H354 126 aa7.91□□□□□ -1.14
CCHCR1-211ENST00000467553 BVES-AS1Q5T3Y7 98 aa7.9□□□□□ -1.14
CCHCR1-211ENST00000467553 CEND1Q8N111 149 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms