RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
SND1-205ENST00000467238 KIAA0087Q14695 138 aa4.28□□□□□ -1.72
SND1-205ENST00000467238 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
SND1-205ENST00000467238 LINC00242Q5T6M2 205 aa4.28□□□□□ -1.72
SND1-205ENST00000467238 KRTAP11-1Q8IUC1 163 aa4.28□□□□□ -1.72
SND1-205ENST00000467238 NHP2Q9NX24 153 aaKnown RBP4.28□□□□□ -1.72
SND1-205ENST00000467238 ERG28Q9UKR5 140 aa4.28□□□□□ -1.72
SND1-205ENST00000467238 TRBV30A0A0K0K1B3 111 aa4.27□□□□□ -1.73
SND1-205ENST00000467238 IGLV7-43P04211 117 aa4.27□□□□□ -1.73
SND1-205ENST00000467238 SPINK8P0C7L1 97 aa4.27□□□□□ -1.73
SND1-205ENST00000467238 GAGE2EQ4V326 116 aa4.27□□□□□ -1.73
SND1-205ENST00000467238 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
SND1-205ENST00000467238 Q6Q795 121 aa4.27□□□□□ -1.73
SND1-205ENST00000467238 KRTAP7-1Q8IUC3 87 aa4.27□□□□□ -1.73
SND1-205ENST00000467238 Q8N8P6 123 aa4.27□□□□□ -1.73
SND1-205ENST00000467238 TMEM141Q96I45 108 aa4.27□□□□□ -1.73
SND1-205ENST00000467238 HIST1H4GQ99525 98 aa4.27□□□□□ -1.73
SND1-205ENST00000467238 KRTAP4-4Q9BYR3 166 aa4.27□□□□□ -1.73
SND1-205ENST00000467238 GAGE2DQ9UEU5 116 aa4.27□□□□□ -1.73
SND1-205ENST00000467238 MUC17Q685J3 4493 aa4.27□□□□□ -1.73
SND1-205ENST00000467238 A0A096LNJ9 63 aa4.26□□□□□ -1.73
SND1-205ENST00000467238 LOC389332A0A1B0GUA5 103 aa4.26□□□□□ -1.73
SND1-205ENST00000467238 UBE2D1P51668 147 aa4.26□□□□□ -1.73
SND1-205ENST00000467238 FXYD2P54710 66 aa4.26□□□□□ -1.73
SND1-205ENST00000467238 FAM19A5Q7Z5A7 132 aaPredicted RBP4.26□□□□□ -1.73
SND1-205ENST00000467238 TEN1Q86WV5 123 aa4.26□□□□□ -1.73
SND1-205ENST00000467238 LINC01561Q8N1V8 128 aa4.26□□□□□ -1.73
SND1-205ENST00000467238 DIRC1Q969H9 104 aa4.26□□□□□ -1.73
SND1-205ENST00000467238 ANAPC13Q9BS18 74 aa4.26□□□□□ -1.73
SND1-205ENST00000467238 NDUFC2-KCTD14E9PQ53 114 aa4.25□□□□□ -1.73
SND1-205ENST00000467238 H0Y9J4 135 aa4.25□□□□□ -1.73
SND1-205ENST00000467238 HERVK_113P61574 105 aa4.25□□□□□ -1.73
SND1-205ENST00000467238 ETDBQ3ZM63 59 aa4.25□□□□□ -1.73
SND1-205ENST00000467238 ORMDL2Q53FV1 153 aa4.25□□□□□ -1.73
SND1-205ENST00000467238 C9orf129Q5T035 196 aaKnown RBP4.25□□□□□ -1.73
SND1-205ENST00000467238 ZC2HC1BQ5TFG8 222 aa4.25□□□□□ -1.73
SND1-205ENST00000467238 C2orf82Q6UX34 121 aa4.25□□□□□ -1.73
SND1-205ENST00000467238 C2orf66Q6UXQ4 117 aa4.25□□□□□ -1.73
SND1-205ENST00000467238 PCP2Q8IVA1 136 aa4.25□□□□□ -1.73
SND1-205ENST00000467238 PRR26Q8N8Z3 221 aa4.25□□□□□ -1.73
SND1-205ENST00000467238 AMELXQ99217 191 aa4.25□□□□□ -1.73
SND1-205ENST00000467238 PRO0461Q9UI25 63 aa4.25□□□□□ -1.73
SND1-205ENST00000467238 MYMXA0A1B0GTQ4 84 aa4.24□□□□□ -1.73
SND1-205ENST00000467238 KRTAP1-4P0C5Y4 121 aa4.24□□□□□ -1.73
SND1-205ENST00000467238 SCGB1C2P0DMR2 95 aa4.24□□□□□ -1.73
SND1-205ENST00000467238 FAM19A3Q7Z5A8 133 aa4.24□□□□□ -1.73
SND1-205ENST00000467238 TMEM126AQ9H061 195 aa4.24□□□□□ -1.73
SND1-205ENST00000467238 TP73-AS1Q9UF72 201 aa4.24□□□□□ -1.73
SND1-205ENST00000467238 IGLV1-50A0A075B6I6 118 aa4.23□□□□□ -1.73
SND1-205ENST00000467238 IGIPA6NJ69 53 aa4.23□□□□□ -1.73
SND1-205ENST00000467238 F8VRH5 84 aa4.23□□□□□ -1.73
SND1-205ENST00000467238 SNCGO76070 127 aa4.23□□□□□ -1.73
SND1-205ENST00000467238 UBE2BP63146 152 aa4.23□□□□□ -1.73
SND1-205ENST00000467238 PRSS2P07478 247 aa4.22□□□□□ -1.73
SND1-205ENST00000467238 HERVK_113P63121 156 aa4.22□□□□□ -1.73
SND1-205ENST00000467238 Q8IZM0 81 aa4.22□□□□□ -1.73
SND1-205ENST00000467238 NAA38Q9BRA0 125 aaKnown RBP4.22□□□□□ -1.73
SND1-205ENST00000467238 TOMM7Q9P0U1 55 aa4.22□□□□□ -1.73
SND1-205ENST00000467238 FAT4Q6V0I7 4981 aa4.22□□□□□ -1.73
SND1-205ENST00000467238 C6orf226Q5I0X4 101 aa4.21□□□□□ -1.74
SND1-205ENST00000467238 TIMM17AQ99595 171 aa4.21□□□□□ -1.74
SND1-205ENST00000467238 CDKN2A-AS1Q9UH64 79 aa4.21□□□□□ -1.74
SND1-205ENST00000467238 FAM240AA0A1B0GVK7 77 aa4.2□□□□□ -1.74
SND1-205ENST00000467238 ZNF861PO60384 105 aa4.2□□□□□ -1.74
SND1-205ENST00000467238 ACYP1P07311 99 aa4.2□□□□□ -1.74
SND1-205ENST00000467238 IFITM1P13164 125 aa4.2□□□□□ -1.74
SND1-205ENST00000467238 RPL13AP40429 203 aaKnown RBP4.2□□□□□ -1.74
SND1-205ENST00000467238 SCGB1D4Q6XE38 83 aa4.2□□□□□ -1.74
SND1-205ENST00000467238 TOMM6Q96B49 74 aa4.2□□□□□ -1.74
SND1-205ENST00000467238 IMUPQ9GZP8 106 aa4.2□□□□□ -1.74
SND1-205ENST00000467238 XAGE1AQ9HD64 81 aa4.2□□□□□ -1.74
SND1-205ENST00000467238 C22orf24Q9Y442 160 aa4.2□□□□□ -1.74
SND1-205ENST00000467238 IGKV2D-26A0A0A0MRZ7 120 aa4.19□□□□□ -1.74
SND1-205ENST00000467238 LOC107984156A0A0G2JMH3 177 aa4.19□□□□□ -1.74
SND1-205ENST00000467238 K7ERJ3 54 aa4.19□□□□□ -1.74
SND1-205ENST00000467238 CXCL5P42830 114 aa4.19□□□□□ -1.74
SND1-205ENST00000467238 PSMB2P49721 201 aa4.19□□□□□ -1.74
SND1-205ENST00000467238 NDUFV3P56181 108 aaKnown RBP4.19□□□□□ -1.74
SND1-205ENST00000467238 ARL17AQ8IVW1 177 aa4.19□□□□□ -1.74
SND1-205ENST00000467238 IGLV5-45A0A087WSX0 123 aa4.18□□□□□ -1.74
SND1-205ENST00000467238 A0A0B4J2C4 111 aa4.18□□□□□ -1.74
SND1-205ENST00000467238 ZNF815PA8K554 130 aa4.18□□□□□ -1.74
SND1-205ENST00000467238 SMIM1B2RUZ4 78 aa4.18□□□□□ -1.74
SND1-205ENST00000467238 MT-ATP8P03928 68 aa4.18□□□□□ -1.74
SND1-205ENST00000467238 COX6CP09669 75 aa4.18□□□□□ -1.74
SND1-205ENST00000467238 ATXN8Q156A1 80 aa4.18□□□□□ -1.74
SND1-205ENST00000467238 MRPL55Q7Z7F7 128 aaKnown RBP4.18□□□□□ -1.74
SND1-205ENST00000467238 SCGB3A1Q96QR1 104 aa4.18□□□□□ -1.74
SND1-205ENST00000467238 PRO1854Q9UHT4 67 aa4.18□□□□□ -1.74
SND1-205ENST00000467238 TINCRA0A1B0GVN0 87 aa4.17□□□□□ -1.74
SND1-205ENST00000467238 H3BT86 120 aa4.17□□□□□ -1.74
SND1-205ENST00000467238 SLC25A20O43772 301 aa4.17□□□□□ -1.74
SND1-205ENST00000467238 IGKV2-30P06310 120 aa4.17□□□□□ -1.74
SND1-205ENST00000467238 COX7B2Q8TF08 81 aa4.17□□□□□ -1.74
SND1-205ENST00000467238 A0A087X002 238 aa4.16□□□□□ -1.74
SND1-205ENST00000467238 C11orf86A6NJI1 115 aa4.16□□□□□ -1.74
SND1-205ENST00000467238 BCE1O60756 84 aa4.16□□□□□ -1.74
SND1-205ENST00000467238 TMEM170BQ5T4T1 132 aa4.16□□□□□ -1.74
SND1-205ENST00000467238 COPS9Q8WXC6 57 aa4.16□□□□□ -1.74
SND1-205ENST00000467238 LINC00167Q96N53 147 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms