RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SPTY2D1-AS1A0A0U1RR47 76 aa1.81□□□□□ -2.12
VPS13D-203ENST00000466732 K7EIM0 57 aa1.81□□□□□ -2.12
VPS13D-203ENST00000466732 KLK9Q2XQG4 91 aa1.81□□□□□ -2.12
VPS13D-203ENST00000466732 BRD3OSQ6XYD6 125 aa1.81□□□□□ -2.12
VPS13D-203ENST00000466732 CACNA1GO43497 2377 aa1.81□□□□□ -2.12
VPS13D-203ENST00000466732 ASXL3Q9C0F0 2248 aa1.81□□□□□ -2.12
VPS13D-203ENST00000466732 DEFB131BA0A096LNP1 70 aa1.8□□□□□ -2.12
VPS13D-203ENST00000466732 C10orf55Q5SWW7 151 aa1.8□□□□□ -2.12
VPS13D-203ENST00000466732 PATE1Q8WXA2 126 aa1.8□□□□□ -2.12
VPS13D-203ENST00000466732 WDR87Q6ZQQ6 2873 aa1.8□□□□□ -2.12
VPS13D-203ENST00000466732 PLCE1Q9P212 2302 aa1.79□□□□□ -2.12
VPS13D-203ENST00000466732 TRGV1A0A0A0MS02 117 aa1.79□□□□□ -2.12
VPS13D-203ENST00000466732 A0A1B0GU69 56 aa1.79□□□□□ -2.12
VPS13D-203ENST00000466732 COX6A2Q02221 97 aa1.79□□□□□ -2.12
VPS13D-203ENST00000466732 COX17Q14061 63 aa1.79□□□□□ -2.12
VPS13D-203ENST00000466732 SPINT4Q6UDR6 99 aa1.79□□□□□ -2.12
VPS13D-203ENST00000466732 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.79□□□□□ -2.12
VPS13D-203ENST00000466732 Q8IZM0 81 aa1.79□□□□□ -2.12
VPS13D-203ENST00000466732 LINC00472Q9H8W2 130 aa1.79□□□□□ -2.12
VPS13D-203ENST00000466732 ICE1Q9Y2F5 2266 aa1.79□□□□□ -2.12
VPS13D-203ENST00000466732 SRCAPQ6ZRS2 3230 aa1.79□□□□□ -2.12
VPS13D-203ENST00000466732 AHCTF1Q8WYP5 2266 aa1.78□□□□□ -2.12
VPS13D-203ENST00000466732 A0A087WTM6 91 aa1.78□□□□□ -2.12
VPS13D-203ENST00000466732 HRES1P13985 223 aa1.78□□□□□ -2.12
VPS13D-203ENST00000466732 DEFB104AQ8WTQ1 72 aa1.78□□□□□ -2.12
VPS13D-203ENST00000466732 TECTAO75443 2155 aa1.77□□□□□ -2.13
VPS13D-203ENST00000466732 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
VPS13D-203ENST00000466732 KRTAP12-4P60329 112 aa1.77□□□□□ -2.13
VPS13D-203ENST00000466732 CENPFP49454 3210 aa1.76□□□□□ -2.13
VPS13D-203ENST00000466732 PRO3102Q9H379 93 aa1.76□□□□□ -2.13
VPS13D-203ENST00000466732 KAAG1Q9UBP8 84 aa1.76□□□□□ -2.13
VPS13D-203ENST00000466732 UTRNP46939 3433 aa1.76□□□□□ -2.13
VPS13D-203ENST00000466732 IGLV5-48A0A075B6I7 105 aa1.75□□□□□ -2.13
VPS13D-203ENST00000466732 A0A1B0GU33 70 aa1.75□□□□□ -2.13
VPS13D-203ENST00000466732 K7EQZ3 153 aa1.75□□□□□ -2.13
VPS13D-203ENST00000466732 IGLV7-43P04211 117 aa1.75□□□□□ -2.13
VPS13D-203ENST00000466732 KMT2BQ9UMN6 2715 aaPredicted RBP1.75□□□□□ -2.13
VPS13D-203ENST00000466732 DNAH12Q6ZR08 3092 aa1.75□□□□□ -2.13
VPS13D-203ENST00000466732 NBDYA0A0U1RRE5 68 aa1.74□□□□□ -2.13
VPS13D-203ENST00000466732 IGLV6-57P01721 117 aa1.74□□□□□ -2.13
VPS13D-203ENST00000466732 ACYP2P14621 99 aa1.74□□□□□ -2.13
VPS13D-203ENST00000466732 Q96NJ1 140 aa1.74□□□□□ -2.13
VPS13D-203ENST00000466732 TOMM7Q9P0U1 55 aa1.74□□□□□ -2.13
VPS13D-203ENST00000466732 CUL9Q8IWT3 2517 aa1.73□□□□□ -2.13
VPS13D-203ENST00000466732 ABCA1O95477 2261 aa1.73□□□□□ -2.13
VPS13D-203ENST00000466732 ANGP03950 147 aaKnown RBP1.73□□□□□ -2.13
VPS13D-203ENST00000466732 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
VPS13D-203ENST00000466732 MINOS1Q5TGZ0 78 aa1.73□□□□□ -2.13
VPS13D-203ENST00000466732 WFDC13Q8IUB5 93 aa1.73□□□□□ -2.13
VPS13D-203ENST00000466732 C4orf3Q8WVX3 66 aa1.73□□□□□ -2.13
VPS13D-203ENST00000466732 CCL19Q99731 98 aa1.73□□□□□ -2.13
VPS13D-203ENST00000466732 TP53AIP1Q9HCN2 124 aa1.73□□□□□ -2.13
VPS13D-203ENST00000466732 CEP350Q5VT06 3117 aa1.72□□□□□ -2.13
VPS13D-203ENST00000466732 H3BUA1 57 aa1.72□□□□□ -2.13
VPS13D-203ENST00000466732 APELAP0DMC3 54 aa1.72□□□□□ -2.13
VPS13D-203ENST00000466732 DEFB133Q30KQ1 61 aa1.72□□□□□ -2.13
VPS13D-203ENST00000466732 PCOTHQ58A44 107 aa1.72□□□□□ -2.13
VPS13D-203ENST00000466732 C5orf56Q8N8D9 126 aa1.72□□□□□ -2.13
VPS13D-203ENST00000466732 CNOT1A5YKK6 2376 aaKnown RBP1.71□□□□□ -2.14
VPS13D-203ENST00000466732 FAM186AA6NE01 2351 aa1.71□□□□□ -2.14
VPS13D-203ENST00000466732 RPL37AP61513 92 aaKnown RBP1.71□□□□□ -2.14
VPS13D-203ENST00000466732 WFDC10BQ8IUB3 73 aa1.71□□□□□ -2.14
VPS13D-203ENST00000466732 WNK2Q9Y3S1 2297 aa1.7□□□□□ -2.14
VPS13D-203ENST00000466732 IGKV2-24A0A0C4DH68 120 aa1.7□□□□□ -2.14
VPS13D-203ENST00000466732 A0A1W2PNN7 141 aa1.7□□□□□ -2.14
VPS13D-203ENST00000466732 LYNX1G3V0Z9 82 aa1.7□□□□□ -2.14
VPS13D-203ENST00000466732 DEFB103AP81534 67 aa1.7□□□□□ -2.14
VPS13D-203ENST00000466732 CACNA1EQ15878 2313 aa1.7□□□□□ -2.14
VPS13D-203ENST00000466732 SSBP3-AS1Q7Z2R9 100 aa1.7□□□□□ -2.14
VPS13D-203ENST00000466732 USMG5Q96IX5 58 aa1.7□□□□□ -2.14
VPS13D-203ENST00000466732 COL6A6A6NMZ7 2263 aa1.7□□□□□ -2.14
VPS13D-203ENST00000466732 NBEAQ8NFP9 2946 aa1.69□□□□□ -2.14
VPS13D-203ENST00000466732 A8MTW9 85 aa1.69□□□□□ -2.14
VPS13D-203ENST00000466732 LY6G6CO95867 125 aa1.69□□□□□ -2.14
VPS13D-203ENST00000466732 KRTAP6-3Q3LI67 103 aa1.69□□□□□ -2.14
VPS13D-203ENST00000466732 DEFB108BQ8NET1 73 aa1.69□□□□□ -2.14
VPS13D-203ENST00000466732 C6orf48Q9UBA6 75 aa1.69□□□□□ -2.14
VPS13D-203ENST00000466732 TRANK1O15050 2925 aa1.69□□□□□ -2.14
VPS13D-203ENST00000466732 PIEZO2Q9H5I5 2752 aa1.68□□□□□ -2.14
VPS13D-203ENST00000466732 A0A0G2JQZ4 141 aa1.68□□□□□ -2.14
VPS13D-203ENST00000466732 PRO2289Q9P1D8 64 aa1.68□□□□□ -2.14
VPS13D-203ENST00000466732 CACNA1BQ00975 2339 aa1.67□□□□□ -2.14
VPS13D-203ENST00000466732 TNRC18O15417 2968 aaPredicted RBP1.67□□□□□ -2.14
VPS13D-203ENST00000466732 U3KQA8 63 aa1.67□□□□□ -2.14
VPS13D-203ENST00000466732 SPTBN1Q01082 2364 aaKnown RBP1.67□□□□□ -2.14
VPS13D-203ENST00000466732 RANBP2P49792 3224 aaKnown RBP1.67□□□□□ -2.14
VPS13D-203ENST00000466732 MGAQ8IWI9 3026 aa1.66□□□□□ -2.14
VPS13D-203ENST00000466732 GVQW2A0A096LPI5 108 aaPredicted RBP1.66□□□□□ -2.14
VPS13D-203ENST00000466732 MMP24-AS1A0A0U1RRL7 71 aa1.66□□□□□ -2.14
VPS13D-203ENST00000466732 DEFB131AP59861 70 aa1.66□□□□□ -2.14
VPS13D-203ENST00000466732 RHPN1-AS1Q9BWJ2 59 aa1.66□□□□□ -2.14
VPS13D-203ENST00000466732 PSORS1C2Q9UIG4 136 aa1.66□□□□□ -2.14
VPS13D-203ENST00000466732 SPTBN2O15020 2390 aa1.66□□□□□ -2.14
VPS13D-203ENST00000466732 ALMS1Q8TCU4 4167 aa1.66□□□□□ -2.14
VPS13D-203ENST00000466732 ANKRD17O75179 2603 aaKnown RBP1.66□□□□□ -2.14
VPS13D-203ENST00000466732 HTTP42858 3142 aa1.65□□□□□ -2.14
VPS13D-203ENST00000466732 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.65□□□□□ -2.15
VPS13D-203ENST00000466732 SPINK13Q1W4C9 94 aa1.65□□□□□ -2.15
VPS13D-203ENST00000466732 MAP1BP46821 2468 aaKnown RBP1.64□□□□□ -2.15
VPS13D-203ENST00000466732 COL6A3P12111 3177 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms