RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 LINC00483Q53H64 154 aa9.14□□□□□ -0.95
CRAMP1-204ENST00000466562 SPAG11AQ6PDA7 123 aa9.14□□□□□ -0.95
CRAMP1-204ENST00000466562 Q6ZRX8 168 aa9.14□□□□□ -0.95
CRAMP1-204ENST00000466562 TIMM17BO60830 172 aa9.13□□□□□ -0.95
CRAMP1-204ENST00000466562 KRTDAPP60985 99 aa9.13□□□□□ -0.95
CRAMP1-204ENST00000466562 GAGE2AQ6NT46 116 aa9.13□□□□□ -0.95
CRAMP1-204ENST00000466562 LINC00308Q8TCZ7 52 aa9.13□□□□□ -0.95
CRAMP1-204ENST00000466562 TTTY13Q9BZ97 58 aa9.13□□□□□ -0.95
CRAMP1-204ENST00000466562 ZNF815PA8K554 130 aa9.12□□□□□ -0.95
CRAMP1-204ENST00000466562 MUC2Q02817 5179 aa9.11□□□□□ -0.95
CRAMP1-204ENST00000466562 ZNF73O43830 326 aaPredicted RBP9.11□□□□□ -0.95
CRAMP1-204ENST00000466562 Q8NBF4 154 aa9.11□□□□□ -0.95
CRAMP1-204ENST00000466562 SPANXCQ9NY87 97 aa9.11□□□□□ -0.95
CRAMP1-204ENST00000466562 C4orf48Q5BLP8 95 aa9.1□□□□□ -0.95
CRAMP1-204ENST00000466562 JOSD1Q15040 202 aaPredicted RBP9.09□□□□□ -0.95
CRAMP1-204ENST00000466562 IGLV7-46A0A075B6I9 117 aa9.08□□□□□ -0.96
CRAMP1-204ENST00000466562 TMA7Q9Y2S6 64 aaKnown RBP9.08□□□□□ -0.96
CRAMP1-204ENST00000466562 C20orf202A1L168 122 aa9.07□□□□□ -0.96
CRAMP1-204ENST00000466562 OR13C6PQ8NH95 151 aa9.07□□□□□ -0.96
CRAMP1-204ENST00000466562 CBY1Q9Y3M2 126 aa9.07□□□□□ -0.96
CRAMP1-204ENST00000466562 IGLV9-49A0A0B4J1Y8 123 aa9.06□□□□□ -0.96
CRAMP1-204ENST00000466562 TPRXLQ17RH7 258 aa9.06□□□□□ -0.96
CRAMP1-204ENST00000466562 ANKRD39Q53RE8 183 aa9.06□□□□□ -0.96
CRAMP1-204ENST00000466562 HINT1P49773 126 aaPredicted RBP9.05□□□□□ -0.96
CRAMP1-204ENST00000466562 MOBPQ13875 183 aa9.05□□□□□ -0.96
CRAMP1-204ENST00000466562 SSBP3-AS1Q7Z2R9 100 aa9.05□□□□□ -0.96
CRAMP1-204ENST00000466562 LOC105371267A0A1B0GV96 52 aa9.04□□□□□ -0.96
CRAMP1-204ENST00000466562 SPINK1P00995 79 aa9.04□□□□□ -0.96
CRAMP1-204ENST00000466562 ATOH7Q8N100 152 aa9.04□□□□□ -0.96
CRAMP1-204ENST00000466562 SPANXDQ9BXN6 97 aa9.04□□□□□ -0.96
CRAMP1-204ENST00000466562 SCGB1D4Q6XE38 83 aa9.03□□□□□ -0.96
CRAMP1-204ENST00000466562 LINC00518Q8N0U6 118 aa9.03□□□□□ -0.96
CRAMP1-204ENST00000466562 ST20-AS1Q8NBB2 130 aa9.03□□□□□ -0.96
CRAMP1-204ENST00000466562 CDIP1Q9H305 208 aa9.03□□□□□ -0.96
CRAMP1-204ENST00000466562 C5orf52A6NGY3 159 aa9.02□□□□□ -0.97
CRAMP1-204ENST00000466562 FP248Q71RG6 208 aaPredicted RBP9.01□□□□□ -0.97
CRAMP1-204ENST00000466562 MUC17Q685J3 4493 aa9□□□□□ -0.97
CRAMP1-204ENST00000466562 AKR1D1P51857 326 aa9□□□□□ -0.97
CRAMP1-204ENST00000466562 PCP2Q8IVA1 136 aa9□□□□□ -0.97
CRAMP1-204ENST00000466562 IFITM1P13164 125 aa8.98□□□□□ -0.97
CRAMP1-204ENST00000466562 ELOF1P60002 83 aaKnown RBP8.98□□□□□ -0.97
CRAMP1-204ENST00000466562 RPS29P62273 56 aaKnown RBP8.98□□□□□ -0.97
CRAMP1-204ENST00000466562 C6orf99Q4VX62 202 aa8.98□□□□□ -0.97
CRAMP1-204ENST00000466562 C9orf153Q5TBE3 101 aa8.98□□□□□ -0.97
CRAMP1-204ENST00000466562 HIST3H2BBQ8N257 126 aa8.98□□□□□ -0.97
CRAMP1-204ENST00000466562 DHRS4-AS1Q9P1J3 65 aa8.98□□□□□ -0.97
CRAMP1-204ENST00000466562 COX7BP24311 80 aa8.97□□□□□ -0.97
CRAMP1-204ENST00000466562 Q6ZVH6 145 aa8.97□□□□□ -0.97
CRAMP1-204ENST00000466562 COPS9Q8WXC6 57 aa8.97□□□□□ -0.97
CRAMP1-204ENST00000466562 SPRR1BP22528 89 aa8.96□□□□□ -0.98
CRAMP1-204ENST00000466562 SNRPEP62304 92 aaKnown RBP8.96□□□□□ -0.98
CRAMP1-204ENST00000466562 MUSTN1Q8IVN3 82 aa8.96□□□□□ -0.98
CRAMP1-204ENST00000466562 Q8N377 158 aa8.96□□□□□ -0.98
CRAMP1-204ENST00000466562 HIST1H2BLQ99880 126 aa8.96□□□□□ -0.98
CRAMP1-204ENST00000466562 S100A2P29034 98 aa8.94□□□□□ -0.98
CRAMP1-204ENST00000466562 KRTAP13-3Q3SY46 172 aa8.94□□□□□ -0.98
CRAMP1-204ENST00000466562 A6NDN8 102 aa8.93□□□□□ -0.98
CRAMP1-204ENST00000466562 TRBV7-6A0A0J9YX20 115 aa8.92□□□□□ -0.98
CRAMP1-204ENST00000466562 SLC25A20O43772 301 aa8.92□□□□□ -0.98
CRAMP1-204ENST00000466562 SLC25A34Q6PIV7 304 aa8.92□□□□□ -0.98
CRAMP1-204ENST00000466562 A0A0U1RQV1 116 aa8.91□□□□□ -0.98
CRAMP1-204ENST00000466562 LAMTOR3Q9UHA4 124 aa8.9□□□□□ -0.98
CRAMP1-204ENST00000466562 A0A1B0GWB2 263 aa8.89□□□□□ -0.99
CRAMP1-204ENST00000466562 S100A6P06703 90 aa8.89□□□□□ -0.99
CRAMP1-204ENST00000466562 TAL2Q16559 108 aa8.89□□□□□ -0.99
CRAMP1-204ENST00000466562 FAT4Q6V0I7 4981 aa8.88□□□□□ -0.99
CRAMP1-204ENST00000466562 TRAV13-2A0A0B4J235 113 aa8.88□□□□□ -0.99
CRAMP1-204ENST00000466562 HSBP1L1C9JCN9 74 aa8.88□□□□□ -0.99
CRAMP1-204ENST00000466562 DEFB105AQ8NG35 78 aa8.88□□□□□ -0.99
CRAMP1-204ENST00000466562 TEX49A0A1B0GTD5 131 aa8.87□□□□□ -0.99
CRAMP1-204ENST00000466562 Q1RN00 199 aa8.86□□□□□ -0.99
CRAMP1-204ENST00000466562 SMIM11BQ8TCY0 68 aa8.86□□□□□ -0.99
CRAMP1-204ENST00000466562 LINC01547P58512 204 aaPredicted RBP8.85□□□□□ -0.99
CRAMP1-204ENST00000466562 HRCT1Q6UXD1 115 aa8.85□□□□□ -0.99
CRAMP1-204ENST00000466562 IGLV5-48A0A075B6I7 105 aa8.84□□□□□ -0.99
CRAMP1-204ENST00000466562 A4D1N5 150 aa8.84□□□□□ -0.99
CRAMP1-204ENST00000466562 SMIM29Q86T20 159 aa8.84□□□□□ -0.99
CRAMP1-204ENST00000466562 LIMD2Q9BT23 127 aa8.82□□□□□ -1
CRAMP1-204ENST00000466562 PRO1933Q9H354 126 aa8.82□□□□□ -1
CRAMP1-204ENST00000466562 SCGB1D1O95968 90 aa8.81□□□□□ -1
CRAMP1-204ENST00000466562 ASB16-AS1Q495Z4 193 aa8.81□□□□□ -1
CRAMP1-204ENST00000466562 NHP2Q9NX24 153 aaKnown RBP8.81□□□□□ -1
CRAMP1-204ENST00000466562 CD164Q04900 197 aa8.79□□□□□ -1
CRAMP1-204ENST00000466562 SEC61BP60468 96 aaKnown RBP8.77□□□□□ -1.01
CRAMP1-204ENST00000466562 VAMP3Q15836 100 aa8.77□□□□□ -1.01
CRAMP1-204ENST00000466562 XP32Q5T750 250 aa8.77□□□□□ -1.01
CRAMP1-204ENST00000466562 LCE2AQ5TA79 106 aaPredicted RBP8.77□□□□□ -1.01
CRAMP1-204ENST00000466562 H7C2G1 150 aa8.76□□□□□ -1.01
CRAMP1-204ENST00000466562 COX8AP10176 69 aa8.76□□□□□ -1.01
CRAMP1-204ENST00000466562 LINC00575Q6W349 94 aa8.76□□□□□ -1.01
CRAMP1-204ENST00000466562 A0A0G2JQZ4 141 aa8.75□□□□□ -1.01
CRAMP1-204ENST00000466562 HIST1H4GQ99525 98 aa8.75□□□□□ -1.01
CRAMP1-204ENST00000466562 DLEU1O43261 78 aa8.73□□□□□ -1.01
CRAMP1-204ENST00000466562 Q5XG85 94 aa8.73□□□□□ -1.01
CRAMP1-204ENST00000466562 C12orf57Q99622 126 aa8.73□□□□□ -1.01
CRAMP1-204ENST00000466562 KRTAP4-1Q9BYQ7 146 aa8.73□□□□□ -1.01
CRAMP1-204ENST00000466562 hADV29S1A0JD25 119 aa8.72□□□□□ -1.01
CRAMP1-204ENST00000466562 SMIM6P0DI80 62 aa8.71□□□□□ -1.02
CRAMP1-204ENST00000466562 Q6ZQY7 126 aa8.71□□□□□ -1.02
CRAMP1-204ENST00000466562 C14orf144Q96I85 54 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms