RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 DNAH11Q96DT5 4516 aa3.47□□□□□ -1.85
VPS41-211ENST00000466017 A0A096LNI7 61 aa3.46□□□□□ -1.86
VPS41-211ENST00000466017 TRBV7-6A0A0J9YX20 115 aa3.46□□□□□ -1.86
VPS41-211ENST00000466017 H0YGX0 51 aa3.46□□□□□ -1.86
VPS41-211ENST00000466017 RPL18AQ02543 176 aaKnown RBP3.46□□□□□ -1.86
VPS41-211ENST00000466017 GAGE2BQ13066 116 aa3.46□□□□□ -1.86
VPS41-211ENST00000466017 KRTAP7-1Q8IUC3 87 aa3.46□□□□□ -1.86
VPS41-211ENST00000466017 LINC00337Q8N6G1 96 aa3.46□□□□□ -1.86
VPS41-211ENST00000466017 Q8NDZ9 215 aa3.46□□□□□ -1.86
VPS41-211ENST00000466017 KCNQ1DNQ9H478 68 aa3.46□□□□□ -1.86
VPS41-211ENST00000466017 C22orf24Q9Y442 160 aa3.46□□□□□ -1.86
VPS41-211ENST00000466017 TRBV20-1A0A075B6N2 111 aa3.45□□□□□ -1.86
VPS41-211ENST00000466017 A0A1B0GX51 115 aa3.45□□□□□ -1.86
VPS41-211ENST00000466017 A0A1W2PNN7 141 aa3.45□□□□□ -1.86
VPS41-211ENST00000466017 TSPAN13O95857 204 aa3.45□□□□□ -1.86
VPS41-211ENST00000466017 COX6CP09669 75 aa3.45□□□□□ -1.86
VPS41-211ENST00000466017 SPRR1AP35321 89 aa3.45□□□□□ -1.86
VPS41-211ENST00000466017 LYRM7Q5U5X0 104 aa3.45□□□□□ -1.86
VPS41-211ENST00000466017 Q6ZSA8 131 aa3.45□□□□□ -1.86
VPS41-211ENST00000466017 SPACA4Q8TDM5 124 aa3.45□□□□□ -1.86
VPS41-211ENST00000466017 PLAC8Q9NZF1 115 aa3.45□□□□□ -1.86
VPS41-211ENST00000466017 IGLV1-50A0A075B6I6 118 aa3.44□□□□□ -1.86
VPS41-211ENST00000466017 A0A1B0GVY2 172 aa3.44□□□□□ -1.86
VPS41-211ENST00000466017 A0A1W2PPM0 123 aa3.44□□□□□ -1.86
VPS41-211ENST00000466017 H3BUT2 72 aa3.44□□□□□ -1.86
VPS41-211ENST00000466017 K7ERJ3 54 aa3.44□□□□□ -1.86
VPS41-211ENST00000466017 RPL13AP40429 203 aaKnown RBP3.44□□□□□ -1.86
VPS41-211ENST00000466017 PRR3P79522 188 aaKnown RBP3.44□□□□□ -1.86
VPS41-211ENST00000466017 S100A7L2Q5SY68 101 aa3.44□□□□□ -1.86
VPS41-211ENST00000466017 SERTAD4-AS1Q5TG53 156 aa3.44□□□□□ -1.86
VPS41-211ENST00000466017 MRPL55Q7Z7F7 128 aaKnown RBP3.44□□□□□ -1.86
VPS41-211ENST00000466017 SMIM29Q86T20 159 aa3.44□□□□□ -1.86
VPS41-211ENST00000466017 NKAPP1Q8N9T2 125 aa3.44□□□□□ -1.86
VPS41-211ENST00000466017 SMIM11BQ8TCY0 68 aa3.44□□□□□ -1.86
VPS41-211ENST00000466017 LINC00167Q96N53 147 aa3.44□□□□□ -1.86
VPS41-211ENST00000466017 DNAH5Q8TE73 4624 aa3.43□□□□□ -1.86
VPS41-211ENST00000466017 FAT2Q9NYQ8 4349 aa3.43□□□□□ -1.86
VPS41-211ENST00000466017 FRAS1Q86XX4 4008 aa3.43□□□□□ -1.86
VPS41-211ENST00000466017 TRBV10-3A0A0K0K1G6 114 aa3.43□□□□□ -1.86
VPS41-211ENST00000466017 INAFM2P0DMQ5 153 aa3.43□□□□□ -1.86
VPS41-211ENST00000466017 FABP2P12104 132 aa3.43□□□□□ -1.86
VPS41-211ENST00000466017 VAMP3Q15836 100 aa3.43□□□□□ -1.86
VPS41-211ENST00000466017 OR13C6PQ8NH95 151 aa3.43□□□□□ -1.86
VPS41-211ENST00000466017 C7orf33Q8WU49 177 aa3.43□□□□□ -1.86
VPS41-211ENST00000466017 LINC01600Q96MT4 127 aa3.43□□□□□ -1.86
VPS41-211ENST00000466017 RYR2Q92736 4967 aa3.42□□□□□ -1.86
VPS41-211ENST00000466017 TRAV23DV6A0A075B6W5 121 aa3.42□□□□□ -1.86
VPS41-211ENST00000466017 IGKV2-24A0A0C4DH68 120 aa3.42□□□□□ -1.86
VPS41-211ENST00000466017 FAM168BA1KXE4 195 aa3.42□□□□□ -1.86
VPS41-211ENST00000466017 KRTAP4-16G5E9R7 235 aaPredicted RBP3.42□□□□□ -1.86
VPS41-211ENST00000466017 NCR3O14931 201 aa3.42□□□□□ -1.86
VPS41-211ENST00000466017 SCGB1C2P0DMR2 95 aa3.42□□□□□ -1.86
VPS41-211ENST00000466017 GAGE10A6NGK3 116 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 H0Y9J4 135 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 H3BQ85 93 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 PANO1I0J062 215 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 M0QXV9 152 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 ZNF73O43830 326 aaPredicted RBP3.41□□□□□ -1.86
VPS41-211ENST00000466017 TRACP01848 142 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 CHTF8P0CG12 524 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 PSMB2P49721 201 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 KRTAP10-1P60331 282 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 UBE2V1Q13404 147 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 Q1RN00 199 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 C6orf99Q4VX62 202 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 GTF2H5Q6ZYL4 71 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 DIRC1Q969H9 104 aa3.41□□□□□ -1.86
VPS41-211ENST00000466017 DYNC1H1Q14204 4646 aaKnown RBP3.41□□□□□ -1.86
VPS41-211ENST00000466017 A0A1B0GV90 55 aa3.4□□□□□ -1.87
VPS41-211ENST00000466017 H7C2G1 150 aa3.4□□□□□ -1.87
VPS41-211ENST00000466017 K7EP34 96 aa3.4□□□□□ -1.87
VPS41-211ENST00000466017 LST1O00453 97 aa3.4□□□□□ -1.87
VPS41-211ENST00000466017 SNCGO76070 127 aa3.4□□□□□ -1.87
VPS41-211ENST00000466017 ELOF1P60002 83 aaKnown RBP3.4□□□□□ -1.87
VPS41-211ENST00000466017 ATXN8Q156A1 80 aa3.4□□□□□ -1.87
VPS41-211ENST00000466017 LINC01620Q4KN68 170 aa3.4□□□□□ -1.87
VPS41-211ENST00000466017 REG3GQ6UW15 175 aa3.4□□□□□ -1.87
VPS41-211ENST00000466017 LINC00575Q6W349 94 aa3.4□□□□□ -1.87
VPS41-211ENST00000466017 FAM19A5Q7Z5A7 132 aaPredicted RBP3.4□□□□□ -1.87
VPS41-211ENST00000466017 DPH3Q96FX2 82 aa3.4□□□□□ -1.87
VPS41-211ENST00000466017 SPCS1Q9Y6A9 102 aa3.4□□□□□ -1.87
VPS41-211ENST00000466017 HECTD4Q9Y4D8 3996 aa3.4□□□□□ -1.87
VPS41-211ENST00000466017 F8W1H4 67 aa3.39□□□□□ -1.87
VPS41-211ENST00000466017 TCL1BO95988 128 aa3.39□□□□□ -1.87
VPS41-211ENST00000466017 COX7BP24311 80 aa3.39□□□□□ -1.87
VPS41-211ENST00000466017 OCIAD2Q56VL3 154 aa3.39□□□□□ -1.87
VPS41-211ENST00000466017 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
VPS41-211ENST00000466017 PHF5AQ7RTV0 110 aaKnown RBP3.39□□□□□ -1.87
VPS41-211ENST00000466017 NAA38Q9BRA0 125 aaKnown RBP3.39□□□□□ -1.87
VPS41-211ENST00000466017 KMT2CQ8NEZ4 4911 aaKnown RBP3.39□□□□□ -1.87
VPS41-211ENST00000466017 LRP1BQ9NZR2 4599 aa3.39□□□□□ -1.87
VPS41-211ENST00000466017 PKD1P98161 4303 aa3.38□□□□□ -1.87
VPS41-211ENST00000466017 RPL37AP8A6NKH3 93 aa3.38□□□□□ -1.87
VPS41-211ENST00000466017 SLC25A20O43772 301 aa3.38□□□□□ -1.87
VPS41-211ENST00000466017 BCE1O60756 84 aa3.38□□□□□ -1.87
VPS41-211ENST00000466017 FUSP35637 526 aaKnown RBP eCLIP3.38□□□□□ -1.87
VPS41-211ENST00000466017 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.38□□□□□ -1.87
VPS41-211ENST00000466017 Q6ZRX8 168 aa3.38□□□□□ -1.87
VPS41-211ENST00000466017 CIRBP-AS1Q8TBR5 109 aa3.38□□□□□ -1.87
VPS41-211ENST00000466017 DHRS4-AS1Q9P1J3 65 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms