RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 KRTAP13-2Q52LG2 175 aa15.27■□□□□ 0.04
SMC4-206ENST00000465903 SMCR5Q8TEV8 140 aa15.26■□□□□ 0.03
SMC4-206ENST00000465903 TRAV23DV6A0A075B6W5 121 aa15.24■□□□□ 0.03
SMC4-206ENST00000465903 HSBP1L1C9JCN9 74 aa15.23■□□□□ 0.03
SMC4-206ENST00000465903 SCGB1D1O95968 90 aa15.23■□□□□ 0.03
SMC4-206ENST00000465903 TYMSOSQ8TAI1 123 aa15.23■□□□□ 0.03
SMC4-206ENST00000465903 SPRR4Q96PI1 79 aa15.23■□□□□ 0.03
SMC4-206ENST00000465903 IFITM1P13164 125 aa15.21■□□□□ 0.03
SMC4-206ENST00000465903 Q6ZVH6 145 aa15.21■□□□□ 0.03
SMC4-206ENST00000465903 PPDPFQ9H3Y8 114 aa15.21■□□□□ 0.03
SMC4-206ENST00000465903 Q6ZRX8 168 aa15.2■□□□□ 0.02
SMC4-206ENST00000465903 OR13C6PQ8NH95 151 aa15.2■□□□□ 0.02
SMC4-206ENST00000465903 Q9BRP9 147 aa15.2■□□□□ 0.02
SMC4-206ENST00000465903 ZNF73O43830 326 aaPredicted RBP15.19■□□□□ 0.02
SMC4-206ENST00000465903 MUSTN1Q8IVN3 82 aa15.19■□□□□ 0.02
SMC4-206ENST00000465903 ERC2-IT1O76042 136 aa15.18■□□□□ 0.02
SMC4-206ENST00000465903 LINC00518Q8N0U6 118 aa15.18■□□□□ 0.02
SMC4-206ENST00000465903 ZNF706Q9Y5V0 76 aaPredicted RBP15.16■□□□□ 0.02
SMC4-206ENST00000465903 C3orf22Q8N5N4 141 aa15.15■□□□□ 0.02
SMC4-206ENST00000465903 COPS9Q8WXC6 57 aa15.15■□□□□ 0.02
SMC4-206ENST00000465903 CBY1Q9Y3M2 126 aa15.15■□□□□ 0.02
SMC4-206ENST00000465903 JOSD1Q15040 202 aaPredicted RBP15.1■□□□□ 0.01
SMC4-206ENST00000465903 LINC00483Q53H64 154 aa15.1■□□□□ 0.01
SMC4-206ENST00000465903 LRP2P98164 4655 aa15.1■□□□□ 0.01
SMC4-206ENST00000465903 TSPAN13O95857 204 aa15.09■□□□□ 0.01
SMC4-206ENST00000465903 GAGE2AQ6NT46 116 aa15.08■□□□□ 0
SMC4-206ENST00000465903 COX8AP10176 69 aa15.07■□□□□ 0
SMC4-206ENST00000465903 HINT1P49773 126 aaPredicted RBP15.07■□□□□ 0
SMC4-206ENST00000465903 LINC00304Q8N9R0 145 aa15.06■□□□□ 0
SMC4-206ENST00000465903 C6orf99Q4VX62 202 aa15.05■□□□□ -0
SMC4-206ENST00000465903 UBR4Q5T4S7 5183 aa15.05■□□□□ -0
SMC4-206ENST00000465903 A6NDN8 102 aa15.03■□□□□ -0
SMC4-206ENST00000465903 DLEU1O43261 78 aa15.02■□□□□ -0
SMC4-206ENST00000465903 ELOF1P60002 83 aaKnown RBP15.01□□□□□ -0.01
SMC4-206ENST00000465903 ST20-AS1Q8NBB2 130 aa15.01□□□□□ -0.01
SMC4-206ENST00000465903 COX7BP24311 80 aa15□□□□□ -0.01
SMC4-206ENST00000465903 PAM16Q9Y3D7 125 aa15□□□□□ -0.01
SMC4-206ENST00000465903 LPAP08519 4548 aa15□□□□□ -0.01
SMC4-206ENST00000465903 TRAV13-2A0A0B4J235 113 aa14.99□□□□□ -0.01
SMC4-206ENST00000465903 SPATA45Q537H7 98 aa14.99□□□□□ -0.01
SMC4-206ENST00000465903 C14orf144Q96I85 54 aa14.99□□□□□ -0.01
SMC4-206ENST00000465903 A4D1N5 150 aa14.98□□□□□ -0.01
SMC4-206ENST00000465903 TRBV7-6A0A0J9YX20 115 aa14.97□□□□□ -0.01
SMC4-206ENST00000465903 DHRS4-AS1Q9P1J3 65 aa14.97□□□□□ -0.01
SMC4-206ENST00000465903 VAMP8Q9BV40 100 aa14.96□□□□□ -0.01
SMC4-206ENST00000465903 TMA7Q9Y2S6 64 aaKnown RBP14.96□□□□□ -0.01
SMC4-206ENST00000465903 SMIM11BQ8TCY0 68 aa14.94□□□□□ -0.02
SMC4-206ENST00000465903 CTAG1AP78358 180 aa14.93□□□□□ -0.02
SMC4-206ENST00000465903 PRR4Q16378 134 aa14.93□□□□□ -0.02
SMC4-206ENST00000465903 Q8NBF4 154 aa14.93□□□□□ -0.02
SMC4-206ENST00000465903 HIST1H4GQ99525 98 aa14.93□□□□□ -0.02
SMC4-206ENST00000465903 A0A1B0GWB2 263 aa14.92□□□□□ -0.02
SMC4-206ENST00000465903 PYY3Q5JQD4 70 aa14.92□□□□□ -0.02
SMC4-206ENST00000465903 IGLV9-49A0A0B4J1Y8 123 aa14.91□□□□□ -0.02
SMC4-206ENST00000465903 SPAG11AQ6PDA7 123 aa14.91□□□□□ -0.02
SMC4-206ENST00000465903 SPRR1BP22528 89 aa14.9□□□□□ -0.02
SMC4-206ENST00000465903 MOBPQ13875 183 aa14.9□□□□□ -0.02
SMC4-206ENST00000465903 HIGD1BQ9P298 99 aa14.9□□□□□ -0.02
SMC4-206ENST00000465903 SLC25A34Q6PIV7 304 aa14.89□□□□□ -0.03
SMC4-206ENST00000465903 SSBP3-AS1Q7Z2R9 100 aa14.89□□□□□ -0.03
SMC4-206ENST00000465903 C2orf91Q6ZV80 131 aa14.88□□□□□ -0.03
SMC4-206ENST00000465903 RETNLBQ9BQ08 111 aa14.87□□□□□ -0.03
SMC4-206ENST00000465903 C12orf57Q99622 126 aa14.85□□□□□ -0.03
SMC4-206ENST00000465903 C4orf48Q5BLP8 95 aa14.84□□□□□ -0.03
SMC4-206ENST00000465903 TAL2Q16559 108 aa14.81□□□□□ -0.04
SMC4-206ENST00000465903 LINC01547P58512 204 aaPredicted RBP14.8□□□□□ -0.04
SMC4-206ENST00000465903 C9orf153Q5TBE3 101 aa14.8□□□□□ -0.04
SMC4-206ENST00000465903 SPINK1P00995 79 aa14.79□□□□□ -0.04
SMC4-206ENST00000465903 DEFB105AQ8NG35 78 aa14.79□□□□□ -0.04
SMC4-206ENST00000465903 CFC1BP0CG36 223 aa14.78□□□□□ -0.04
SMC4-206ENST00000465903 CFC1P0CG37 223 aa14.78□□□□□ -0.04
SMC4-206ENST00000465903 TEX49A0A1B0GTD5 131 aa14.77□□□□□ -0.05
SMC4-206ENST00000465903 VAMP3Q15836 100 aa14.77□□□□□ -0.05
SMC4-206ENST00000465903 IGLV5-48A0A075B6I7 105 aa14.76□□□□□ -0.05
SMC4-206ENST00000465903 LAMTOR3Q9UHA4 124 aa14.76□□□□□ -0.05
SMC4-206ENST00000465903 LINC00575Q6W349 94 aa14.75□□□□□ -0.05
SMC4-206ENST00000465903 SMIM29Q86T20 159 aa14.75□□□□□ -0.05
SMC4-206ENST00000465903 NHP2Q9NX24 153 aaKnown RBP14.75□□□□□ -0.05
SMC4-206ENST00000465903 CEND1Q8N111 149 aa14.74□□□□□ -0.05
SMC4-206ENST00000465903 Q1RN00 199 aa14.72□□□□□ -0.05
SMC4-206ENST00000465903 RPS29P62273 56 aaKnown RBP14.71□□□□□ -0.05
SMC4-206ENST00000465903 A0A0B4J2C4 111 aa14.7□□□□□ -0.06
SMC4-206ENST00000465903 Q8N377 158 aa14.7□□□□□ -0.06
SMC4-206ENST00000465903 IGLV7-46A0A075B6I9 117 aa14.69□□□□□ -0.06
SMC4-206ENST00000465903 SLC25A20O43772 301 aa14.69□□□□□ -0.06
SMC4-206ENST00000465903 RAB37Q96AX2 223 aa14.69□□□□□ -0.06
SMC4-206ENST00000465903 hADV29S1A0JD25 119 aa14.67□□□□□ -0.06
SMC4-206ENST00000465903 H7C2G1 150 aa14.67□□□□□ -0.06
SMC4-206ENST00000465903 FXYD2P54710 66 aa14.67□□□□□ -0.06
SMC4-206ENST00000465903 BVES-AS1Q5T3Y7 98 aa14.66□□□□□ -0.06
SMC4-206ENST00000465903 Q6ZQY7 126 aa14.63□□□□□ -0.07
SMC4-206ENST00000465903 TPRXLQ17RH7 258 aa14.62□□□□□ -0.07
SMC4-206ENST00000465903 FP248Q71RG6 208 aaPredicted RBP14.62□□□□□ -0.07
SMC4-206ENST00000465903 PRO1933Q9H354 126 aa14.61□□□□□ -0.07
SMC4-206ENST00000465903 RNF213Q63HN8 5207 aa14.61□□□□□ -0.07
SMC4-206ENST00000465903 TMEM238LA0A1B0GVL6 79 aa14.6□□□□□ -0.07
SMC4-206ENST00000465903 A6NJY4 79 aa14.6□□□□□ -0.07
SMC4-206ENST00000465903 UQCR10Q9UDW1 63 aa14.6□□□□□ -0.07
SMC4-206ENST00000465903 HSD52Q0P140 79 aa14.59□□□□□ -0.07
SMC4-206ENST00000465903 HRCT1Q6UXD1 115 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms