RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 Q8IZM0 81 aa1.76□□□□□ -2.13
SNX4-202ENST00000465505 Q8N9L7 120 aa1.76□□□□□ -2.13
SNX4-202ENST00000465505 A0A096LNT2 108 aa1.75□□□□□ -2.13
SNX4-202ENST00000465505 INE1O15225 51 aa1.75□□□□□ -2.13
SNX4-202ENST00000465505 KRTAP10-10P60014 251 aa1.75□□□□□ -2.13
SNX4-202ENST00000465505 C10orf55Q5SWW7 151 aa1.75□□□□□ -2.13
SNX4-202ENST00000465505 CCL19Q99731 98 aa1.75□□□□□ -2.13
SNX4-202ENST00000465505 TPRP12270 2363 aaKnown RBP1.74□□□□□ -2.13
SNX4-202ENST00000465505 LYNX1G3V0Z9 82 aa1.74□□□□□ -2.13
SNX4-202ENST00000465505 ANGP03950 147 aaKnown RBP1.74□□□□□ -2.13
SNX4-202ENST00000465505 RPS27P42677 84 aaKnown RBP1.74□□□□□ -2.13
SNX4-202ENST00000465505 PRCDQ00LT1 54 aa1.74□□□□□ -2.13
SNX4-202ENST00000465505 LINC00575Q6W349 94 aa1.74□□□□□ -2.13
SNX4-202ENST00000465505 WNK2Q9Y3S1 2297 aa1.74□□□□□ -2.13
SNX4-202ENST00000465505 PIGYQ3MUY2 71 aa1.73□□□□□ -2.13
SNX4-202ENST00000465505 CDKN2A-AS1Q9UH64 79 aa1.73□□□□□ -2.13
SNX4-202ENST00000465505 G3V318 75 aa1.72□□□□□ -2.13
SNX4-202ENST00000465505 CCL22O00626 93 aa1.72□□□□□ -2.13
SNX4-202ENST00000465505 RPL39P62891 51 aaKnown RBP1.72□□□□□ -2.13
SNX4-202ENST00000465505 NAV3Q8IVL0 2385 aa1.72□□□□□ -2.13
SNX4-202ENST00000465505 ACYP2P14621 99 aa1.71□□□□□ -2.14
SNX4-202ENST00000465505 DEFB106AQ8N104 65 aa1.71□□□□□ -2.14
SNX4-202ENST00000465505 IGF2RP11717 2491 aa1.71□□□□□ -2.14
SNX4-202ENST00000465505 GPR179Q6PRD1 2367 aa1.7□□□□□ -2.14
SNX4-202ENST00000465505 IGLV5-48A0A075B6I7 105 aa1.7□□□□□ -2.14
SNX4-202ENST00000465505 H3BRN7 92 aa1.7□□□□□ -2.14
SNX4-202ENST00000465505 I3L2K1 104 aa1.7□□□□□ -2.14
SNX4-202ENST00000465505 C10orf99Q6UWK7 81 aa1.7□□□□□ -2.14
SNX4-202ENST00000465505 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.7□□□□□ -2.14
SNX4-202ENST00000465505 RPL39LQ96EH5 51 aaKnown RBP1.7□□□□□ -2.14
SNX4-202ENST00000465505 PRO3102Q9H379 93 aa1.7□□□□□ -2.14
SNX4-202ENST00000465505 ZDBF2Q9HCK1 2354 aa1.69□□□□□ -2.14
SNX4-202ENST00000465505 SPINK9Q5DT21 86 aa1.69□□□□□ -2.14
SNX4-202ENST00000465505 TP53AIP1Q9HCN2 124 aa1.69□□□□□ -2.14
SNX4-202ENST00000465505 PRB1P04280 392 aa1.68□□□□□ -2.14
SNX4-202ENST00000465505 Q6ZRX8 168 aa1.68□□□□□ -2.14
SNX4-202ENST00000465505 PLAC4Q8WY50 150 aa1.68□□□□□ -2.14
SNX4-202ENST00000465505 FAM208BQ5VWN6 2430 aa1.67□□□□□ -2.14
SNX4-202ENST00000465505 PKDREJQ9NTG1 2253 aa1.67□□□□□ -2.14
SNX4-202ENST00000465505 GVQW2A0A096LPI5 108 aaPredicted RBP1.67□□□□□ -2.14
SNX4-202ENST00000465505 SPTY2D1-AS1A0A0U1RR47 76 aa1.67□□□□□ -2.14
SNX4-202ENST00000465505 Q6ZRN7 208 aaPredicted RBP1.67□□□□□ -2.14
SNX4-202ENST00000465505 SSBP3-AS1Q7Z2R9 100 aa1.67□□□□□ -2.14
SNX4-202ENST00000465505 FLG2Q5D862 2391 aaPredicted RBP1.67□□□□□ -2.14
SNX4-202ENST00000465505 HIVEP2P31629 2446 aa1.66□□□□□ -2.14
SNX4-202ENST00000465505 IGKV2-24A0A0C4DH68 120 aa1.66□□□□□ -2.14
SNX4-202ENST00000465505 K7EQZ3 153 aa1.66□□□□□ -2.14
SNX4-202ENST00000465505 M0QY20 66 aa1.66□□□□□ -2.14
SNX4-202ENST00000465505 DEFB134Q4QY38 66 aa1.66□□□□□ -2.14
SNX4-202ENST00000465505 COX6B2Q6YFQ2 88 aa1.66□□□□□ -2.14
SNX4-202ENST00000465505 PTPRZ1P23471 2315 aaPredicted RBP1.66□□□□□ -2.14
SNX4-202ENST00000465505 OTOGLQ3ZCN5 2332 aa1.66□□□□□ -2.14
SNX4-202ENST00000465505 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.15
SNX4-202ENST00000465505 SPRR5A0A1B0GTR4 108 aa1.64□□□□□ -2.15
SNX4-202ENST00000465505 H0YAA0 97 aa1.64□□□□□ -2.15
SNX4-202ENST00000465505 TMEM167AQ8TBQ9 72 aa1.64□□□□□ -2.15
SNX4-202ENST00000465505 PIEZO2Q9H5I5 2752 aa1.64□□□□□ -2.15
SNX4-202ENST00000465505 CACNA1GO43497 2377 aa1.63□□□□□ -2.15
SNX4-202ENST00000465505 PRB3Q04118 309 aaPredicted RBP1.63□□□□□ -2.15
SNX4-202ENST00000465505 PCNX1Q96RV3 2341 aa1.63□□□□□ -2.15
SNX4-202ENST00000465505 COX6A2Q02221 97 aa1.62□□□□□ -2.15
SNX4-202ENST00000465505 WT1-ASQ06250 92 aa1.62□□□□□ -2.15
SNX4-202ENST00000465505 IGFL1Q6UW32 110 aa1.62□□□□□ -2.15
SNX4-202ENST00000465505 C6orf48Q9UBA6 75 aa1.62□□□□□ -2.15
SNX4-202ENST00000465505 SPTBN1Q01082 2364 aaKnown RBP1.61□□□□□ -2.15
SNX4-202ENST00000465505 MINOS1Q5TGZ0 78 aa1.61□□□□□ -2.15
SNX4-202ENST00000465505 LEAP2Q969E1 77 aa1.61□□□□□ -2.15
SNX4-202ENST00000465505 ACACAQ13085 2346 aa1.61□□□□□ -2.15
SNX4-202ENST00000465505 CSPG4Q6UVK1 2322 aa1.61□□□□□ -2.15
SNX4-202ENST00000465505 A0A0C4DFX4 3053 aa1.6□□□□□ -2.15
SNX4-202ENST00000465505 DEFB123Q8N688 67 aa1.6□□□□□ -2.15
SNX4-202ENST00000465505 MGAQ8IWI9 3026 aa1.6□□□□□ -2.15
SNX4-202ENST00000465505 K7EIM0 57 aa1.59□□□□□ -2.15
SNX4-202ENST00000465505 DEFB131AP59861 70 aa1.59□□□□□ -2.15
SNX4-202ENST00000465505 PCOTHQ58A44 107 aa1.59□□□□□ -2.15
SNX4-202ENST00000465505 Q6ZSA8 131 aa1.59□□□□□ -2.15
SNX4-202ENST00000465505 MRPL34Q9BQ48 92 aaKnown RBP1.59□□□□□ -2.15
SNX4-202ENST00000465505 JMJD1CQ15652 2540 aa1.59□□□□□ -2.16
SNX4-202ENST00000465505 MMP24-AS1A0A0U1RRL7 71 aa1.58□□□□□ -2.16
SNX4-202ENST00000465505 LYNX1P0DP58 116 aa1.58□□□□□ -2.16
SNX4-202ENST00000465505 RPL37P61927 97 aaKnown RBP1.58□□□□□ -2.16
SNX4-202ENST00000465505 KLK9Q2XQG4 91 aa1.58□□□□□ -2.16
SNX4-202ENST00000465505 KRTAP13-2Q52LG2 175 aa1.58□□□□□ -2.16
SNX4-202ENST00000465505 WFDC13Q8IUB5 93 aa1.58□□□□□ -2.16
SNX4-202ENST00000465505 CRIPTQ9P021 101 aa1.58□□□□□ -2.16
SNX4-202ENST00000465505 ROS1P08922 2347 aa1.58□□□□□ -2.16
SNX4-202ENST00000465505 SPTA1P02549 2419 aa1.58□□□□□ -2.16
SNX4-202ENST00000465505 WNK1Q9H4A3 2382 aa1.57□□□□□ -2.16
SNX4-202ENST00000465505 REV3LO60673 3130 aa1.57□□□□□ -2.16
SNX4-202ENST00000465505 SPINK13Q1W4C9 94 aa1.57□□□□□ -2.16
SNX4-202ENST00000465505 RPL39P5Q59GN2 51 aa1.56□□□□□ -2.16
SNX4-202ENST00000465505 PRR9Q5T870 116 aa1.56□□□□□ -2.16
SNX4-202ENST00000465505 AKAP6Q13023 2319 aa1.56□□□□□ -2.16
SNX4-202ENST00000465505 CHD7Q9P2D1 2997 aa1.56□□□□□ -2.16
SNX4-202ENST00000465505 WFDC10BQ8IUB3 73 aa1.55□□□□□ -2.16
SNX4-202ENST00000465505 USMG5Q96IX5 58 aa1.55□□□□□ -2.16
SNX4-202ENST00000465505 C2CD3Q4AC94 2353 aa1.55□□□□□ -2.16
SNX4-202ENST00000465505 ZNF462Q96JM2 2506 aa1.55□□□□□ -2.16
SNX4-202ENST00000465505 SPTBN2O15020 2390 aa1.54□□□□□ -2.16
SNX4-202ENST00000465505 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms