RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 Q6ZQY7 126 aa2.1□□□□□ -2.07
VPS8-217ENST00000465213 Q96NJ1 140 aa2.1□□□□□ -2.07
VPS8-217ENST00000465213 GNG13Q9P2W3 67 aa2.1□□□□□ -2.07
VPS8-217ENST00000465213 CRYBG1Q9Y4K1 1723 aa2.1□□□□□ -2.07
VPS8-217ENST00000465213 TOP2AP11388 1531 aaKnown RBP2.1□□□□□ -2.07
VPS8-217ENST00000465213 PCDH15Q96QU1 1955 aa2.1□□□□□ -2.07
VPS8-217ENST00000465213 EP300Q09472 2414 aaPredicted RBP2.1□□□□□ -2.07
VPS8-217ENST00000465213 COL5A1P20908 1838 aaPredicted RBP2.1□□□□□ -2.07
VPS8-217ENST00000465213 NHSQ6T4R5 1651 aa2.09□□□□□ -2.07
VPS8-217ENST00000465213 PRXQ9BXM0 1461 aa2.09□□□□□ -2.07
VPS8-217ENST00000465213 TRGV2A0A075B6R0 118 aa2.09□□□□□ -2.07
VPS8-217ENST00000465213 H0Y9P7 68 aa2.09□□□□□ -2.07
VPS8-217ENST00000465213 H3BVH4 76 aa2.09□□□□□ -2.07
VPS8-217ENST00000465213 IGKV4-1P06312 121 aa2.09□□□□□ -2.07
VPS8-217ENST00000465213 SPATA8Q6RVD6 105 aa2.09□□□□□ -2.07
VPS8-217ENST00000465213 C10orf99Q6UWK7 81 aa2.09□□□□□ -2.07
VPS8-217ENST00000465213 SAMD9Q5K651 1589 aa2.09□□□□□ -2.08
VPS8-217ENST00000465213 CRYBG3Q68DQ2 2970 aa2.09□□□□□ -2.08
VPS8-217ENST00000465213 PKD1L3Q7Z443 1732 aa2.08□□□□□ -2.08
VPS8-217ENST00000465213 TLN2Q9Y4G6 2542 aa2.08□□□□□ -2.08
VPS8-217ENST00000465213 FXYD6-FXYD2A0A087WZ82 144 aa2.08□□□□□ -2.08
VPS8-217ENST00000465213 TRGV1A0A0A0MS02 117 aa2.08□□□□□ -2.08
VPS8-217ENST00000465213 TRAV1-2A0A0B4J238 106 aa2.08□□□□□ -2.08
VPS8-217ENST00000465213 HMGA1P17096 107 aaKnown RBP2.08□□□□□ -2.08
VPS8-217ENST00000465213 FDCSPQ8NFU4 85 aa2.08□□□□□ -2.08
VPS8-217ENST00000465213 TMEM263Q8WUH6 116 aaKnown RBP2.08□□□□□ -2.08
VPS8-217ENST00000465213 SLIT1O75093 1534 aa2.07□□□□□ -2.08
VPS8-217ENST00000465213 FREM2Q5SZK8 3169 aa2.07□□□□□ -2.08
VPS8-217ENST00000465213 COL4A1P02462 1669 aa2.07□□□□□ -2.08
VPS8-217ENST00000465213 PRB1P04280 392 aa2.07□□□□□ -2.08
VPS8-217ENST00000465213 CCL19Q99731 98 aa2.07□□□□□ -2.08
VPS8-217ENST00000465213 MYO15AQ9UKN7 3530 aa2.07□□□□□ -2.08
VPS8-217ENST00000465213 MYO7AQ13402 2215 aa2.07□□□□□ -2.08
VPS8-217ENST00000465213 DNAJC13O75165 2243 aa2.06□□□□□ -2.08
VPS8-217ENST00000465213 ALS2Q96Q42 1657 aa2.06□□□□□ -2.08
VPS8-217ENST00000465213 EPPK1P58107 5090 aaKnown RBP2.06□□□□□ -2.08
VPS8-217ENST00000465213 HIVEP3Q5T1R4 2406 aa2.06□□□□□ -2.08
VPS8-217ENST00000465213 SNRPGP15A8MWD9 76 aa2.06□□□□□ -2.08
VPS8-217ENST00000465213 ACYP2P14621 99 aa2.06□□□□□ -2.08
VPS8-217ENST00000465213 DEFB107AQ8IZN7 70 aa2.06□□□□□ -2.08
VPS8-217ENST00000465213 LINC00472Q9H8W2 130 aa2.06□□□□□ -2.08
VPS8-217ENST00000465213 ANKRD36A6QL64 1941 aa2.06□□□□□ -2.08
VPS8-217ENST00000465213 UTP20O75691 2785 aaKnown RBP2.06□□□□□ -2.08
VPS8-217ENST00000465213 OTOGLQ3ZCN5 2332 aa2.06□□□□□ -2.08
VPS8-217ENST00000465213 SDK1Q7Z5N4 2213 aa2.05□□□□□ -2.08
VPS8-217ENST00000465213 ICE1Q9Y2F5 2266 aa2.05□□□□□ -2.08
VPS8-217ENST00000465213 F8P00451 2351 aa2.05□□□□□ -2.08
VPS8-217ENST00000465213 UNQ6190/PRO20217Q6UXQ8 127 aa2.05□□□□□ -2.08
VPS8-217ENST00000465213 LAMC1P11047 1609 aa2.05□□□□□ -2.08
VPS8-217ENST00000465213 C5P01031 1676 aa2.05□□□□□ -2.08
VPS8-217ENST00000465213 IFT172Q9UG01 1749 aa2.05□□□□□ -2.08
VPS8-217ENST00000465213 A0A1B0GUL6 1792 aa2.05□□□□□ -2.08
VPS8-217ENST00000465213 PTPRQQ9UMZ3 2332 aa2.05□□□□□ -2.08
VPS8-217ENST00000465213 MUC2Q02817 5179 aa2.04□□□□□ -2.08
VPS8-217ENST00000465213 FRYLO94915 3013 aa2.04□□□□□ -2.08
VPS8-217ENST00000465213 KMT2CQ8NEZ4 4911 aaKnown RBP2.04□□□□□ -2.08
VPS8-217ENST00000465213 LRRC37A2A6NM11 1700 aa2.04□□□□□ -2.08
VPS8-217ENST00000465213 EIF2AK4Q9P2K8 1649 aaKnown RBP2.03□□□□□ -2.08
VPS8-217ENST00000465213 CELSR1Q9NYQ6 3014 aa2.03□□□□□ -2.08
VPS8-217ENST00000465213 IFI6P09912 130 aa2.03□□□□□ -2.08
VPS8-217ENST00000465213 S100A3P33764 101 aa2.03□□□□□ -2.08
VPS8-217ENST00000465213 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.03□□□□□ -2.08
VPS8-217ENST00000465213 CELSR2Q9HCU4 2923 aa2.03□□□□□ -2.08
VPS8-217ENST00000465213 SPINK7P58062 85 aa2.02□□□□□ -2.09
VPS8-217ENST00000465213 C10orf113Q5VZT2 155 aa2.02□□□□□ -2.09
VPS8-217ENST00000465213 ZCCHC13Q8WW36 166 aaKnown RBP2.02□□□□□ -2.09
VPS8-217ENST00000465213 FAM103A1Q9BTL3 118 aaKnown RBP2.02□□□□□ -2.09
VPS8-217ENST00000465213 ZANQ9Y493 2812 aa2.02□□□□□ -2.09
VPS8-217ENST00000465213 SSC5DA1L4H1 1573 aa2.02□□□□□ -2.09
VPS8-217ENST00000465213 ZNF236Q9UL36 1845 aa2.01□□□□□ -2.09
VPS8-217ENST00000465213 WDFY3Q8IZQ1 3526 aa2.01□□□□□ -2.09
VPS8-217ENST00000465213 PARP4Q9UKK3 1724 aaKnown RBP2.01□□□□□ -2.09
VPS8-217ENST00000465213 A0A096LNT2 108 aa2.01□□□□□ -2.09
VPS8-217ENST00000465213 LCE6AA0A183 80 aa2.01□□□□□ -2.09
VPS8-217ENST00000465213 OBSCN-AS1Q96MR7 158 aa2.01□□□□□ -2.09
VPS8-217ENST00000465213 FXYD6Q9H0Q3 95 aa2.01□□□□□ -2.09
VPS8-217ENST00000465213 OTOGQ6ZRI0 2925 aa2.01□□□□□ -2.09
VPS8-217ENST00000465213 INTS1Q8N201 2190 aaKnown RBP2□□□□□ -2.09
VPS8-217ENST00000465213 NCOA6Q14686 2063 aaPredicted RBP2□□□□□ -2.09
VPS8-217ENST00000465213 NRAPQ86VF7 1730 aa2□□□□□ -2.09
VPS8-217ENST00000465213 TIAM2Q8IVF5 1701 aa2□□□□□ -2.09
VPS8-217ENST00000465213 TRAV21A0A0B4J279 112 aa2□□□□□ -2.09
VPS8-217ENST00000465213 TRBV30A0A0K0K1B3 111 aa2□□□□□ -2.09
VPS8-217ENST00000465213 TRBV6-1A0A0K0K1D8 114 aa2□□□□□ -2.09
VPS8-217ENST00000465213 LINC00575Q6W349 94 aa2□□□□□ -2.09
VPS8-217ENST00000465213 SMIM11BQ8TCY0 68 aa2□□□□□ -2.09
VPS8-217ENST00000465213 DMDP11532 3685 aa2□□□□□ -2.09
VPS8-217ENST00000465213 LRBAP50851 2863 aa2□□□□□ -2.09
VPS8-217ENST00000465213 NIPBLQ6KC79 2804 aaeCLIP1.99□□□□□ -2.09
VPS8-217ENST00000465213 MED13LQ71F56 2210 aa1.99□□□□□ -2.09
VPS8-217ENST00000465213 TGP01266 2768 aa1.99□□□□□ -2.09
VPS8-217ENST00000465213 TSC2P49815 1807 aa1.99□□□□□ -2.09
VPS8-217ENST00000465213 LINC01549A6NIU2 74 aa1.99□□□□□ -2.09
VPS8-217ENST00000465213 J3QRE1 110 aa1.99□□□□□ -2.09
VPS8-217ENST00000465213 PIN1P1O15428 100 aa1.99□□□□□ -2.09
VPS8-217ENST00000465213 NREPQ16612 68 aa1.99□□□□□ -2.09
VPS8-217ENST00000465213 SPINK13Q1W4C9 94 aa1.99□□□□□ -2.09
VPS8-217ENST00000465213 PLAC4Q8WY50 150 aa1.99□□□□□ -2.09
VPS8-217ENST00000465213 ABCC6O95255 1503 aa1.99□□□□□ -2.09
VPS8-217ENST00000465213 BCORQ6W2J9 1755 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms