RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 ANAPC11Q9NYG5 84 aa3.11□□□□□ -1.91
CD46-211ENST00000464082 A4D1N5 150 aa3.1□□□□□ -1.91
CD46-211ENST00000464082 M0R378 163 aa3.1□□□□□ -1.91
CD46-211ENST00000464082 KRTAP4-16G5E9R7 235 aaPredicted RBP3.09□□□□□ -1.91
CD46-211ENST00000464082 HSBP1O75506 76 aa3.09□□□□□ -1.91
CD46-211ENST00000464082 SMIM13P0DJ93 91 aa3.09□□□□□ -1.91
CD46-211ENST00000464082 RPL13AP40429 203 aaKnown RBP3.09□□□□□ -1.91
CD46-211ENST00000464082 RPL28P46779 137 aaKnown RBP3.09□□□□□ -1.91
CD46-211ENST00000464082 PRLHP81277 87 aa3.09□□□□□ -1.91
CD46-211ENST00000464082 NKAPP1Q8N9T2 125 aa3.09□□□□□ -1.91
CD46-211ENST00000464082 TMEM126AQ9H061 195 aa3.09□□□□□ -1.91
CD46-211ENST00000464082 A0A0U1RRA0 63 aa3.08□□□□□ -1.92
CD46-211ENST00000464082 C5orf52A6NGY3 159 aa3.08□□□□□ -1.92
CD46-211ENST00000464082 LEPROTL1O95214 131 aa3.08□□□□□ -1.92
CD46-211ENST00000464082 SPRR1AP35321 89 aa3.08□□□□□ -1.92
CD46-211ENST00000464082 SFTA2Q6UW10 78 aa3.08□□□□□ -1.92
CD46-211ENST00000464082 MIR7-3HGQ8N6C7 128 aa3.08□□□□□ -1.92
CD46-211ENST00000464082 LOC107984156A0A0G2JMH3 177 aa3.07□□□□□ -1.92
CD46-211ENST00000464082 CRYGAP11844 174 aa3.07□□□□□ -1.92
CD46-211ENST00000464082 LINC00158P58513 81 aa3.07□□□□□ -1.92
CD46-211ENST00000464082 RPL24P83731 157 aaKnown RBP3.07□□□□□ -1.92
CD46-211ENST00000464082 FAM229BQ4G0N7 80 aa3.07□□□□□ -1.92
CD46-211ENST00000464082 FAM19A1Q7Z5A9 133 aa3.07□□□□□ -1.92
CD46-211ENST00000464082 ARL17AQ8IVW1 177 aa3.07□□□□□ -1.92
CD46-211ENST00000464082 PLEKHB2Q96CS7 222 aa3.07□□□□□ -1.92
CD46-211ENST00000464082 PMCHL2Q9BQD1 86 aa3.07□□□□□ -1.92
CD46-211ENST00000464082 NDUFA12Q9UI09 145 aa3.07□□□□□ -1.92
CD46-211ENST00000464082 H0Y8G0 127 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 NCR3O14931 201 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 LEPROTO15243 131 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 HIST1H2BKO60814 126 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 HIST1H2BJP06899 126 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 FABP4P15090 132 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 HIST1H2BOP23527 126 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 HIST1H2BBP33778 126 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 UBE2AP49459 152 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 HIST1H2BDP58876 126 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 HIST1H2BCP62807 126 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 HERV-K104P63124 156 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 MUC2Q02817 5179 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 HIST2H2BEQ16778 126 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.06□□□□□ -1.92
CD46-211ENST00000464082 SOSTDC1Q6X4U4 206 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 C3orf22Q8N5N4 141 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 DAND5Q8N907 189 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 TYMSOSQ8TAI1 123 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 HIST1H2BHQ93079 126 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 HIST1H2BNQ99877 126 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 HIST1H2BMQ99879 126 aa3.06□□□□□ -1.92
CD46-211ENST00000464082 MUC17Q685J3 4493 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 IGKV2D-26A0A0A0MRZ7 120 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 TRBV10-3A0A0K0K1G6 114 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 MYMXA0A1B0GTQ4 84 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 J3QQQ9 107 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 DPM2O94777 84 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 TSPAN13O95857 204 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 MEIG1Q5JSS6 88 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 NOTCH2NLQ7Z3S9 236 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 BOD1L2Q8IYS8 172 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 SMCR5Q8TEV8 140 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 SPRR4Q96PI1 79 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 KCNQ1DNQ9H478 68 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 HSPB8Q9UJY1 196 aa3.05□□□□□ -1.92
CD46-211ENST00000464082 E9PLD3 99 aa3.04□□□□□ -1.92
CD46-211ENST00000464082 SYS1-DBNDD2H3BUS1 97 aa3.04□□□□□ -1.92
CD46-211ENST00000464082 ERC2-IT1O76042 136 aa3.04□□□□□ -1.92
CD46-211ENST00000464082 IGKCP01834 107 aa3.04□□□□□ -1.92
CD46-211ENST00000464082 PLNP26678 52 aa3.04□□□□□ -1.92
CD46-211ENST00000464082 PRR4Q16378 134 aa3.04□□□□□ -1.92
CD46-211ENST00000464082 ADAMTSL4-AS1Q5T5F5 129 aa3.04□□□□□ -1.92
CD46-211ENST00000464082 LINC00337Q8N6G1 96 aa3.04□□□□□ -1.92
CD46-211ENST00000464082 RETNLBQ9BQ08 111 aa3.04□□□□□ -1.92
CD46-211ENST00000464082 Q9BRP9 147 aa3.04□□□□□ -1.92
CD46-211ENST00000464082 HIGD2AQ9BW72 106 aa3.04□□□□□ -1.92
CD46-211ENST00000464082 A0A0J9YXY3 114 aa3.03□□□□□ -1.92
CD46-211ENST00000464082 TRBV10-2A0A0K0K1G8 114 aa3.03□□□□□ -1.92
CD46-211ENST00000464082 IGLV6-57P01721 117 aa3.03□□□□□ -1.92
CD46-211ENST00000464082 LINC00483Q53H64 154 aa3.03□□□□□ -1.92
CD46-211ENST00000464082 COA6Q5JTJ3 125 aaKnown RBP3.03□□□□□ -1.92
CD46-211ENST00000464082 LINC01545Q5VT33 79 aa3.03□□□□□ -1.92
CD46-211ENST00000464082 LINC00304Q8N9R0 145 aa3.03□□□□□ -1.92
CD46-211ENST00000464082 TTTY13Q9BZ97 58 aa3.03□□□□□ -1.92
CD46-211ENST00000464082 LINC00587B1AMM8 73 aa3.02□□□□□ -1.93
CD46-211ENST00000464082 NDUFC2O95298 119 aa3.02□□□□□ -1.93
CD46-211ENST00000464082 C3orf79P0CE67 100 aa3.02□□□□□ -1.93
CD46-211ENST00000464082 NMUP48645 174 aa3.02□□□□□ -1.93
CD46-211ENST00000464082 MAP1LC3CQ9BXW4 147 aa3.02□□□□□ -1.93
CD46-211ENST00000464082 LGALS3P17931 250 aaKnown RBP3.01□□□□□ -1.93
CD46-211ENST00000464082 DDTP30046 118 aa3.01□□□□□ -1.93
CD46-211ENST00000464082 HERVK_113P61574 105 aa3.01□□□□□ -1.93
CD46-211ENST00000464082 CTAG1AP78358 180 aa3.01□□□□□ -1.93
CD46-211ENST00000464082 Q6ZRX8 168 aa3.01□□□□□ -1.93
CD46-211ENST00000464082 SPANXB1Q9NS25 103 aaPredicted RBP3.01□□□□□ -1.93
CD46-211ENST00000464082 ATP6V1G1O75348 118 aa3□□□□□ -1.93
CD46-211ENST00000464082 NPC2P61916 151 aa3□□□□□ -1.93
CD46-211ENST00000464082 TPRXLQ17RH7 258 aa3□□□□□ -1.93
CD46-211ENST00000464082 Q8NBF4 154 aa3□□□□□ -1.93
CD46-211ENST00000464082 PPDPFQ9H3Y8 114 aa3□□□□□ -1.93
CD46-211ENST00000464082 TRAV23DV6A0A075B6W5 121 aa2.99□□□□□ -1.93
CD46-211ENST00000464082 ETDCA0A1B0GVM5 59 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms