RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 A8MWP4 228 aa8.9□□□□□ -0.99
CHRNA4-202ENST00000463705 KRTAP1-1Q07627 177 aa8.89□□□□□ -0.99
CHRNA4-202ENST00000463705 PLA2G1BP04054 148 aaKnown RBP8.88□□□□□ -0.99
CHRNA4-202ENST00000463705 RPS28P62857 69 aaKnown RBP8.87□□□□□ -0.99
CHRNA4-202ENST00000463705 ERC2-IT1O76042 136 aa8.87□□□□□ -0.99
CHRNA4-202ENST00000463705 RPL37AP61513 92 aaKnown RBP8.86□□□□□ -0.99
CHRNA4-202ENST00000463705 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
CHRNA4-202ENST00000463705 RANBP2P49792 3224 aaKnown RBP8.85□□□□□ -0.99
CHRNA4-202ENST00000463705 C9orf129Q5T035 196 aaKnown RBP8.85□□□□□ -0.99
CHRNA4-202ENST00000463705 A0A1B0GU69 56 aa8.84□□□□□ -0.99
CHRNA4-202ENST00000463705 ZNF575Q86XF7 245 aa8.84□□□□□ -0.99
CHRNA4-202ENST00000463705 A0A087WTM6 91 aa8.82□□□□□ -1
CHRNA4-202ENST00000463705 C9orf163Q8N9P6 203 aa8.82□□□□□ -1
CHRNA4-202ENST00000463705 MRPL34Q9BQ48 92 aaKnown RBP8.82□□□□□ -1
CHRNA4-202ENST00000463705 IGFL1Q6UW32 110 aa8.81□□□□□ -1
CHRNA4-202ENST00000463705 TRANK1O15050 2925 aa8.81□□□□□ -1
CHRNA4-202ENST00000463705 SSBP3-AS1Q7Z2R9 100 aa8.81□□□□□ -1
CHRNA4-202ENST00000463705 ZNF861PO60384 105 aa8.8□□□□□ -1
CHRNA4-202ENST00000463705 K7EQZ3 153 aa8.8□□□□□ -1
CHRNA4-202ENST00000463705 FLNAP21333 2647 aaKnown RBP8.8□□□□□ -1
CHRNA4-202ENST00000463705 CNBPP62633 177 aaKnown RBP8.79□□□□□ -1
CHRNA4-202ENST00000463705 APLNQ9ULZ1 77 aa8.79□□□□□ -1
CHRNA4-202ENST00000463705 Q96NJ1 140 aa8.78□□□□□ -1
CHRNA4-202ENST00000463705 Q8N377 158 aa8.78□□□□□ -1
CHRNA4-202ENST00000463705 HELZ2Q9BYK8 2649 aaKnown RBP8.78□□□□□ -1
CHRNA4-202ENST00000463705 SPAG11AQ6PDA7 123 aa8.77□□□□□ -1.01
CHRNA4-202ENST00000463705 USP24Q9UPU5 2620 aa8.77□□□□□ -1.01
CHRNA4-202ENST00000463705 MGAM2Q2M2H8 2515 aa8.76□□□□□ -1.01
CHRNA4-202ENST00000463705 PRR15Q8IV56 129 aa8.75□□□□□ -1.01
CHRNA4-202ENST00000463705 IGLV5-37A0A075B6J1 123 aa8.75□□□□□ -1.01
CHRNA4-202ENST00000463705 ATP11AUNQ6ZP68 121 aa8.75□□□□□ -1.01
CHRNA4-202ENST00000463705 ITPR3Q14573 2671 aa8.75□□□□□ -1.01
CHRNA4-202ENST00000463705 PRO0628Q9UI54 55 aa8.75□□□□□ -1.01
CHRNA4-202ENST00000463705 C8orf17Q9NRJ1 99 aa8.74□□□□□ -1.01
CHRNA4-202ENST00000463705 LINC00336Q6ZUF6 198 aa8.72□□□□□ -1.01
CHRNA4-202ENST00000463705 A0A1B0GVX0 72 aa8.72□□□□□ -1.01
CHRNA4-202ENST00000463705 LINC00304Q8N9R0 145 aa8.72□□□□□ -1.01
CHRNA4-202ENST00000463705 C4orf26Q17RF5 130 aa8.7□□□□□ -1.02
CHRNA4-202ENST00000463705 IGLV7-43P04211 117 aa8.7□□□□□ -1.02
CHRNA4-202ENST00000463705 WIPF1O43516 503 aa8.69□□□□□ -1.02
CHRNA4-202ENST00000463705 LAMA3Q16787 3333 aa8.68□□□□□ -1.02
CHRNA4-202ENST00000463705 A0A1W2PNN7 141 aa8.68□□□□□ -1.02
CHRNA4-202ENST00000463705 CASC10Q5T4H9 136 aa8.67□□□□□ -1.02
CHRNA4-202ENST00000463705 MKI67P46013 3256 aaKnown RBP8.67□□□□□ -1.02
CHRNA4-202ENST00000463705 SPRR4Q96PI1 79 aa8.67□□□□□ -1.02
CHRNA4-202ENST00000463705 KLKP1Q107X0 134 aa8.67□□□□□ -1.02
CHRNA4-202ENST00000463705 CENPEQ02224 2701 aa8.66□□□□□ -1.02
CHRNA4-202ENST00000463705 ZNF292O60281 2723 aa8.66□□□□□ -1.02
CHRNA4-202ENST00000463705 ATRQ13535 2644 aa8.66□□□□□ -1.02
CHRNA4-202ENST00000463705 DSCR10P59022 87 aa8.66□□□□□ -1.02
CHRNA4-202ENST00000463705 FAM104AQ969W3 186 aa8.65□□□□□ -1.02
CHRNA4-202ENST00000463705 PSORS1C2Q9UIG4 136 aa8.65□□□□□ -1.03
CHRNA4-202ENST00000463705 COA5Q86WW8 74 aa8.65□□□□□ -1.03
CHRNA4-202ENST00000463705 CFAP46Q8IYW2 2715 aa8.64□□□□□ -1.03
CHRNA4-202ENST00000463705 LINC01600Q96MT4 127 aa8.64□□□□□ -1.03
CHRNA4-202ENST00000463705 J3QL48 77 aa8.63□□□□□ -1.03
CHRNA4-202ENST00000463705 OBSCN-AS1Q96MR7 158 aa8.62□□□□□ -1.03
CHRNA4-202ENST00000463705 IGLV5-48A0A075B6I7 105 aa8.62□□□□□ -1.03
CHRNA4-202ENST00000463705 CYP4F30PQ9H0H9 118 aa8.61□□□□□ -1.03
CHRNA4-202ENST00000463705 MGAQ8IWI9 3026 aa8.61□□□□□ -1.03
CHRNA4-202ENST00000463705 A0A0G2JQZ4 141 aa8.61□□□□□ -1.03
CHRNA4-202ENST00000463705 A0A1W2PNM2 257 aa8.6□□□□□ -1.03
CHRNA4-202ENST00000463705 BRCA2P51587 3418 aa8.57□□□□□ -1.04
CHRNA4-202ENST00000463705 MAST4O15021 2626 aa8.57□□□□□ -1.04
CHRNA4-202ENST00000463705 CFAP54Q96N23 3096 aa8.56□□□□□ -1.04
CHRNA4-202ENST00000463705 CD164Q04900 197 aa8.55□□□□□ -1.04
CHRNA4-202ENST00000463705 ANAPC11Q9NYG5 84 aa8.54□□□□□ -1.04
CHRNA4-202ENST00000463705 CR1P17927 2039 aa8.53□□□□□ -1.04
CHRNA4-202ENST00000463705 SPANXA2-OT1Q8N9U9 137 aa8.52□□□□□ -1.05
CHRNA4-202ENST00000463705 H7BZZ5 65 aa8.52□□□□□ -1.05
CHRNA4-202ENST00000463705 UQCR11O14957 56 aa8.52□□□□□ -1.05
CHRNA4-202ENST00000463705 SPINT4Q6UDR6 99 aa8.52□□□□□ -1.05
CHRNA4-202ENST00000463705 SMR3BP02814 79 aaPredicted RBP8.51□□□□□ -1.05
CHRNA4-202ENST00000463705 LAMA2P24043 3122 aaKnown RBP8.51□□□□□ -1.05
CHRNA4-202ENST00000463705 C9orf92A6NGG3 77 aa8.5□□□□□ -1.05
CHRNA4-202ENST00000463705 A8MUN3 132 aa8.49□□□□□ -1.05
CHRNA4-202ENST00000463705 IGLV8-61A0A075B6I0 122 aa8.48□□□□□ -1.05
CHRNA4-202ENST00000463705 WDFY4Q6ZS81 3184 aa8.47□□□□□ -1.05
CHRNA4-202ENST00000463705 PRUNE2Q8WUY3 3088 aa8.47□□□□□ -1.05
CHRNA4-202ENST00000463705 TNP2Q05952 138 aa8.46□□□□□ -1.05
CHRNA4-202ENST00000463705 AKAP13Q12802 2813 aa8.45□□□□□ -1.06
CHRNA4-202ENST00000463705 COX6B2Q6YFQ2 88 aa8.45□□□□□ -1.06
CHRNA4-202ENST00000463705 FAM229BQ4G0N7 80 aa8.44□□□□□ -1.06
CHRNA4-202ENST00000463705 UNC80Q8N2C7 3258 aa8.43□□□□□ -1.06
CHRNA4-202ENST00000463705 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.42□□□□□ -1.06
CHRNA4-202ENST00000463705 RBM12B-AS1Q9P1G2 102 aa8.42□□□□□ -1.06
CHRNA4-202ENST00000463705 PLAC8Q9NZF1 115 aa8.42□□□□□ -1.06
CHRNA4-202ENST00000463705 MIR22HGQ0VDD5 57 aa8.41□□□□□ -1.06
CHRNA4-202ENST00000463705 SPRR1AP35321 89 aa8.41□□□□□ -1.06
CHRNA4-202ENST00000463705 OCR1Q9BZK8 76 aa8.4□□□□□ -1.06
CHRNA4-202ENST00000463705 BAHCC1Q9P281 2608 aa8.4□□□□□ -1.07
CHRNA4-202ENST00000463705 Q8NDZ9 215 aa8.39□□□□□ -1.07
CHRNA4-202ENST00000463705 CHD6Q8TD26 2715 aa8.38□□□□□ -1.07
CHRNA4-202ENST00000463705 DSPP15924 2871 aaKnown RBP8.37□□□□□ -1.07
CHRNA4-202ENST00000463705 SETXQ7Z333 2677 aaKnown RBP8.37□□□□□ -1.07
CHRNA4-202ENST00000463705 DNAH14Q0VDD8 3507 aa8.37□□□□□ -1.07
CHRNA4-202ENST00000463705 CRIPTQ9P021 101 aa8.35□□□□□ -1.07
CHRNA4-202ENST00000463705 SPRR1BP22528 89 aa8.34□□□□□ -1.07
CHRNA4-202ENST00000463705 TEP1Q99973 2627 aaKnown RBP8.34□□□□□ -1.07
CHRNA4-202ENST00000463705 TRIOO75962 3097 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms