RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 A8MWP4 228 aa8.37□□□□□ -1.07
NUP58-206ENST00000463407 IGLV7-43P04211 117 aa8.37□□□□□ -1.07
NUP58-206ENST00000463407 LINC00528Q8N1L1 170 aa8.37□□□□□ -1.07
NUP58-206ENST00000463407 C1orf195Q5TG92 126 aa8.36□□□□□ -1.07
NUP58-206ENST00000463407 ANAPC11Q9NYG5 84 aa8.36□□□□□ -1.07
NUP58-206ENST00000463407 TLX1NBP0CAT3 122 aa8.36□□□□□ -1.07
NUP58-206ENST00000463407 DSCR10P59022 87 aa8.36□□□□□ -1.07
NUP58-206ENST00000463407 PMAIP1Q13794 54 aa8.36□□□□□ -1.07
NUP58-206ENST00000463407 TRAV22A0A0B4J277 110 aa8.36□□□□□ -1.07
NUP58-206ENST00000463407 A0A1W2PNN7 141 aa8.36□□□□□ -1.07
NUP58-206ENST00000463407 EIF4EBP3O60516 100 aaPredicted RBP8.35□□□□□ -1.07
NUP58-206ENST00000463407 SSBP3-AS1Q7Z2R9 100 aa8.35□□□□□ -1.07
NUP58-206ENST00000463407 H3BPC8 53 aa8.35□□□□□ -1.07
NUP58-206ENST00000463407 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
NUP58-206ENST00000463407 MRPL34Q9BQ48 92 aaKnown RBP8.34□□□□□ -1.07
NUP58-206ENST00000463407 PSORS1C2Q9UIG4 136 aa8.34□□□□□ -1.07
NUP58-206ENST00000463407 K7EQZ3 153 aa8.33□□□□□ -1.08
NUP58-206ENST00000463407 OBSCN-AS1Q96MR7 158 aa8.33□□□□□ -1.08
NUP58-206ENST00000463407 PLA2G2DQ9UNK4 145 aa8.33□□□□□ -1.08
NUP58-206ENST00000463407 CNBPP62633 177 aaKnown RBP8.32□□□□□ -1.08
NUP58-206ENST00000463407 TNP2Q05952 138 aa8.31□□□□□ -1.08
NUP58-206ENST00000463407 HECTD1Q9ULT8 2610 aa8.29□□□□□ -1.08
NUP58-206ENST00000463407 LOC101927531A0A1B0GV80 90 aa8.29□□□□□ -1.08
NUP58-206ENST00000463407 A0A0G2JQZ4 141 aa8.29□□□□□ -1.08
NUP58-206ENST00000463407 Q8N377 158 aa8.29□□□□□ -1.08
NUP58-206ENST00000463407 C8orf17Q9NRJ1 99 aa8.26□□□□□ -1.09
NUP58-206ENST00000463407 SPRR4Q96PI1 79 aa8.25□□□□□ -1.09
NUP58-206ENST00000463407 IGLV8-61A0A075B6I0 122 aa8.24□□□□□ -1.09
NUP58-206ENST00000463407 A0A1B0GVX0 72 aa8.24□□□□□ -1.09
NUP58-206ENST00000463407 C5orf42Q9H799 3197 aa8.24□□□□□ -1.09
NUP58-206ENST00000463407 PRR15Q8IV56 129 aa8.21□□□□□ -1.09
NUP58-206ENST00000463407 CEP350Q5VT06 3117 aa8.21□□□□□ -1.09
NUP58-206ENST00000463407 ERC2-IT1O76042 136 aa8.21□□□□□ -1.1
NUP58-206ENST00000463407 FLNBO75369 2602 aaKnown RBP8.19□□□□□ -1.1
NUP58-206ENST00000463407 CHD7Q9P2D1 2997 aa8.19□□□□□ -1.1
NUP58-206ENST00000463407 IGLV5-37A0A075B6J1 123 aa8.19□□□□□ -1.1
NUP58-206ENST00000463407 RBM12B-AS1Q9P1G2 102 aa8.19□□□□□ -1.1
NUP58-206ENST00000463407 WIPF1O43516 503 aa8.17□□□□□ -1.1
NUP58-206ENST00000463407 CR1P17927 2039 aa8.16□□□□□ -1.1
NUP58-206ENST00000463407 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.15□□□□□ -1.11
NUP58-206ENST00000463407 COA5Q86WW8 74 aa8.14□□□□□ -1.11
NUP58-206ENST00000463407 C4orf26Q17RF5 130 aa8.13□□□□□ -1.11
NUP58-206ENST00000463407 PRR26Q8N8Z3 221 aa8.11□□□□□ -1.11
NUP58-206ENST00000463407 RPS28P62857 69 aaKnown RBP8.11□□□□□ -1.11
NUP58-206ENST00000463407 A0A1W2PNM2 257 aa8.09□□□□□ -1.11
NUP58-206ENST00000463407 IGLV7-46A0A075B6I9 117 aa8.08□□□□□ -1.12
NUP58-206ENST00000463407 HTTP42858 3142 aa8.07□□□□□ -1.12
NUP58-206ENST00000463407 LINC01600Q96MT4 127 aa8.07□□□□□ -1.12
NUP58-206ENST00000463407 Q6ZSA8 131 aa8.07□□□□□ -1.12
NUP58-206ENST00000463407 CHD9Q3L8U1 2897 aa8.06□□□□□ -1.12
NUP58-206ENST00000463407 PRO0628Q9UI54 55 aa8.06□□□□□ -1.12
NUP58-206ENST00000463407 BPTFQ12830 3046 aa8.05□□□□□ -1.12
NUP58-206ENST00000463407 HELZ2Q9BYK8 2649 aaKnown RBP8.05□□□□□ -1.12
NUP58-206ENST00000463407 FAM104AQ969W3 186 aa8.05□□□□□ -1.12
NUP58-206ENST00000463407 FLNAP21333 2647 aaKnown RBP8.05□□□□□ -1.12
NUP58-206ENST00000463407 MGAM2Q2M2H8 2515 aa8.04□□□□□ -1.12
NUP58-206ENST00000463407 ITPR3Q14573 2671 aa8.03□□□□□ -1.12
NUP58-206ENST00000463407 IGLV5-48A0A075B6I7 105 aa8.02□□□□□ -1.13
NUP58-206ENST00000463407 CD164Q04900 197 aa8.02□□□□□ -1.13
NUP58-206ENST00000463407 PLAC8Q9NZF1 115 aa8.02□□□□□ -1.13
NUP58-206ENST00000463407 PRRC2CQ9Y520 2896 aaKnown RBP8.02□□□□□ -1.13
NUP58-206ENST00000463407 Q8N1X5 172 aa8.01□□□□□ -1.13
NUP58-206ENST00000463407 PCNTO95613 3336 aa8.01□□□□□ -1.13
NUP58-206ENST00000463407 KLKP1Q107X0 134 aa7.99□□□□□ -1.13
NUP58-206ENST00000463407 LCE6AA0A183 80 aa7.99□□□□□ -1.13
NUP58-206ENST00000463407 A8MUN3 132 aa7.99□□□□□ -1.13
NUP58-206ENST00000463407 USP24Q9UPU5 2620 aa7.99□□□□□ -1.13
NUP58-206ENST00000463407 LINC01554Q52M75 96 aa7.99□□□□□ -1.13
NUP58-206ENST00000463407 M0R2T5 61 aa7.98□□□□□ -1.13
NUP58-206ENST00000463407 FAM229BQ4G0N7 80 aa7.97□□□□□ -1.13
NUP58-206ENST00000463407 UQCR11O14957 56 aa7.97□□□□□ -1.13
NUP58-206ENST00000463407 Q5VSD8 79 aa7.95□□□□□ -1.14
NUP58-206ENST00000463407 CYP4F30PQ9H0H9 118 aa7.94□□□□□ -1.14
NUP58-206ENST00000463407 CFAP46Q8IYW2 2715 aa7.92□□□□□ -1.14
NUP58-206ENST00000463407 MIR22HGQ0VDD5 57 aa7.92□□□□□ -1.14
NUP58-206ENST00000463407 KRTAP1-5Q9BYS1 174 aa7.92□□□□□ -1.14
NUP58-206ENST00000463407 H7BZZ5 65 aa7.91□□□□□ -1.14
NUP58-206ENST00000463407 MKI67P46013 3256 aaKnown RBP7.9□□□□□ -1.15
NUP58-206ENST00000463407 A0A0D9SG42 100 aa7.9□□□□□ -1.15
NUP58-206ENST00000463407 SPINT4Q6UDR6 99 aa7.89□□□□□ -1.15
NUP58-206ENST00000463407 Q8NDZ9 215 aa7.88□□□□□ -1.15
NUP58-206ENST00000463407 KRTAP10-1P60331 282 aa7.88□□□□□ -1.15
NUP58-206ENST00000463407 TRANK1O15050 2925 aa7.88□□□□□ -1.15
NUP58-206ENST00000463407 KRTAP10-2P60368 255 aa7.88□□□□□ -1.15
NUP58-206ENST00000463407 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
NUP58-206ENST00000463407 ATRQ13535 2644 aa7.87□□□□□ -1.15
NUP58-206ENST00000463407 CRIPTQ9P021 101 aa7.86□□□□□ -1.15
NUP58-206ENST00000463407 RANBP2P49792 3224 aaKnown RBP7.85□□□□□ -1.15
NUP58-206ENST00000463407 SPRR1AP35321 89 aa7.83□□□□□ -1.16
NUP58-206ENST00000463407 MAST4O15021 2626 aa7.83□□□□□ -1.16
NUP58-206ENST00000463407 LAMA3Q16787 3333 aa7.83□□□□□ -1.16
NUP58-206ENST00000463407 OCR1Q9BZK8 76 aa7.81□□□□□ -1.16
NUP58-206ENST00000463407 ZCCHC13Q8WW36 166 aaKnown RBP7.8□□□□□ -1.16
NUP58-206ENST00000463407 KRTAP26-1Q6PEX3 210 aa7.79□□□□□ -1.16
NUP58-206ENST00000463407 SEC61BP60468 96 aaKnown RBP7.77□□□□□ -1.17
NUP58-206ENST00000463407 BRCA2P51587 3418 aa7.77□□□□□ -1.17
NUP58-206ENST00000463407 MMP24-AS1A0A0U1RRL7 71 aa7.76□□□□□ -1.17
NUP58-206ENST00000463407 HRES1P13985 223 aa7.75□□□□□ -1.17
NUP58-206ENST00000463407 S4R3F8 94 aa7.74□□□□□ -1.17
NUP58-206ENST00000463407 SPRR1BP22528 89 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms