RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 LINC00304Q8N9R0 145 aa10.52□□□□□ -0.73
LINC00960-201ENST00000463183 VAMP8Q9BV40 100 aa10.52□□□□□ -0.73
LINC00960-201ENST00000463183 SPANXB1Q9NS25 103 aaPredicted RBP10.52□□□□□ -0.73
LINC00960-201ENST00000463183 SPRR1AP35321 89 aa10.51□□□□□ -0.73
LINC00960-201ENST00000463183 SOSTDC1Q6X4U4 206 aa10.51□□□□□ -0.73
LINC00960-201ENST00000463183 SMCR5Q8TEV8 140 aa10.51□□□□□ -0.73
LINC00960-201ENST00000463183 SPRR4Q96PI1 79 aa10.51□□□□□ -0.73
LINC00960-201ENST00000463183 PPDPFQ9H3Y8 114 aa10.51□□□□□ -0.73
LINC00960-201ENST00000463183 PAM16Q9Y3D7 125 aa10.51□□□□□ -0.73
LINC00960-201ENST00000463183 LOC107984156A0A0G2JMH3 177 aa10.5□□□□□ -0.73
LINC00960-201ENST00000463183 EIF4EBP3O60516 100 aaPredicted RBP10.5□□□□□ -0.73
LINC00960-201ENST00000463183 SPATA45Q537H7 98 aa10.5□□□□□ -0.73
LINC00960-201ENST00000463183 ARL17AQ8IVW1 177 aa10.5□□□□□ -0.73
LINC00960-201ENST00000463183 TRBV10-2A0A0K0K1G8 114 aa10.49□□□□□ -0.73
LINC00960-201ENST00000463183 COX8AP10176 69 aa10.49□□□□□ -0.73
LINC00960-201ENST00000463183 ZNF706Q9Y5V0 76 aaPredicted RBP10.49□□□□□ -0.73
LINC00960-201ENST00000463183 TIMM17BO60830 172 aa10.48□□□□□ -0.73
LINC00960-201ENST00000463183 LITAFQ99732 161 aa10.48□□□□□ -0.73
LINC00960-201ENST00000463183 RETNLBQ9BQ08 111 aa10.48□□□□□ -0.73
LINC00960-201ENST00000463183 KRTAP4-16G5E9R7 235 aaPredicted RBP10.47□□□□□ -0.73
LINC00960-201ENST00000463183 DLEU1O43261 78 aa10.47□□□□□ -0.73
LINC00960-201ENST00000463183 SMIM6P0DI80 62 aa10.47□□□□□ -0.73
LINC00960-201ENST00000463183 B5MCH6 92 aa10.46□□□□□ -0.73
LINC00960-201ENST00000463183 NDUFC2O95298 119 aa10.46□□□□□ -0.73
LINC00960-201ENST00000463183 TRAV23DV6A0A075B6W5 121 aa10.45□□□□□ -0.74
LINC00960-201ENST00000463183 GAGE2AQ6NT46 116 aa10.44□□□□□ -0.74
LINC00960-201ENST00000463183 LINC00308Q8TCZ7 52 aa10.44□□□□□ -0.74
LINC00960-201ENST00000463183 C14orf144Q96I85 54 aa10.44□□□□□ -0.74
LINC00960-201ENST00000463183 ERC2-IT1O76042 136 aa10.43□□□□□ -0.74
LINC00960-201ENST00000463183 IGLV6-57P01721 117 aa10.43□□□□□ -0.74
LINC00960-201ENST00000463183 SCGB1D4Q6XE38 83 aa10.43□□□□□ -0.74
LINC00960-201ENST00000463183 OR13C6PQ8NH95 151 aa10.43□□□□□ -0.74
LINC00960-201ENST00000463183 Q9BRP9 147 aa10.41□□□□□ -0.74
LINC00960-201ENST00000463183 SLC25A34Q6PIV7 304 aa10.4□□□□□ -0.74
LINC00960-201ENST00000463183 Q6ZRX8 168 aa10.4□□□□□ -0.74
LINC00960-201ENST00000463183 SPANXCQ9NY87 97 aa10.4□□□□□ -0.74
LINC00960-201ENST00000463183 ZNF73O43830 326 aaPredicted RBP10.39□□□□□ -0.75
LINC00960-201ENST00000463183 Q6ZVH6 145 aa10.39□□□□□ -0.75
LINC00960-201ENST00000463183 SPANXDQ9BXN6 97 aa10.39□□□□□ -0.75
LINC00960-201ENST00000463183 IGLV9-49A0A0B4J1Y8 123 aa10.38□□□□□ -0.75
LINC00960-201ENST00000463183 C4orf48Q5BLP8 95 aa10.38□□□□□ -0.75
LINC00960-201ENST00000463183 Q8NBF4 154 aa10.38□□□□□ -0.75
LINC00960-201ENST00000463183 HIGD1BQ9P298 99 aa10.37□□□□□ -0.75
LINC00960-201ENST00000463183 HINT1P49773 126 aaPredicted RBP10.35□□□□□ -0.75
LINC00960-201ENST00000463183 C2orf91Q6ZV80 131 aa10.35□□□□□ -0.75
LINC00960-201ENST00000463183 C12orf57Q99622 126 aa10.35□□□□□ -0.75
LINC00960-201ENST00000463183 IFITM1P13164 125 aa10.34□□□□□ -0.75
LINC00960-201ENST00000463183 MOBPQ13875 183 aa10.34□□□□□ -0.75
LINC00960-201ENST00000463183 LINC00483Q53H64 154 aa10.34□□□□□ -0.75
LINC00960-201ENST00000463183 LINC00518Q8N0U6 118 aa10.34□□□□□ -0.75
LINC00960-201ENST00000463183 SPAG11AQ6PDA7 123 aa10.33□□□□□ -0.76
LINC00960-201ENST00000463183 UQCR10Q9UDW1 63 aa10.33□□□□□ -0.76
LINC00960-201ENST00000463183 CBY1Q9Y3M2 126 aa10.33□□□□□ -0.76
LINC00960-201ENST00000463183 ST20-AS1Q8NBB2 130 aa10.33□□□□□ -0.76
LINC00960-201ENST00000463183 MUSTN1Q8IVN3 82 aa10.32□□□□□ -0.76
LINC00960-201ENST00000463183 COPS9Q8WXC6 57 aa10.32□□□□□ -0.76
LINC00960-201ENST00000463183 IGLV7-46A0A075B6I9 117 aa10.31□□□□□ -0.76
LINC00960-201ENST00000463183 C9orf153Q5TBE3 101 aa10.31□□□□□ -0.76
LINC00960-201ENST00000463183 PRO1933Q9H354 126 aa10.3□□□□□ -0.76
LINC00960-201ENST00000463183 TAL2Q16559 108 aa10.28□□□□□ -0.76
LINC00960-201ENST00000463183 C6orf99Q4VX62 202 aa10.28□□□□□ -0.76
LINC00960-201ENST00000463183 HIST1H4GQ99525 98 aa10.28□□□□□ -0.76
LINC00960-201ENST00000463183 A6NDN8 102 aa10.27□□□□□ -0.77
LINC00960-201ENST00000463183 COX7BP24311 80 aa10.27□□□□□ -0.77
LINC00960-201ENST00000463183 CDIP1Q9H305 208 aa10.27□□□□□ -0.77
LINC00960-201ENST00000463183 MUC2Q02817 5179 aa10.25□□□□□ -0.77
LINC00960-201ENST00000463183 CTAG1AP78358 180 aa10.25□□□□□ -0.77
LINC00960-201ENST00000463183 SPINK1P00995 79 aa10.24□□□□□ -0.77
LINC00960-201ENST00000463183 SSBP3-AS1Q7Z2R9 100 aa10.24□□□□□ -0.77
LINC00960-201ENST00000463183 DHRS4-AS1Q9P1J3 65 aa10.24□□□□□ -0.77
LINC00960-201ENST00000463183 A4D1N5 150 aa10.22□□□□□ -0.77
LINC00960-201ENST00000463183 TSTD3H0UI37 97 aa10.22□□□□□ -0.77
LINC00960-201ENST00000463183 ELOF1P60002 83 aaKnown RBP10.22□□□□□ -0.77
LINC00960-201ENST00000463183 HSD52Q0P140 79 aa10.22□□□□□ -0.77
LINC00960-201ENST00000463183 CEND1Q8N111 149 aa10.22□□□□□ -0.77
LINC00960-201ENST00000463183 DEFB105AQ8NG35 78 aa10.22□□□□□ -0.77
LINC00960-201ENST00000463183 TPRXLQ17RH7 258 aa10.21□□□□□ -0.78
LINC00960-201ENST00000463183 Q1RN00 199 aa10.17□□□□□ -0.78
LINC00960-201ENST00000463183 HRCT1Q6UXD1 115 aa10.17□□□□□ -0.78
LINC00960-201ENST00000463183 FP248Q71RG6 208 aaPredicted RBP10.17□□□□□ -0.78
LINC00960-201ENST00000463183 LAMTOR3Q9UHA4 124 aa10.17□□□□□ -0.78
LINC00960-201ENST00000463183 TRAV13-2A0A0B4J235 113 aa10.16□□□□□ -0.78
LINC00960-201ENST00000463183 FXYD2P54710 66 aa10.16□□□□□ -0.78
LINC00960-201ENST00000463183 A0A1B0GWB2 263 aa10.15□□□□□ -0.78
LINC00960-201ENST00000463183 CFC1BP0CG36 223 aa10.15□□□□□ -0.78
LINC00960-201ENST00000463183 CFC1P0CG37 223 aa10.15□□□□□ -0.78
LINC00960-201ENST00000463183 MUC17Q685J3 4493 aa10.15□□□□□ -0.78
LINC00960-201ENST00000463183 SPRR1BP22528 89 aa10.14□□□□□ -0.79
LINC00960-201ENST00000463183 Q8N377 158 aa10.14□□□□□ -0.79
LINC00960-201ENST00000463183 TMEM238LA0A1B0GVL6 79 aa10.13□□□□□ -0.79
LINC00960-201ENST00000463183 A6NJY4 79 aa10.13□□□□□ -0.79
LINC00960-201ENST00000463183 SMIM11BQ8TCY0 68 aa10.13□□□□□ -0.79
LINC00960-201ENST00000463183 A0A0B4J2C4 111 aa10.12□□□□□ -0.79
LINC00960-201ENST00000463183 TRBV7-6A0A0J9YX20 115 aa10.12□□□□□ -0.79
LINC00960-201ENST00000463183 SLC25A20O43772 301 aa10.12□□□□□ -0.79
LINC00960-201ENST00000463183 BVES-AS1Q5T3Y7 98 aa10.12□□□□□ -0.79
LINC00960-201ENST00000463183 RPS29P62273 56 aaKnown RBP10.11□□□□□ -0.79
LINC00960-201ENST00000463183 TEX49A0A1B0GTD5 131 aa10.1□□□□□ -0.79
LINC00960-201ENST00000463183 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
LINC00960-201ENST00000463183 M0R143 59 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms