RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 C3orf79P0CE67 100 aa7.64□□□□□ -1.19
HDAC1-203ENST00000463172 NPC2P61916 151 aa7.64□□□□□ -1.19
HDAC1-203ENST00000463172 COPS9Q8WXC6 57 aa7.64□□□□□ -1.19
HDAC1-203ENST00000463172 ADAMTSL4-AS1Q5T5F5 129 aa7.63□□□□□ -1.19
HDAC1-203ENST00000463172 SPANXCQ9NY87 97 aa7.63□□□□□ -1.19
HDAC1-203ENST00000463172 Q6ZRX8 168 aa7.62□□□□□ -1.19
HDAC1-203ENST00000463172 LINC00308Q8TCZ7 52 aa7.62□□□□□ -1.19
HDAC1-203ENST00000463172 ZNF73O43830 326 aaPredicted RBP7.61□□□□□ -1.19
HDAC1-203ENST00000463172 SCGB1D4Q6XE38 83 aa7.61□□□□□ -1.19
HDAC1-203ENST00000463172 LINC00518Q8N0U6 118 aa7.61□□□□□ -1.19
HDAC1-203ENST00000463172 C3orf22Q8N5N4 141 aa7.61□□□□□ -1.19
HDAC1-203ENST00000463172 OR13C6PQ8NH95 151 aa7.61□□□□□ -1.19
HDAC1-203ENST00000463172 PPDPFQ9H3Y8 114 aa7.61□□□□□ -1.19
HDAC1-203ENST00000463172 LPAP08519 4548 aa7.61□□□□□ -1.19
HDAC1-203ENST00000463172 GAGE2AQ6NT46 116 aa7.6□□□□□ -1.19
HDAC1-203ENST00000463172 SOSTDC1Q6X4U4 206 aa7.6□□□□□ -1.19
HDAC1-203ENST00000463172 LINC00483Q53H64 154 aa7.59□□□□□ -1.19
HDAC1-203ENST00000463172 SPANXDQ9BXN6 97 aa7.59□□□□□ -1.19
HDAC1-203ENST00000463172 C5orf52A6NGY3 159 aa7.58□□□□□ -1.2
HDAC1-203ENST00000463172 S100A1P23297 94 aa7.58□□□□□ -1.2
HDAC1-203ENST00000463172 SNRPEP62304 92 aaKnown RBP7.58□□□□□ -1.2
HDAC1-203ENST00000463172 Q8NBF4 154 aa7.58□□□□□ -1.2
HDAC1-203ENST00000463172 LITAFQ99732 161 aa7.58□□□□□ -1.2
HDAC1-203ENST00000463172 SPINK1P00995 79 aa7.56□□□□□ -1.2
HDAC1-203ENST00000463172 S100A2P29034 98 aa7.56□□□□□ -1.2
HDAC1-203ENST00000463172 Q6ZVH6 145 aa7.56□□□□□ -1.2
HDAC1-203ENST00000463172 SSBP3-AS1Q7Z2R9 100 aa7.56□□□□□ -1.2
HDAC1-203ENST00000463172 RETNLBQ9BQ08 111 aa7.56□□□□□ -1.2
HDAC1-203ENST00000463172 Q9BRP9 147 aa7.56□□□□□ -1.2
HDAC1-203ENST00000463172 IGLV7-46A0A075B6I9 117 aa7.55□□□□□ -1.2
HDAC1-203ENST00000463172 IGLV9-49A0A0B4J1Y8 123 aa7.55□□□□□ -1.2
HDAC1-203ENST00000463172 EIF4EBP3O60516 100 aaPredicted RBP7.55□□□□□ -1.2
HDAC1-203ENST00000463172 ERC2-IT1O76042 136 aa7.55□□□□□ -1.2
HDAC1-203ENST00000463172 IFITM1P13164 125 aa7.55□□□□□ -1.2
HDAC1-203ENST00000463172 SLC25A34Q6PIV7 304 aa7.55□□□□□ -1.2
HDAC1-203ENST00000463172 DHRS4-AS1Q9P1J3 65 aa7.55□□□□□ -1.2
HDAC1-203ENST00000463172 MOBPQ13875 183 aa7.54□□□□□ -1.2
HDAC1-203ENST00000463172 FP248Q71RG6 208 aaPredicted RBP7.54□□□□□ -1.2
HDAC1-203ENST00000463172 TTTY13Q9BZ97 58 aa7.54□□□□□ -1.2
HDAC1-203ENST00000463172 HSBP1L1C9JCN9 74 aa7.53□□□□□ -1.2
HDAC1-203ENST00000463172 S100A6P06703 90 aa7.53□□□□□ -1.2
HDAC1-203ENST00000463172 TPRXLQ17RH7 258 aa7.53□□□□□ -1.2
HDAC1-203ENST00000463172 ATOH7Q8N100 152 aa7.53□□□□□ -1.2
HDAC1-203ENST00000463172 CDIP1Q9H305 208 aa7.53□□□□□ -1.2
HDAC1-203ENST00000463172 ANKRD39Q53RE8 183 aa7.52□□□□□ -1.21
HDAC1-203ENST00000463172 C9orf153Q5TBE3 101 aa7.52□□□□□ -1.21
HDAC1-203ENST00000463172 A0A0U1RQV1 116 aa7.51□□□□□ -1.21
HDAC1-203ENST00000463172 COX7BP24311 80 aa7.51□□□□□ -1.21
HDAC1-203ENST00000463172 RPS29P62273 56 aaKnown RBP7.51□□□□□ -1.21
HDAC1-203ENST00000463172 A6NDN8 102 aa7.49□□□□□ -1.21
HDAC1-203ENST00000463172 ELOF1P60002 83 aaKnown RBP7.49□□□□□ -1.21
HDAC1-203ENST00000463172 C6orf99Q4VX62 202 aa7.49□□□□□ -1.21
HDAC1-203ENST00000463172 HIST3H2BBQ8N257 126 aa7.49□□□□□ -1.21
HDAC1-203ENST00000463172 TRAV13-2A0A0B4J235 113 aa7.48□□□□□ -1.21
HDAC1-203ENST00000463172 TRBV7-6A0A0J9YX20 115 aa7.48□□□□□ -1.21
HDAC1-203ENST00000463172 PCP2Q8IVA1 136 aa7.48□□□□□ -1.21
HDAC1-203ENST00000463172 HIST1H2BLQ99880 126 aa7.48□□□□□ -1.21
HDAC1-203ENST00000463172 LAMTOR3Q9UHA4 124 aa7.48□□□□□ -1.21
HDAC1-203ENST00000463172 SLC25A20O43772 301 aa7.47□□□□□ -1.21
HDAC1-203ENST00000463172 MUSTN1Q8IVN3 82 aa7.47□□□□□ -1.21
HDAC1-203ENST00000463172 ST20-AS1Q8NBB2 130 aa7.47□□□□□ -1.21
HDAC1-203ENST00000463172 A0A1B0GWB2 263 aa7.46□□□□□ -1.22
HDAC1-203ENST00000463172 A4D1N5 150 aa7.46□□□□□ -1.22
HDAC1-203ENST00000463172 TAL2Q16559 108 aa7.46□□□□□ -1.22
HDAC1-203ENST00000463172 SPRR1BP22528 89 aa7.45□□□□□ -1.22
HDAC1-203ENST00000463172 NHP2Q9NX24 153 aaKnown RBP7.45□□□□□ -1.22
HDAC1-203ENST00000463172 TEX49A0A1B0GTD5 131 aa7.43□□□□□ -1.22
HDAC1-203ENST00000463172 VAMP3Q15836 100 aa7.43□□□□□ -1.22
HDAC1-203ENST00000463172 LIMD2Q9BT23 127 aa7.43□□□□□ -1.22
HDAC1-203ENST00000463172 SCGB1D1O95968 90 aa7.42□□□□□ -1.22
HDAC1-203ENST00000463172 Q8N377 158 aa7.42□□□□□ -1.22
HDAC1-203ENST00000463172 DEFB105AQ8NG35 78 aa7.41□□□□□ -1.22
HDAC1-203ENST00000463172 MUC2Q02817 5179 aa7.41□□□□□ -1.22
HDAC1-203ENST00000463172 PRO1933Q9H354 126 aa7.39□□□□□ -1.23
HDAC1-203ENST00000463172 Q1RN00 199 aa7.38□□□□□ -1.23
HDAC1-203ENST00000463172 KRTAP13-3Q3SY46 172 aa7.38□□□□□ -1.23
HDAC1-203ENST00000463172 SMIM11BQ8TCY0 68 aa7.38□□□□□ -1.23
HDAC1-203ENST00000463172 CD164Q04900 197 aa7.37□□□□□ -1.23
HDAC1-203ENST00000463172 HIST1H4GQ99525 98 aa7.36□□□□□ -1.23
HDAC1-203ENST00000463172 IGLV5-48A0A075B6I7 105 aa7.35□□□□□ -1.23
HDAC1-203ENST00000463172 F8WEM9 126 aa7.35□□□□□ -1.23
HDAC1-203ENST00000463172 H7C2G1 150 aa7.35□□□□□ -1.23
HDAC1-203ENST00000463172 HRCT1Q6UXD1 115 aa7.35□□□□□ -1.23
HDAC1-203ENST00000463172 COX8AP10176 69 aa7.34□□□□□ -1.23
HDAC1-203ENST00000463172 SEC61BP60468 96 aaKnown RBP7.34□□□□□ -1.23
HDAC1-203ENST00000463172 DLEU1O43261 78 aa7.32□□□□□ -1.24
HDAC1-203ENST00000463172 BVES-AS1Q5T3Y7 98 aa7.32□□□□□ -1.24
HDAC1-203ENST00000463172 MUC17Q685J3 4493 aa7.31□□□□□ -1.24
HDAC1-203ENST00000463172 hADV29S1A0JD25 119 aa7.31□□□□□ -1.24
HDAC1-203ENST00000463172 SNCGO76070 127 aa7.31□□□□□ -1.24
HDAC1-203ENST00000463172 LINC01547P58512 204 aaPredicted RBP7.3□□□□□ -1.24
HDAC1-203ENST00000463172 ASB16-AS1Q495Z4 193 aa7.3□□□□□ -1.24
HDAC1-203ENST00000463172 LINC00575Q6W349 94 aa7.3□□□□□ -1.24
HDAC1-203ENST00000463172 SMIM29Q86T20 159 aa7.3□□□□□ -1.24
HDAC1-203ENST00000463172 SPATA45Q537H7 98 aa7.28□□□□□ -1.24
HDAC1-203ENST00000463172 Q5XG85 94 aa7.28□□□□□ -1.24
HDAC1-203ENST00000463172 RAB37Q96AX2 223 aa7.28□□□□□ -1.24
HDAC1-203ENST00000463172 C12orf57Q99622 126 aa7.28□□□□□ -1.24
HDAC1-203ENST00000463172 VAMP8Q9BV40 100 aa7.28□□□□□ -1.24
HDAC1-203ENST00000463172 TCL1BO95988 128 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms