RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 LINC00518Q8N0U6 118 aa4.92□□□□□ -1.62
GARNL3-212ENST00000463005 HIST1H4GQ99525 98 aa4.92□□□□□ -1.62
GARNL3-212ENST00000463005 VPREB1P12018 145 aa4.91□□□□□ -1.62
GARNL3-212ENST00000463005 NPC2P61916 151 aa4.91□□□□□ -1.62
GARNL3-212ENST00000463005 Q75L30 129 aa4.91□□□□□ -1.62
GARNL3-212ENST00000463005 MIR7-3HGQ8N6C7 128 aa4.91□□□□□ -1.62
GARNL3-212ENST00000463005 TLX1NBP0CAT3 122 aa4.9□□□□□ -1.63
GARNL3-212ENST00000463005 Q6ZVH6 145 aa4.9□□□□□ -1.63
GARNL3-212ENST00000463005 DAND5Q8N907 189 aa4.9□□□□□ -1.63
GARNL3-212ENST00000463005 TP73-AS1Q9UF72 201 aa4.9□□□□□ -1.63
GARNL3-212ENST00000463005 IGLV5-37A0A075B6J1 123 aa4.89□□□□□ -1.63
GARNL3-212ENST00000463005 A0A096LNI7 61 aa4.89□□□□□ -1.63
GARNL3-212ENST00000463005 IFITM1P13164 125 aa4.89□□□□□ -1.63
GARNL3-212ENST00000463005 NKAPP1Q8N9T2 125 aa4.89□□□□□ -1.63
GARNL3-212ENST00000463005 SPANXDQ9BXN6 97 aa4.89□□□□□ -1.63
GARNL3-212ENST00000463005 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
GARNL3-212ENST00000463005 XAGE1AQ9HD64 81 aa4.89□□□□□ -1.63
GARNL3-212ENST00000463005 SPANXB1Q9NS25 103 aaPredicted RBP4.89□□□□□ -1.63
GARNL3-212ENST00000463005 SPANXCQ9NY87 97 aa4.89□□□□□ -1.63
GARNL3-212ENST00000463005 HIGD1BQ9P298 99 aa4.89□□□□□ -1.63
GARNL3-212ENST00000463005 PSORS1C2Q9UIG4 136 aa4.89□□□□□ -1.63
GARNL3-212ENST00000463005 RPL24P83731 157 aaKnown RBP4.88□□□□□ -1.63
GARNL3-212ENST00000463005 HSD52Q0P140 79 aa4.88□□□□□ -1.63
GARNL3-212ENST00000463005 SND1-IT1Q9HBX3 110 aa4.88□□□□□ -1.63
GARNL3-212ENST00000463005 TAL2Q16559 108 aa4.87□□□□□ -1.63
GARNL3-212ENST00000463005 FAM19A5Q7Z5A7 132 aaPredicted RBP4.87□□□□□ -1.63
GARNL3-212ENST00000463005 LINC00308Q8TCZ7 52 aa4.87□□□□□ -1.63
GARNL3-212ENST00000463005 LPAP08519 4548 aa4.87□□□□□ -1.63
GARNL3-212ENST00000463005 PCP4L1A6NKN8 68 aa4.86□□□□□ -1.63
GARNL3-212ENST00000463005 M0R143 59 aa4.86□□□□□ -1.63
GARNL3-212ENST00000463005 ADAMTSL4-AS1Q5T5F5 129 aa4.86□□□□□ -1.63
GARNL3-212ENST00000463005 C2orf91Q6ZV80 131 aa4.86□□□□□ -1.63
GARNL3-212ENST00000463005 MUSTN1Q8IVN3 82 aa4.86□□□□□ -1.63
GARNL3-212ENST00000463005 NCR3O14931 201 aa4.85□□□□□ -1.63
GARNL3-212ENST00000463005 DDTP30046 118 aa4.85□□□□□ -1.63
GARNL3-212ENST00000463005 UBE2BP63146 152 aa4.85□□□□□ -1.63
GARNL3-212ENST00000463005 S100A7L2Q5SY68 101 aa4.85□□□□□ -1.63
GARNL3-212ENST00000463005 CEND1Q8N111 149 aa4.85□□□□□ -1.63
GARNL3-212ENST00000463005 OR13C6PQ8NH95 151 aa4.85□□□□□ -1.63
GARNL3-212ENST00000463005 RAB37Q96AX2 223 aa4.85□□□□□ -1.63
GARNL3-212ENST00000463005 LITAFQ99732 161 aa4.85□□□□□ -1.63
GARNL3-212ENST00000463005 M0QXV9 152 aa4.84□□□□□ -1.63
GARNL3-212ENST00000463005 CTAG1AP78358 180 aa4.84□□□□□ -1.63
GARNL3-212ENST00000463005 BATFQ16520 125 aa4.84□□□□□ -1.63
GARNL3-212ENST00000463005 LBHQ53QV2 105 aaPredicted RBP4.84□□□□□ -1.63
GARNL3-212ENST00000463005 C9orf129Q5T035 196 aaKnown RBP4.84□□□□□ -1.63
GARNL3-212ENST00000463005 A4D1N5 150 aa4.83□□□□□ -1.64
GARNL3-212ENST00000463005 A6NDN8 102 aa4.83□□□□□ -1.64
GARNL3-212ENST00000463005 NDUFC2O95298 119 aa4.83□□□□□ -1.64
GARNL3-212ENST00000463005 HINT1P49773 126 aaPredicted RBP4.83□□□□□ -1.64
GARNL3-212ENST00000463005 DIRC1Q969H9 104 aa4.83□□□□□ -1.64
GARNL3-212ENST00000463005 CBY1Q9Y3M2 126 aa4.83□□□□□ -1.64
GARNL3-212ENST00000463005 IGLV1-50A0A075B6I6 118 aa4.82□□□□□ -1.64
GARNL3-212ENST00000463005 TRAV13-2A0A0B4J235 113 aa4.82□□□□□ -1.64
GARNL3-212ENST00000463005 FAM168BA1KXE4 195 aa4.82□□□□□ -1.64
GARNL3-212ENST00000463005 M0R378 163 aa4.82□□□□□ -1.64
GARNL3-212ENST00000463005 Q1RN00 199 aa4.82□□□□□ -1.64
GARNL3-212ENST00000463005 C1orf137Q5JT78 98 aa4.82□□□□□ -1.64
GARNL3-212ENST00000463005 SOSTDC1Q6X4U4 206 aa4.82□□□□□ -1.64
GARNL3-212ENST00000463005 MRPL55Q7Z7F7 128 aaKnown RBP4.82□□□□□ -1.64
GARNL3-212ENST00000463005 PPDPFQ9H3Y8 114 aa4.82□□□□□ -1.64
GARNL3-212ENST00000463005 NHP2Q9NX24 153 aaKnown RBP4.82□□□□□ -1.64
GARNL3-212ENST00000463005 LOC107984156A0A0G2JMH3 177 aa4.81□□□□□ -1.64
GARNL3-212ENST00000463005 TRBV10-2A0A0K0K1G8 114 aa4.81□□□□□ -1.64
GARNL3-212ENST00000463005 A0A1W2PNN7 141 aa4.81□□□□□ -1.64
GARNL3-212ENST00000463005 PRR4Q16378 134 aa4.81□□□□□ -1.64
GARNL3-212ENST00000463005 ARL17AQ8IVW1 177 aa4.81□□□□□ -1.64
GARNL3-212ENST00000463005 C22orf24Q9Y442 160 aa4.81□□□□□ -1.64
GARNL3-212ENST00000463005 H7C2G1 150 aa4.8□□□□□ -1.64
GARNL3-212ENST00000463005 IGLV7-43P04211 117 aa4.8□□□□□ -1.64
GARNL3-212ENST00000463005 RPL13AP40429 203 aaKnown RBP4.8□□□□□ -1.64
GARNL3-212ENST00000463005 FXYD2P54710 66 aa4.8□□□□□ -1.64
GARNL3-212ENST00000463005 GAGE2AQ6NT46 116 aa4.8□□□□□ -1.64
GARNL3-212ENST00000463005 PHF5AQ7RTV0 110 aaKnown RBP4.8□□□□□ -1.64
GARNL3-212ENST00000463005 TMEM126AQ9H061 195 aa4.8□□□□□ -1.64
GARNL3-212ENST00000463005 IGKV2-28A0A075B6P5 120 aa4.79□□□□□ -1.64
GARNL3-212ENST00000463005 A0A0B4J2C4 111 aa4.79□□□□□ -1.64
GARNL3-212ENST00000463005 RPL37AP8A6NKH3 93 aa4.79□□□□□ -1.64
GARNL3-212ENST00000463005 H0Y9J4 135 aa4.79□□□□□ -1.64
GARNL3-212ENST00000463005 IGKV2D-28P01615 120 aa4.79□□□□□ -1.64
GARNL3-212ENST00000463005 BVES-AS1Q5T3Y7 98 aa4.79□□□□□ -1.64
GARNL3-212ENST00000463005 TRAV23DV6A0A075B6W5 121 aa4.78□□□□□ -1.64
GARNL3-212ENST00000463005 TRBV10-3A0A0K0K1G6 114 aa4.78□□□□□ -1.64
GARNL3-212ENST00000463005 LINC00167Q96N53 147 aa4.78□□□□□ -1.64
GARNL3-212ENST00000463005 PRO1854Q9UHT4 67 aa4.78□□□□□ -1.64
GARNL3-212ENST00000463005 ETDCA0A1B0GVM5 59 aa4.77□□□□□ -1.65
GARNL3-212ENST00000463005 CFC1BP0CG36 223 aa4.77□□□□□ -1.65
GARNL3-212ENST00000463005 CFC1P0CG37 223 aa4.77□□□□□ -1.65
GARNL3-212ENST00000463005 PSMB2P49721 201 aa4.77□□□□□ -1.65
GARNL3-212ENST00000463005 LINC00337Q8N6G1 96 aa4.77□□□□□ -1.65
GARNL3-212ENST00000463005 Q8N9P0 234 aaPredicted RBP4.77□□□□□ -1.65
GARNL3-212ENST00000463005 K7ERJ3 54 aa4.76□□□□□ -1.65
GARNL3-212ENST00000463005 VAMP3Q15836 100 aa4.76□□□□□ -1.65
GARNL3-212ENST00000463005 Q8NDZ9 215 aa4.76□□□□□ -1.65
GARNL3-212ENST00000463005 MUC2Q02817 5179 aa4.76□□□□□ -1.65
GARNL3-212ENST00000463005 SNCGO76070 127 aa4.75□□□□□ -1.65
GARNL3-212ENST00000463005 IGLV6-57P01721 117 aa4.75□□□□□ -1.65
GARNL3-212ENST00000463005 COX6CP09669 75 aa4.75□□□□□ -1.65
GARNL3-212ENST00000463005 KRTAP1-4P0C5Y4 121 aa4.75□□□□□ -1.65
GARNL3-212ENST00000463005 UBE2AP49459 152 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms