RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 LINC00588Q9Y4M8 146 aa10.33□□□□□ -0.76
SMC4-204ENST00000462787 FAM229AH3BQW9 127 aa10.33□□□□□ -0.76
SMC4-204ENST00000462787 LINC00313P59037 77 aa10.33□□□□□ -0.76
SMC4-204ENST00000462787 OXTP01178 125 aa10.32□□□□□ -0.76
SMC4-204ENST00000462787 JMJD1CQ15652 2540 aa10.3□□□□□ -0.76
SMC4-204ENST00000462787 PRRC2CQ9Y520 2896 aaKnown RBP10.3□□□□□ -0.76
SMC4-204ENST00000462787 CEP350Q5VT06 3117 aa10.3□□□□□ -0.76
SMC4-204ENST00000462787 MIR22HGQ0VDD5 57 aa10.29□□□□□ -0.76
SMC4-204ENST00000462787 FAM229BQ4G0N7 80 aa10.29□□□□□ -0.76
SMC4-204ENST00000462787 LRRK2Q5S007 2527 aa10.28□□□□□ -0.76
SMC4-204ENST00000462787 A0A1B0GVX0 72 aa10.27□□□□□ -0.76
SMC4-204ENST00000462787 LY6G6CO95867 125 aa10.27□□□□□ -0.77
SMC4-204ENST00000462787 SPRR4Q96PI1 79 aa10.26□□□□□ -0.77
SMC4-204ENST00000462787 DOPEY1Q5JWR5 2465 aa10.26□□□□□ -0.77
SMC4-204ENST00000462787 DSCR10P59022 87 aa10.26□□□□□ -0.77
SMC4-204ENST00000462787 MTORP42345 2549 aa10.26□□□□□ -0.77
SMC4-204ENST00000462787 IGLV8-61A0A075B6I0 122 aa10.25□□□□□ -0.77
SMC4-204ENST00000462787 A0A0G2JQZ4 141 aa10.25□□□□□ -0.77
SMC4-204ENST00000462787 A0A1W2PNN7 141 aa10.25□□□□□ -0.77
SMC4-204ENST00000462787 CHTF8P0CG12 524 aa10.24□□□□□ -0.77
SMC4-204ENST00000462787 Q75L30 129 aa10.23□□□□□ -0.77
SMC4-204ENST00000462787 IGLV5-37A0A075B6J1 123 aa10.23□□□□□ -0.77
SMC4-204ENST00000462787 MDFIQ99750 246 aa10.23□□□□□ -0.77
SMC4-204ENST00000462787 ANKRD17O75179 2603 aaKnown RBP10.22□□□□□ -0.77
SMC4-204ENST00000462787 C1orf134Q5TEV5 83 aa10.22□□□□□ -0.77
SMC4-204ENST00000462787 ZFYVE26Q68DK2 2539 aa10.22□□□□□ -0.77
SMC4-204ENST00000462787 RBM12B-AS1Q9P1G2 102 aa10.22□□□□□ -0.77
SMC4-204ENST00000462787 SPACA4Q8TDM5 124 aa10.2□□□□□ -0.78
SMC4-204ENST00000462787 POLQO75417 2590 aa10.2□□□□□ -0.78
SMC4-204ENST00000462787 A0A0C4DFX4 3053 aa10.19□□□□□ -0.78
SMC4-204ENST00000462787 IGLV7-46A0A075B6I9 117 aa10.18□□□□□ -0.78
SMC4-204ENST00000462787 Q8N9P0 234 aaPredicted RBP10.17□□□□□ -0.78
SMC4-204ENST00000462787 NBDYA0A0U1RRE5 68 aa10.14□□□□□ -0.79
SMC4-204ENST00000462787 Q8NDZ9 215 aa10.13□□□□□ -0.79
SMC4-204ENST00000462787 SPINT4Q6UDR6 99 aa10.12□□□□□ -0.79
SMC4-204ENST00000462787 SPTBN4Q9H254 2564 aa10.11□□□□□ -0.79
SMC4-204ENST00000462787 LINC01558Q9Y6Z2 57 aa10.11□□□□□ -0.79
SMC4-204ENST00000462787 RTL8CO15255 209 aa10.11□□□□□ -0.79
SMC4-204ENST00000462787 Q5VV11 94 aa10.1□□□□□ -0.79
SMC4-204ENST00000462787 FASNP49327 2511 aaKnown RBP10.1□□□□□ -0.79
SMC4-204ENST00000462787 SSBP3-AS1Q7Z2R9 100 aa10.07□□□□□ -0.8
SMC4-204ENST00000462787 Q96NJ1 140 aa10.06□□□□□ -0.8
SMC4-204ENST00000462787 PCNTO95613 3336 aa10.06□□□□□ -0.8
SMC4-204ENST00000462787 PRR26Q8N8Z3 221 aa10.05□□□□□ -0.8
SMC4-204ENST00000462787 ACANP16112 2415 aa10.04□□□□□ -0.8
SMC4-204ENST00000462787 CHD7Q9P2D1 2997 aa10.04□□□□□ -0.8
SMC4-204ENST00000462787 F8P00451 2351 aa10.04□□□□□ -0.8
SMC4-204ENST00000462787 CNBPP62633 177 aaKnown RBP10.04□□□□□ -0.8
SMC4-204ENST00000462787 ZNF861PO60384 105 aa10.04□□□□□ -0.8
SMC4-204ENST00000462787 C9orf163Q8N9P6 203 aa10.04□□□□□ -0.8
SMC4-204ENST00000462787 KRTAP10-3P60369 221 aa10.01□□□□□ -0.81
SMC4-204ENST00000462787 CASC10Q5T4H9 136 aa10.01□□□□□ -0.81
SMC4-204ENST00000462787 SPRR1AP35321 89 aa10□□□□□ -0.81
SMC4-204ENST00000462787 TYMSOSQ8TAI1 123 aa9.99□□□□□ -0.81
SMC4-204ENST00000462787 LINC01554Q52M75 96 aa9.99□□□□□ -0.81
SMC4-204ENST00000462787 CR1P17927 2039 aa9.98□□□□□ -0.81
SMC4-204ENST00000462787 MMP24-AS1A0A0U1RRL7 71 aa9.96□□□□□ -0.81
SMC4-204ENST00000462787 KRTAP10-11P60412 298 aa9.96□□□□□ -0.82
SMC4-204ENST00000462787 KRTAP24-1Q3LI83 254 aa9.94□□□□□ -0.82
SMC4-204ENST00000462787 C5orf42Q9H799 3197 aa9.92□□□□□ -0.82
SMC4-204ENST00000462787 HRES1P13985 223 aa9.9□□□□□ -0.82
SMC4-204ENST00000462787 CRIPTQ9P021 101 aa9.9□□□□□ -0.82
SMC4-204ENST00000462787 CHD9Q3L8U1 2897 aa9.89□□□□□ -0.83
SMC4-204ENST00000462787 ANAPC11Q9NYG5 84 aa9.88□□□□□ -0.83
SMC4-204ENST00000462787 LINC00472Q9H8W2 130 aa9.87□□□□□ -0.83
SMC4-204ENST00000462787 PRAC1Q96KF2 57 aa9.87□□□□□ -0.83
SMC4-204ENST00000462787 PSORS1C2Q9UIG4 136 aa9.87□□□□□ -0.83
SMC4-204ENST00000462787 KRTAP1-3Q8IUG1 177 aa9.87□□□□□ -0.83
SMC4-204ENST00000462787 SPINK7P58062 85 aa9.86□□□□□ -0.83
SMC4-204ENST00000462787 ZCCHC13Q8WW36 166 aaKnown RBP9.86□□□□□ -0.83
SMC4-204ENST00000462787 TNP2Q05952 138 aa9.85□□□□□ -0.83
SMC4-204ENST00000462787 UTRNP46939 3433 aa9.85□□□□□ -0.83
SMC4-204ENST00000462787 SPRR1BP22528 89 aa9.84□□□□□ -0.83
SMC4-204ENST00000462787 EPG5Q9HCE0 2579 aa9.84□□□□□ -0.83
SMC4-204ENST00000462787 IGLV7-43P04211 117 aa9.84□□□□□ -0.83
SMC4-204ENST00000462787 PLA2G1BP04054 148 aaKnown RBP9.83□□□□□ -0.84
SMC4-204ENST00000462787 H3BS24 57 aa9.83□□□□□ -0.84
SMC4-204ENST00000462787 A0A087WTM6 91 aa9.83□□□□□ -0.84
SMC4-204ENST00000462787 FLNBO75369 2602 aaKnown RBP9.82□□□□□ -0.84
SMC4-204ENST00000462787 K7EIL1 84 aa9.79□□□□□ -0.84
SMC4-204ENST00000462787 KRTAP1-1Q07627 177 aa9.79□□□□□ -0.84
SMC4-204ENST00000462787 HTTP42858 3142 aa9.78□□□□□ -0.84
SMC4-204ENST00000462787 APLNQ9ULZ1 77 aa9.78□□□□□ -0.84
SMC4-204ENST00000462787 Q8N1X5 172 aa9.77□□□□□ -0.84
SMC4-204ENST00000462787 KRTAP26-1Q6PEX3 210 aa9.76□□□□□ -0.85
SMC4-204ENST00000462787 ASB16-AS1Q495Z4 193 aa9.74□□□□□ -0.85
SMC4-204ENST00000462787 LINC00304Q8N9R0 145 aa9.74□□□□□ -0.85
SMC4-204ENST00000462787 LCE6AA0A183 80 aa9.73□□□□□ -0.85
SMC4-204ENST00000462787 KRTAP29-1A8MX34 341 aaPredicted RBP9.73□□□□□ -0.85
SMC4-204ENST00000462787 CFAP54Q96N23 3096 aa9.73□□□□□ -0.85
SMC4-204ENST00000462787 A0A1B0GU33 70 aa9.72□□□□□ -0.85
SMC4-204ENST00000462787 CSAG1Q6PB30 78 aa9.71□□□□□ -0.86
SMC4-204ENST00000462787 TRANK1O15050 2925 aa9.69□□□□□ -0.86
SMC4-204ENST00000462787 KRTAP4-16G5E9R7 235 aaPredicted RBP9.69□□□□□ -0.86
SMC4-204ENST00000462787 Q6ZR54 194 aa9.67□□□□□ -0.86
SMC4-204ENST00000462787 Q5W150 140 aa9.66□□□□□ -0.86
SMC4-204ENST00000462787 A6NN06 94 aa9.64□□□□□ -0.87
SMC4-204ENST00000462787 C9orf92A6NGG3 77 aa9.63□□□□□ -0.87
SMC4-204ENST00000462787 DMAC1Q96GE9 116 aa9.61□□□□□ -0.87
SMC4-204ENST00000462787 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms