RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 ANKRD39Q53RE8 183 aa13.95□□□□□ -0.18
SMKR1-201ENST00000462322 PPDPFQ9H3Y8 114 aa13.95□□□□□ -0.18
SMKR1-201ENST00000462322 LPAP08519 4548 aa13.94□□□□□ -0.18
SMKR1-201ENST00000462322 AKR1D1P51857 326 aa13.94□□□□□ -0.18
SMKR1-201ENST00000462322 Q6ZRX8 168 aa13.94□□□□□ -0.18
SMKR1-201ENST00000462322 SCGB1D4Q6XE38 83 aa13.93□□□□□ -0.18
SMKR1-201ENST00000462322 ZNF73O43830 326 aaPredicted RBP13.92□□□□□ -0.18
SMKR1-201ENST00000462322 S100A2P29034 98 aa13.92□□□□□ -0.18
SMKR1-201ENST00000462322 HIST3H2BBQ8N257 126 aa13.92□□□□□ -0.18
SMKR1-201ENST00000462322 OR13C6PQ8NH95 151 aa13.92□□□□□ -0.18
SMKR1-201ENST00000462322 Q9BRP9 147 aa13.92□□□□□ -0.18
SMKR1-201ENST00000462322 CBY1Q9Y3M2 126 aa13.92□□□□□ -0.18
SMKR1-201ENST00000462322 ERC2-IT1O76042 136 aa13.91□□□□□ -0.18
SMKR1-201ENST00000462322 RNF213Q63HN8 5207 aa13.91□□□□□ -0.18
SMKR1-201ENST00000462322 JOSD1Q15040 202 aaPredicted RBP13.9□□□□□ -0.18
SMKR1-201ENST00000462322 GAGE2AQ6NT46 116 aa13.9□□□□□ -0.18
SMKR1-201ENST00000462322 HIST1H2BLQ99880 126 aa13.89□□□□□ -0.19
SMKR1-201ENST00000462322 LINC00483Q53H64 154 aa13.88□□□□□ -0.19
SMKR1-201ENST00000462322 S100A6P06703 90 aa13.87□□□□□ -0.19
SMKR1-201ENST00000462322 HINT1P49773 126 aaPredicted RBP13.87□□□□□ -0.19
SMKR1-201ENST00000462322 SPANXDQ9BXN6 97 aa13.87□□□□□ -0.19
SMKR1-201ENST00000462322 PCP2Q8IVA1 136 aa13.86□□□□□ -0.19
SMKR1-201ENST00000462322 LINC00518Q8N0U6 118 aa13.86□□□□□ -0.19
SMKR1-201ENST00000462322 SNRPEP62304 92 aaKnown RBP13.85□□□□□ -0.19
SMKR1-201ENST00000462322 CTAG1AP78358 180 aa13.85□□□□□ -0.19
SMKR1-201ENST00000462322 RETNLBQ9BQ08 111 aa13.85□□□□□ -0.19
SMKR1-201ENST00000462322 SPAG11AQ6PDA7 123 aa13.84□□□□□ -0.19
SMKR1-201ENST00000462322 COPS9Q8WXC6 57 aa13.84□□□□□ -0.19
SMKR1-201ENST00000462322 C4orf48Q5BLP8 95 aa13.83□□□□□ -0.2
SMKR1-201ENST00000462322 Q8NBF4 154 aa13.83□□□□□ -0.2
SMKR1-201ENST00000462322 IFITM1P13164 125 aa13.81□□□□□ -0.2
SMKR1-201ENST00000462322 Q6ZVH6 145 aa13.8□□□□□ -0.2
SMKR1-201ENST00000462322 IGLV9-49A0A0B4J1Y8 123 aa13.79□□□□□ -0.2
SMKR1-201ENST00000462322 HSBP1L1C9JCN9 74 aa13.78□□□□□ -0.2
SMKR1-201ENST00000462322 MOBPQ13875 183 aa13.77□□□□□ -0.21
SMKR1-201ENST00000462322 MUSTN1Q8IVN3 82 aa13.77□□□□□ -0.21
SMKR1-201ENST00000462322 ST20-AS1Q8NBB2 130 aa13.76□□□□□ -0.21
SMKR1-201ENST00000462322 C6orf99Q4VX62 202 aa13.75□□□□□ -0.21
SMKR1-201ENST00000462322 COX7BP24311 80 aa13.74□□□□□ -0.21
SMKR1-201ENST00000462322 DHRS4-AS1Q9P1J3 65 aa13.74□□□□□ -0.21
SMKR1-201ENST00000462322 C5orf52A6NGY3 159 aa13.73□□□□□ -0.21
SMKR1-201ENST00000462322 SSBP3-AS1Q7Z2R9 100 aa13.73□□□□□ -0.21
SMKR1-201ENST00000462322 A6NDN8 102 aa13.72□□□□□ -0.21
SMKR1-201ENST00000462322 IGLV7-46A0A075B6I9 117 aa13.71□□□□□ -0.21
SMKR1-201ENST00000462322 SPINK1P00995 79 aa13.71□□□□□ -0.21
SMKR1-201ENST00000462322 ELOF1P60002 83 aaKnown RBP13.71□□□□□ -0.21
SMKR1-201ENST00000462322 SCGB1D1O95968 90 aa13.7□□□□□ -0.22
SMKR1-201ENST00000462322 C9orf153Q5TBE3 101 aa13.69□□□□□ -0.22
SMKR1-201ENST00000462322 TRBV7-6A0A0J9YX20 115 aa13.66□□□□□ -0.22
SMKR1-201ENST00000462322 TRAV13-2A0A0B4J235 113 aa13.65□□□□□ -0.22
SMKR1-201ENST00000462322 SPRR1BP22528 89 aa13.64□□□□□ -0.23
SMKR1-201ENST00000462322 TPRXLQ17RH7 258 aa13.63□□□□□ -0.23
SMKR1-201ENST00000462322 SLC25A34Q6PIV7 304 aa13.63□□□□□ -0.23
SMKR1-201ENST00000462322 A0A1B0GWB2 263 aa13.62□□□□□ -0.23
SMKR1-201ENST00000462322 FP248Q71RG6 208 aaPredicted RBP13.62□□□□□ -0.23
SMKR1-201ENST00000462322 CDIP1Q9H305 208 aa13.61□□□□□ -0.23
SMKR1-201ENST00000462322 TAL2Q16559 108 aa13.6□□□□□ -0.23
SMKR1-201ENST00000462322 RPS29P62273 56 aaKnown RBP13.59□□□□□ -0.23
SMKR1-201ENST00000462322 DEFB105AQ8NG35 78 aa13.59□□□□□ -0.23
SMKR1-201ENST00000462322 LAMTOR3Q9UHA4 124 aa13.59□□□□□ -0.23
SMKR1-201ENST00000462322 SMIM11BQ8TCY0 68 aa13.58□□□□□ -0.24
SMKR1-201ENST00000462322 A4D1N5 150 aa13.56□□□□□ -0.24
SMKR1-201ENST00000462322 COX8AP10176 69 aa13.55□□□□□ -0.24
SMKR1-201ENST00000462322 Q8N377 158 aa13.55□□□□□ -0.24
SMKR1-201ENST00000462322 TEX49A0A1B0GTD5 131 aa13.54□□□□□ -0.24
SMKR1-201ENST00000462322 SLC25A20O43772 301 aa13.53□□□□□ -0.24
SMKR1-201ENST00000462322 Q1RN00 199 aa13.53□□□□□ -0.24
SMKR1-201ENST00000462322 HIST1H4GQ99525 98 aa13.52□□□□□ -0.25
SMKR1-201ENST00000462322 NHP2Q9NX24 153 aaKnown RBP13.51□□□□□ -0.25
SMKR1-201ENST00000462322 VAMP3Q15836 100 aa13.5□□□□□ -0.25
SMKR1-201ENST00000462322 DLEU1O43261 78 aa13.49□□□□□ -0.25
SMKR1-201ENST00000462322 HRCT1Q6UXD1 115 aa13.48□□□□□ -0.25
SMKR1-201ENST00000462322 MUC2Q02817 5179 aa13.47□□□□□ -0.25
SMKR1-201ENST00000462322 IGLV5-48A0A075B6I7 105 aa13.47□□□□□ -0.25
SMKR1-201ENST00000462322 LINC01547P58512 204 aaPredicted RBP13.47□□□□□ -0.25
SMKR1-201ENST00000462322 C14orf144Q96I85 54 aa13.47□□□□□ -0.25
SMKR1-201ENST00000462322 C12orf57Q99622 126 aa13.47□□□□□ -0.25
SMKR1-201ENST00000462322 PAM16Q9Y3D7 125 aa13.47□□□□□ -0.25
SMKR1-201ENST00000462322 KRTAP13-3Q3SY46 172 aa13.46□□□□□ -0.25
SMKR1-201ENST00000462322 SPATA45Q537H7 98 aa13.46□□□□□ -0.25
SMKR1-201ENST00000462322 SMIM29Q86T20 159 aa13.45□□□□□ -0.26
SMKR1-201ENST00000462322 VAMP8Q9BV40 100 aa13.44□□□□□ -0.26
SMKR1-201ENST00000462322 PRO1933Q9H354 126 aa13.44□□□□□ -0.26
SMKR1-201ENST00000462322 LINC00575Q6W349 94 aa13.42□□□□□ -0.26
SMKR1-201ENST00000462322 LIMD2Q9BT23 127 aa13.42□□□□□ -0.26
SMKR1-201ENST00000462322 HIGD1BQ9P298 99 aa13.39□□□□□ -0.27
SMKR1-201ENST00000462322 hADV29S1A0JD25 119 aa13.38□□□□□ -0.27
SMKR1-201ENST00000462322 CD164Q04900 197 aa13.38□□□□□ -0.27
SMKR1-201ENST00000462322 H7C2G1 150 aa13.37□□□□□ -0.27
SMKR1-201ENST00000462322 MUC17Q685J3 4493 aa13.36□□□□□ -0.27
SMKR1-201ENST00000462322 Q6ZQY7 126 aa13.35□□□□□ -0.27
SMKR1-201ENST00000462322 A0A0U1RQV1 116 aa13.34□□□□□ -0.27
SMKR1-201ENST00000462322 BVES-AS1Q5T3Y7 98 aa13.34□□□□□ -0.27
SMKR1-201ENST00000462322 RAB37Q96AX2 223 aa13.34□□□□□ -0.27
SMKR1-201ENST00000462322 CFC1BP0CG36 223 aa13.33□□□□□ -0.28
SMKR1-201ENST00000462322 CFC1P0CG37 223 aa13.33□□□□□ -0.28
SMKR1-201ENST00000462322 C2orf91Q6ZV80 131 aa13.33□□□□□ -0.28
SMKR1-201ENST00000462322 A0A0G2JQZ4 141 aa13.32□□□□□ -0.28
SMKR1-201ENST00000462322 F8WEM9 126 aa13.32□□□□□ -0.28
SMKR1-201ENST00000462322 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms