RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 TRAV23DV6A0A075B6W5 121 aa6.67□□□□□ -1.34
RTF1-202ENST00000462276 TRBV7-6A0A0J9YX20 115 aa6.67□□□□□ -1.34
RTF1-202ENST00000462276 RPL28P46779 137 aaKnown RBP6.67□□□□□ -1.34
RTF1-202ENST00000462276 XGP55808 180 aa6.67□□□□□ -1.34
RTF1-202ENST00000462276 VAMP3Q15836 100 aa6.67□□□□□ -1.34
RTF1-202ENST00000462276 RPL37AP8A6NKH3 93 aa6.66□□□□□ -1.34
RTF1-202ENST00000462276 ZNF73O43830 326 aaPredicted RBP6.66□□□□□ -1.34
RTF1-202ENST00000462276 SPRR1AP35321 89 aa6.66□□□□□ -1.34
RTF1-202ENST00000462276 K7ERJ3 54 aa6.65□□□□□ -1.34
RTF1-202ENST00000462276 COX6CP09669 75 aa6.65□□□□□ -1.34
RTF1-202ENST00000462276 Q1RN00 199 aa6.65□□□□□ -1.34
RTF1-202ENST00000462276 REG3GQ6UW15 175 aa6.65□□□□□ -1.34
RTF1-202ENST00000462276 SMIM11BQ8TCY0 68 aa6.65□□□□□ -1.34
RTF1-202ENST00000462276 DIRC1Q969H9 104 aa6.65□□□□□ -1.34
RTF1-202ENST00000462276 H0YGX0 51 aa6.64□□□□□ -1.35
RTF1-202ENST00000462276 H7C2G1 150 aa6.64□□□□□ -1.35
RTF1-202ENST00000462276 H0Y9J4 135 aa6.63□□□□□ -1.35
RTF1-202ENST00000462276 BCE1O60756 84 aa6.63□□□□□ -1.35
RTF1-202ENST00000462276 SNCGO76070 127 aa6.63□□□□□ -1.35
RTF1-202ENST00000462276 C6orf99Q4VX62 202 aa6.63□□□□□ -1.35
RTF1-202ENST00000462276 LYRM7Q5U5X0 104 aa6.63□□□□□ -1.35
RTF1-202ENST00000462276 ETDCA0A1B0GVM5 59 aa6.62□□□□□ -1.35
RTF1-202ENST00000462276 KRTAP4-16G5E9R7 235 aaPredicted RBP6.62□□□□□ -1.35
RTF1-202ENST00000462276 TSPAN13O95857 204 aa6.62□□□□□ -1.35
RTF1-202ENST00000462276 INAFM2P0DMQ5 153 aa6.62□□□□□ -1.35
RTF1-202ENST00000462276 PSMB2P49721 201 aa6.62□□□□□ -1.35
RTF1-202ENST00000462276 PSORS1C2Q9UIG4 136 aa6.62□□□□□ -1.35
RTF1-202ENST00000462276 C9orf118A6NHY6 69 aa6.61□□□□□ -1.35
RTF1-202ENST00000462276 HSPG2P98160 4391 aa6.6□□□□□ -1.35
RTF1-202ENST00000462276 J3QL48 77 aa6.6□□□□□ -1.35
RTF1-202ENST00000462276 TAX1BP3O14907 124 aa6.6□□□□□ -1.35
RTF1-202ENST00000462276 SCGB1C2P0DMR2 95 aa6.6□□□□□ -1.35
RTF1-202ENST00000462276 COX7BP24311 80 aa6.6□□□□□ -1.35
RTF1-202ENST00000462276 ELOF1P60002 83 aaKnown RBP6.6□□□□□ -1.35
RTF1-202ENST00000462276 KRTAP11-1Q8IUC1 163 aa6.6□□□□□ -1.35
RTF1-202ENST00000462276 APOBP04114 4563 aaKnown RBP6.59□□□□□ -1.35
RTF1-202ENST00000462276 A0A1B0GX51 115 aa6.59□□□□□ -1.35
RTF1-202ENST00000462276 B5MCH6 92 aa6.59□□□□□ -1.35
RTF1-202ENST00000462276 FAM229AH3BQW9 127 aa6.59□□□□□ -1.35
RTF1-202ENST00000462276 TRIAP1O43715 76 aa6.59□□□□□ -1.35
RTF1-202ENST00000462276 SLC25A20O43772 301 aa6.59□□□□□ -1.35
RTF1-202ENST00000462276 HAMPP81172 84 aa6.59□□□□□ -1.35
RTF1-202ENST00000462276 C1orf137Q5JT78 98 aa6.59□□□□□ -1.35
RTF1-202ENST00000462276 Q6ZRX8 168 aa6.59□□□□□ -1.35
RTF1-202ENST00000462276 DHRS4-AS1Q9P1J3 65 aa6.59□□□□□ -1.35
RTF1-202ENST00000462276 UBE2AP49459 152 aa6.58□□□□□ -1.36
RTF1-202ENST00000462276 FAM19A1Q7Z5A9 133 aa6.58□□□□□ -1.36
RTF1-202ENST00000462276 LINC00528Q8N1L1 170 aa6.58□□□□□ -1.36
RTF1-202ENST00000462276 TRBV20-1A0A075B6N2 111 aa6.57□□□□□ -1.36
RTF1-202ENST00000462276 H3BUT2 72 aa6.57□□□□□ -1.36
RTF1-202ENST00000462276 ZNF861PO60384 105 aa6.57□□□□□ -1.36
RTF1-202ENST00000462276 GHRHP01286 108 aa6.57□□□□□ -1.36
RTF1-202ENST00000462276 PLA2G1BP04054 148 aaKnown RBP6.57□□□□□ -1.36
RTF1-202ENST00000462276 IGLV7-43P04211 117 aa6.57□□□□□ -1.36
RTF1-202ENST00000462276 FABP2P12104 132 aa6.57□□□□□ -1.36
RTF1-202ENST00000462276 RPL37AP61513 92 aaKnown RBP6.57□□□□□ -1.36
RTF1-202ENST00000462276 LINC00575Q6W349 94 aa6.57□□□□□ -1.36
RTF1-202ENST00000462276 A0A1W2PPM0 123 aa6.56□□□□□ -1.36
RTF1-202ENST00000462276 KRTAP13-1Q8IUC0 172 aa6.56□□□□□ -1.36
RTF1-202ENST00000462276 SMR3BP02814 79 aaPredicted RBP6.55□□□□□ -1.36
RTF1-202ENST00000462276 hADV29S1A0JD25 119 aa6.54□□□□□ -1.36
RTF1-202ENST00000462276 H3BQ85 93 aa6.54□□□□□ -1.36
RTF1-202ENST00000462276 TRACP01848 142 aa6.53□□□□□ -1.36
RTF1-202ENST00000462276 PRLHP81277 87 aa6.53□□□□□ -1.36
RTF1-202ENST00000462276 ATXN8Q156A1 80 aa6.53□□□□□ -1.36
RTF1-202ENST00000462276 OCIAD2Q56VL3 154 aa6.53□□□□□ -1.36
RTF1-202ENST00000462276 LST1O00453 97 aa6.52□□□□□ -1.37
RTF1-202ENST00000462276 SPINK6Q6UWN8 80 aa6.52□□□□□ -1.37
RTF1-202ENST00000462276 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.52□□□□□ -1.37
RTF1-202ENST00000462276 Q8N1X5 172 aa6.52□□□□□ -1.37
RTF1-202ENST00000462276 NAA38Q9BRA0 125 aaKnown RBP6.52□□□□□ -1.37
RTF1-202ENST00000462276 Q9BRP9 147 aa6.52□□□□□ -1.37
RTF1-202ENST00000462276 HIGD2AQ9BW72 106 aa6.52□□□□□ -1.37
RTF1-202ENST00000462276 ZNF706Q9Y5V0 76 aaPredicted RBP6.52□□□□□ -1.37
RTF1-202ENST00000462276 HERC1Q15751 4861 aa6.52□□□□□ -1.37
RTF1-202ENST00000462276 FAT1Q14517 4588 aa6.51□□□□□ -1.37
RTF1-202ENST00000462276 DNAL4O96015 105 aa6.51□□□□□ -1.37
RTF1-202ENST00000462276 SMCR5Q8TEV8 140 aa6.51□□□□□ -1.37
RTF1-202ENST00000462276 GTF2H5Q6ZYL4 71 aa6.5□□□□□ -1.37
RTF1-202ENST00000462276 PPDPFLQ8WWR9 84 aa6.5□□□□□ -1.37
RTF1-202ENST00000462276 CLEC2BQ92478 149 aa6.5□□□□□ -1.37
RTF1-202ENST00000462276 KRTAP4-5Q9BYR2 181 aa6.5□□□□□ -1.37
RTF1-202ENST00000462276 SPCS1Q9Y6A9 102 aa6.5□□□□□ -1.37
RTF1-202ENST00000462276 TCL1BO95988 128 aa6.49□□□□□ -1.37
RTF1-202ENST00000462276 FAM218AQ96MZ4 157 aa6.49□□□□□ -1.37
RTF1-202ENST00000462276 VPS13BQ7Z7G8 4022 aa6.48□□□□□ -1.37
RTF1-202ENST00000462276 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
RTF1-202ENST00000462276 Q5VSD8 79 aa6.48□□□□□ -1.37
RTF1-202ENST00000462276 IGLV5-48A0A075B6I7 105 aa6.47□□□□□ -1.37
RTF1-202ENST00000462276 ERC2-IT1O76042 136 aa6.47□□□□□ -1.37
RTF1-202ENST00000462276 LCE2CQ5TA81 110 aa6.47□□□□□ -1.37
RTF1-202ENST00000462276 Q6ZQY7 126 aa6.47□□□□□ -1.37
RTF1-202ENST00000462276 TEX49A0A1B0GTD5 131 aa6.46□□□□□ -1.38
RTF1-202ENST00000462276 K7EP34 96 aa6.46□□□□□ -1.38
RTF1-202ENST00000462276 TMEM256-PLSCR3K7ERE1 68 aa6.46□□□□□ -1.38
RTF1-202ENST00000462276 SPRR1BP22528 89 aa6.46□□□□□ -1.38
RTF1-202ENST00000462276 ORMDL1Q9P0S3 153 aa6.46□□□□□ -1.38
RTF1-202ENST00000462276 SPRR4Q96PI1 79 aa6.45□□□□□ -1.38
RTF1-202ENST00000462276 SRRM2Q9UQ35 2752 aaKnown RBP6.45□□□□□ -1.38
RTF1-202ENST00000462276 H3BMG7 143 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms