RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 H3BRM9 83 aa2.96□□□□□ -1.94
CSMD3-205ENST00000462254 K7ERU9 68 aa2.96□□□□□ -1.94
CSMD3-205ENST00000462254 COX7A2LO14548 114 aa2.96□□□□□ -1.94
CSMD3-205ENST00000462254 LEPROTO15243 131 aa2.96□□□□□ -1.94
CSMD3-205ENST00000462254 WFDC2Q14508 124 aa2.96□□□□□ -1.94
CSMD3-205ENST00000462254 ANKRD29Q8N6D5 301 aa2.96□□□□□ -1.94
CSMD3-205ENST00000462254 RMI2Q96E14 147 aa2.96□□□□□ -1.94
CSMD3-205ENST00000462254 SNHG12Q9BXW3 62 aa2.96□□□□□ -1.94
CSMD3-205ENST00000462254 UQCR10Q9UDW1 63 aa2.96□□□□□ -1.94
CSMD3-205ENST00000462254 FRAS1Q86XX4 4008 aa2.95□□□□□ -1.94
CSMD3-205ENST00000462254 SACSQ9NZJ4 4579 aa2.95□□□□□ -1.94
CSMD3-205ENST00000462254 J3QQQ9 107 aa2.95□□□□□ -1.94
CSMD3-205ENST00000462254 LECT2O14960 151 aa2.95□□□□□ -1.94
CSMD3-205ENST00000462254 SYCNQ0VAF6 134 aa2.95□□□□□ -1.94
CSMD3-205ENST00000462254 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
CSMD3-205ENST00000462254 KRTAP5-11Q6L8G4 156 aa2.95□□□□□ -1.94
CSMD3-205ENST00000462254 Q8IZM0 81 aa2.95□□□□□ -1.94
CSMD3-205ENST00000462254 COX7B2Q8TF08 81 aa2.95□□□□□ -1.94
CSMD3-205ENST00000462254 PLEKHB2Q96CS7 222 aa2.95□□□□□ -1.94
CSMD3-205ENST00000462254 LINC00526Q96FQ7 95 aa2.95□□□□□ -1.94
CSMD3-205ENST00000462254 TOMM7Q9P0U1 55 aa2.95□□□□□ -1.94
CSMD3-205ENST00000462254 GVQW2A0A096LPI5 108 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-205ENST00000462254 LRCOL1A6NCL2 159 aa2.94□□□□□ -1.94
CSMD3-205ENST00000462254 PSCAO43653 123 aa2.94□□□□□ -1.94
CSMD3-205ENST00000462254 COX8AP10176 69 aa2.94□□□□□ -1.94
CSMD3-205ENST00000462254 LGALS3P17931 250 aaKnown RBP2.94□□□□□ -1.94
CSMD3-205ENST00000462254 SPAG11BQ08648 103 aa2.94□□□□□ -1.94
CSMD3-205ENST00000462254 C1orf134Q5TEV5 83 aa2.94□□□□□ -1.94
CSMD3-205ENST00000462254 C2orf82Q6UX34 121 aa2.94□□□□□ -1.94
CSMD3-205ENST00000462254 ZNF625Q96I27 306 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-205ENST00000462254 VPS25Q9BRG1 176 aa2.94□□□□□ -1.94
CSMD3-205ENST00000462254 MYMXA0A1B0GTQ4 84 aa2.93□□□□□ -1.94
CSMD3-205ENST00000462254 ZNF815PA8K554 130 aa2.93□□□□□ -1.94
CSMD3-205ENST00000462254 NDUFA1O15239 70 aa2.93□□□□□ -1.94
CSMD3-205ENST00000462254 RTL8CO15255 209 aa2.93□□□□□ -1.94
CSMD3-205ENST00000462254 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
CSMD3-205ENST00000462254 SLC25A34Q6PIV7 304 aa2.93□□□□□ -1.94
CSMD3-205ENST00000462254 C2orf91Q6ZV80 131 aa2.93□□□□□ -1.94
CSMD3-205ENST00000462254 CIRBP-AS1Q8TBR5 109 aa2.93□□□□□ -1.94
CSMD3-205ENST00000462254 NDUFA12Q9UI09 145 aa2.93□□□□□ -1.94
CSMD3-205ENST00000462254 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-205ENST00000462254 A0A087WTM6 91 aa2.92□□□□□ -1.94
CSMD3-205ENST00000462254 NDUFC2O95298 119 aa2.92□□□□□ -1.94
CSMD3-205ENST00000462254 C9orf116Q5BN46 136 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-205ENST00000462254 UNQ6190/PRO20217Q6UXQ8 127 aa2.92□□□□□ -1.94
CSMD3-205ENST00000462254 GTF2H5Q6ZYL4 71 aa2.92□□□□□ -1.94
CSMD3-205ENST00000462254 C6orf48Q9UBA6 75 aa2.92□□□□□ -1.94
CSMD3-205ENST00000462254 DNAH2Q9P225 4427 aa2.92□□□□□ -1.94
CSMD3-205ENST00000462254 DNAH17Q9UFH2 4485 aa2.91□□□□□ -1.94
CSMD3-205ENST00000462254 RYR2Q92736 4967 aa2.91□□□□□ -1.94
CSMD3-205ENST00000462254 A8MUN3 132 aa2.91□□□□□ -1.94
CSMD3-205ENST00000462254 J3QR89 54 aa2.91□□□□□ -1.94
CSMD3-205ENST00000462254 LST1O00453 97 aa2.91□□□□□ -1.94
CSMD3-205ENST00000462254 SMIM13P0DJ93 91 aa2.91□□□□□ -1.94
CSMD3-205ENST00000462254 FUSP35637 526 aaKnown RBP eCLIP2.91□□□□□ -1.94
CSMD3-205ENST00000462254 CKS1BP61024 79 aa2.91□□□□□ -1.94
CSMD3-205ENST00000462254 Q8N814 137 aa2.91□□□□□ -1.94
CSMD3-205ENST00000462254 CARD19Q96LW7 228 aa2.91□□□□□ -1.94
CSMD3-205ENST00000462254 KMT2CQ8NEZ4 4911 aaKnown RBP2.9□□□□□ -1.94
CSMD3-205ENST00000462254 TRBV30A0A0K0K1B3 111 aa2.9□□□□□ -1.95
CSMD3-205ENST00000462254 CNBPP62633 177 aaKnown RBP2.9□□□□□ -1.95
CSMD3-205ENST00000462254 MEIG1Q5JSS6 88 aa2.9□□□□□ -1.95
CSMD3-205ENST00000462254 SFTA2Q6UW10 78 aa2.9□□□□□ -1.95
CSMD3-205ENST00000462254 DAND5Q8N907 189 aa2.9□□□□□ -1.95
CSMD3-205ENST00000462254 HIGD1BQ9P298 99 aa2.9□□□□□ -1.95
CSMD3-205ENST00000462254 ERG28Q9UKR5 140 aa2.9□□□□□ -1.95
CSMD3-205ENST00000462254 K7ERS5 55 aa2.89□□□□□ -1.95
CSMD3-205ENST00000462254 TIMM17BO60830 172 aa2.89□□□□□ -1.95
CSMD3-205ENST00000462254 LINC00158P58513 81 aa2.89□□□□□ -1.95
CSMD3-205ENST00000462254 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
CSMD3-205ENST00000462254 NPC2P61916 151 aa2.89□□□□□ -1.95
CSMD3-205ENST00000462254 OCIAD2Q56VL3 154 aa2.89□□□□□ -1.95
CSMD3-205ENST00000462254 SOSTDC1Q6X4U4 206 aa2.89□□□□□ -1.95
CSMD3-205ENST00000462254 SCXQ7RTU7 201 aa2.89□□□□□ -1.95
CSMD3-205ENST00000462254 MIR7-3HGQ8N6C7 128 aa2.89□□□□□ -1.95
CSMD3-205ENST00000462254 C9orf163Q8N9P6 203 aa2.89□□□□□ -1.95
CSMD3-205ENST00000462254 SPANXDQ9BXN6 97 aa2.89□□□□□ -1.95
CSMD3-205ENST00000462254 SPANXCQ9NY87 97 aa2.89□□□□□ -1.95
CSMD3-205ENST00000462254 A0A096LNI7 61 aa2.88□□□□□ -1.95
CSMD3-205ENST00000462254 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.88□□□□□ -1.95
CSMD3-205ENST00000462254 A0A1B0GW54 56 aa2.88□□□□□ -1.95
CSMD3-205ENST00000462254 FXYD2P54710 66 aa2.88□□□□□ -1.95
CSMD3-205ENST00000462254 COX17Q14061 63 aa2.88□□□□□ -1.95
CSMD3-205ENST00000462254 Q6Q795 121 aa2.88□□□□□ -1.95
CSMD3-205ENST00000462254 Q8NDZ9 215 aa2.88□□□□□ -1.95
CSMD3-205ENST00000462254 PKD1P98161 4303 aa2.88□□□□□ -1.95
CSMD3-205ENST00000462254 DNAH11Q96DT5 4516 aa2.88□□□□□ -1.95
CSMD3-205ENST00000462254 FAT2Q9NYQ8 4349 aa2.87□□□□□ -1.95
CSMD3-205ENST00000462254 LOC107984156A0A0G2JMH3 177 aa2.87□□□□□ -1.95
CSMD3-205ENST00000462254 LOC107984640A0A0U1RRK4 108 aa2.87□□□□□ -1.95
CSMD3-205ENST00000462254 A0A1B0GVY2 172 aa2.87□□□□□ -1.95
CSMD3-205ENST00000462254 PANO1I0J062 215 aa2.87□□□□□ -1.95
CSMD3-205ENST00000462254 HINT1P49773 126 aaPredicted RBP2.87□□□□□ -1.95
CSMD3-205ENST00000462254 HSD52Q0P140 79 aa2.87□□□□□ -1.95
CSMD3-205ENST00000462254 CIRBPQ14011 172 aaKnown RBP2.87□□□□□ -1.95
CSMD3-205ENST00000462254 SDIM1Q6ZPB5 146 aa2.87□□□□□ -1.95
CSMD3-205ENST00000462254 MUSTN1Q8IVN3 82 aa2.87□□□□□ -1.95
CSMD3-205ENST00000462254 ARL17AQ8IVW1 177 aa2.87□□□□□ -1.95
CSMD3-205ENST00000462254 LINC00308Q8TCZ7 52 aa2.87□□□□□ -1.95
CSMD3-205ENST00000462254 XAGE1AQ9HD64 81 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms